Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2121c_(hisG)_2379814_2380668
DateMon Aug 5 13:25:24 BST 2019
Unique Job IDb0a2cf660437b079
SequenceMLRVAVPNKG ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:60.805 Y:55.957 Z:69.292
Model (left) based on template c1nh7A_
Top template information
PDB header:transferase
Chain: A: PDB Molecule:atp phosphoribosyltransferase;
PDBTitle: atp phosphoribosyltransferase (atp-prtase) from mycobacterium2 tuberculosis
Confidence and coverage
Confidence:100.0% Coverage: 96%
274 residues ( 96% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c1nh7A_
100.0 99
PDB header:transferase
Chain: A: PDB Molecule:atp phosphoribosyltransferase;
PDBTitle: atp phosphoribosyltransferase (atp-prtase) from mycobacterium2 tuberculosis
2c4yb5B_
100.0 30
PDB header:transferase
Chain: B: PDB Molecule:atp phosphoribosyltransferase;
PDBTitle: adenosine triphosphate phosphoribosyltransferase from campylobacter2 jejuni in complex with the allosteric inhibitor histidine
3c2vd3B_
100.0 32
PDB header:transferase
Chain: B: PDB Molecule:atp phosphoribosyltransferase;
PDBTitle: the structure of histidine inhibited hisg from2 methanobacterium thermoautotrophicum
4c1q1kA_
100.0 32
PDB header:transferase
Chain: A: PDB Molecule:atp phosphoribosyltransferase;
PDBTitle: structure of atp-phosphoribosyltransferase from e. coli complexed with2 pr-atp
5c6czlA_
100.0 28
PDB header:transferase
Chain: A: PDB Molecule:atp phosphoribosyltransferase catalytic subunit;
PDBTitle: crystal structure of medicago truncatula atp-phosphoribosyltransferase2 in relaxed form
6d1nh8a1
100.0 100
Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
7d1h3da1
100.0 32
Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
8c2vd2A_
100.0 30
PDB header:transferase
Chain: A: PDB Molecule:atp phosphoribosyltransferase;
PDBTitle: the crystal structure of hisg from b. subtilis
9c5m8hH_
100.0 28
PDB header:transferase
Chain: H: PDB Molecule:atp phosphoribosyltransferase;
PDBTitle: atp phosphoribosyltransferase (hiszg atpprt) from psychrobacter2 arcticus
10d1ve4a1
100.0 30
Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
11d1z7me1
100.0 25
Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
12d1o63a_
100.0 25
Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
13d1nh8a2
100.0 100
Fold:Ferredoxin-like
Superfamily:GlnB-like
Family:ATP phosphoribosyltransferase (ATP-PRTase, HisG), regulatory C-terminal domain
14d1h3da2
99.8 31
Fold:Ferredoxin-like
Superfamily:GlnB-like
Family:ATP phosphoribosyltransferase (ATP-PRTase, HisG), regulatory C-terminal domain
15c3ix1A_
97.4 19
PDB header:biosynthetic protein
Chain: A: PDB Molecule:n-formyl-4-amino-5-aminomethyl-2-methylpyrimidine binding
PDBTitle: periplasmic n-formyl-4-amino-5-aminomethyl-2-methylpyrimidine binding2 protein from bacillus halodurans
16c4h67D_
97.2 16
PDB header:transferase
Chain: D: PDB Molecule:pyrimidine precursor biosynthesis enzyme thi5;
PDBTitle: crystal structure of hmp synthase thi5 from s. cerevisiae
17c3ix1B_
97.1 19
PDB header:biosynthetic protein
Chain: B: PDB Molecule:n-formyl-4-amino-5-aminomethyl-2-methylpyrimidine binding
PDBTitle: periplasmic n-formyl-4-amino-5-aminomethyl-2-methylpyrimidine binding2 protein from bacillus halodurans
18c4nmyA_
97.1 14
PDB header:transport protein
Chain: A: PDB Molecule:abc-type transport system, extracellular solute-binding
PDBTitle: crystal structure of the thiamin-bound form of substrate-binding2 protein of abc transporter from clostridium difficile
19c4esxA_
97.0 16
PDB header:transferase
Chain: A: PDB Molecule:pyrimidine biosynthesis enzyme thi13;
PDBTitle: crystal structure of c. albicans thi5 complexed with plp
20c3qslA_
97.0 15
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative exported protein;
PDBTitle: structure of cae31940 from bordetella bronchiseptica rb50
21c3uifA_
not modelled 96.8 18
PDB header:transport protein
Chain: A: PDB Molecule:sulfonate abc transporter, periplasmic sulfonate-binding
PDBTitle: crystal structure of putative sulfonate abc transporter, periplasmic2 sulfonate-binding protein ssua from methylobacillus flagellatus kt
22c5ub6B_
not modelled 96.7 16
PDB header:metal binding protein
Chain: B: PDB Molecule:phosphate-binding protein;
PDBTitle: xac2383 from xanthomonas citri bound to pyrophosphate
23c1p99A_
not modelled 96.5 13
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein pg110;
PDBTitle: 1.7a crystal structure of protein pg110 from staphylococcus aureus
24d1p99a_
not modelled 96.5 13
Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
25c3e4rA_
not modelled 96.2 19
PDB header:transport protein
Chain: A: PDB Molecule:nitrate transport protein;
PDBTitle: crystal structure of the alkanesulfonate binding protein2 (ssua) from the phytopathogenic bacteria xanthomonas3 axonopodis pv. citri bound to hepes
26c3un6A_
not modelled 96.1 11
PDB header:unknown function
Chain: A: PDB Molecule:hypothetical protein saouhsc_00137;
PDBTitle: 2.0 angstrom crystal structure of ligand binding component of abc-type2 import system from staphylococcus aureus with zinc bound
27c6h2tA_
not modelled 96.1 12
PDB header:signaling protein
Chain: A: PDB Molecule:probable glutamine-binding lipoprotein glnh (glnbp);
PDBTitle: glnh bound to glu, mycobacterium tuberculosis
28d1zbma1
not modelled 96.0 13
Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
29c3hn0A_
not modelled 95.7 14
PDB header:transport protein
Chain: A: PDB Molecule:nitrate transport protein;
PDBTitle: crystal structure of an abc transporter (bdi_1369) from2 parabacteroides distasonis at 1.75 a resolution
30c6esvA_
not modelled 95.4 13
PDB header:signaling protein
Chain: A: PDB Molecule:putative periplasmic phosphite-binding-like protein (pbl)
PDBTitle: structure of the phosphate-bound form of aiox from rhizobium sp. str.2 nt-26
31c5me4A_
not modelled 95.2 13
PDB header:transport protein
Chain: A: PDB Molecule:probable phosphite transport system-binding protein htxb;
PDBTitle: the structure of htxb from pseudomonas stutzeri in complex with2 hypophosphite to 1.52 a resolution
32c4z9nB_
not modelled 95.1 17
PDB header:transport protein
Chain: B: PDB Molecule:amino acid abc transporter, periplasmic amino acid-binding
PDBTitle: abc transporter / periplasmic binding protein from brucella ovis with2 glutathione bound
33d2czla1
not modelled 94.6 14
Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
34c2de4B_
not modelled 93.7 18
PDB header:hydrolase
Chain: B: PDB Molecule:dibenzothiophene desulfurization enzyme b;
PDBTitle: crystal structure of dszb c27s mutant in complex with biphenyl-2-2 sulfinic acid
35c2x26A_
not modelled 93.5 18
PDB header:transport protein
Chain: A: PDB Molecule:periplasmic aliphatic sulphonates-binding protein;
PDBTitle: crystal structure of the periplasmic aliphatic sulphonate binding2 protein ssua from escherichia coli
36c5kuhB_
not modelled 93.3 9
PDB header:signaling protein
Chain: B: PDB Molecule:glutamate receptor ionotropic, kainate 2;
PDBTitle: gluk2em with ly466195
37c3p7iA_
not modelled 93.1 12
PDB header:transport protein
Chain: A: PDB Molecule:phnd, subunit of alkylphosphonate abc transporter;
PDBTitle: crystal structure of escherichia coli phnd in complex with 2-2 aminoethyl phosphonate
38c2x7pA_
not modelled 92.8 14
PDB header:unknown function
Chain: A: PDB Molecule:possible thiamine biosynthesis enzyme;
PDBTitle: the conserved candida albicans ca3427 gene product defines a new2 family of proteins exhibiting the generic periplasmic binding3 protein structural fold
39d2nxoa1
not modelled 91.9 14
Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
40c5o2kE_
not modelled 91.5 16
PDB header:transport protein
Chain: E: PDB Molecule:probable phosphite transport system-binding protein ptxb;
PDBTitle: native apo-structure of pseudomonas stutzeri ptxb to 2.1 a resolution
41c4p56C_
not modelled 91.5 17
PDB header:solute-binding protein
Chain: C: PDB Molecule:putative extracellular solute-binding protein;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 bordetella bronchiseptica, target efi-510038 (bb2442), with bound3 (r)-mandelate and (s)-mandelate
42c2rd5D_
not modelled 91.5 23
PDB header:protein binding
Chain: D: PDB Molecule:pii protein;
PDBTitle: structural basis for the regulation of n-acetylglutamate kinase by pii2 in arabidopsis thaliana
43c4pp0B_
not modelled 90.4 15
PDB header:transport protein
Chain: B: PDB Molecule:nopaline-binding periplasmic protein;
PDBTitle: structure of the pbp noct-m117n in complex with pyronopaline
44c5lv1C_
not modelled 89.8 13
PDB header:periplasmic binding protein
Chain: C: PDB Molecule:ptxb;
PDBTitle: 2.12 a resolution structure of ptxb from prochlorococcus marinus (mit2 9301) in complex with phosphite
45c4n6dA_
not modelled 89.7 16
PDB header:transport protein
Chain: A: PDB Molecule:trap dicarboxylate transporter-dctp subunit;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 desulfovibrio salexigens dsm2638 (desal_3247), target efi-510112,3 phased with i3c, open complex, c-terminus of symmetry mate bound in4 ligand binding site
46c5jvbB_
not modelled 88.9 16
PDB header:transport protein
Chain: B: PDB Molecule:phosphonate abc transporter, periplasmic phosphonate-
PDBTitle: 1.95a resolution structure of ptxb from trichodesmium erythraeum2 ims101 in complex with phosphite
47c3n5lA_
not modelled 88.9 13
PDB header:transport protein
Chain: A: PDB Molecule:binding protein component of abc phosphonate transporter;
PDBTitle: crystal structure of a binding protein component of abc phosphonate2 transporter (pa3383) from pseudomonas aeruginosa at 1.97 a resolution
48c4ozlA_
not modelled 88.9 15
PDB header:signaling protein
Chain: A: PDB Molecule:nitrogen regulatory protein p-ii;
PDBTitle: glnk2 from haloferax mediterranei complexed with amp
49c4n8yA_
not modelled 88.8 17
PDB header:transport protein
Chain: A: PDB Molecule:putative trap-type c4-dicarboxylate transport system,
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 bradyrhizobium sp. btai1 b (bbta_0128), target efi-5100563 (bbta_0128), complex with alpha/beta-d-galacturonate
50c4q0cA_
not modelled 88.6 17
PDB header:transferase
Chain: A: PDB Molecule:virulence sensor protein bvgs;
PDBTitle: 3.1 a resolution crystal structure of the b. pertussis bvgs2 periplasmic domain
51c3kzgB_
not modelled 88.5 13
PDB header:transport protein
Chain: B: PDB Molecule:arginine 3rd transport system periplasmic binding
PDBTitle: crystal structure of an arginine 3rd transport system2 periplasmic binding protein from legionella pneumophila
52c4mncA_
not modelled 88.4 11
PDB header:transport protein
Chain: A: PDB Molecule:trap dicarboxylate transporter-dctp subunit;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 polaromonas sp. js666 (bpro_4736), target efi-510156, with bound3 benzoyl formate, space group p21
53c4p1eA_
not modelled 87.9 12
PDB header:transport protein
Chain: A: PDB Molecule:trap dicarboxylate transporter, dctp subunit;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 escherichia fergusonii (efer_1530), target efi-510119, apo open3 structure, phased with iodide
54c5lq8A_
not modelled 87.9 13
PDB header:periplasmic binding protein
Chain: A: PDB Molecule:putative phosphonate binding protein for abc transporter;
PDBTitle: 1.52 a resolution structure of phnd1 from prochlorococcus marinus (mit2 9301) in complex with methylphosphonate
55c4p1lA_
not modelled 87.5 18
PDB header:transport protein
Chain: A: PDB Molecule:trap dicarboxylate transporter, dctp subunit;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 chromohalobacter salexigens dsm 3043 (csal_2479), target efi-510085,3 with bound d-glucuronate, spg i213
56c4napD_
not modelled 87.1 17
PDB header:transport protein
Chain: D: PDB Molecule:extracellular solute-binding protein, family 7;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 desulfovibrio alaskensis g20 (dde_0634), target efi-510102, with3 bound d-tryptophan
57c4xeqC_
not modelled 87.0 14
PDB header:transport protein
Chain: C: PDB Molecule:trap dicarboxylate transporter, dctp subunit;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 desulfovibrio vulgaris (deval_0042, target efi-510114) bound to3 copurified (r)-pantoic acid
58c2pfzA_
not modelled 86.9 15
PDB header:transport protein
Chain: A: PDB Molecule:putative exported protein;
PDBTitle: crystal structure of dctp6, a bordetella pertussis2 extracytoplasmic solute receptor binding pyroglutamic acid
59c4usiC_
not modelled 86.8 13
PDB header:signaling protein
Chain: C: PDB Molecule:nitrogen regulatory protein pii;
PDBTitle: nitrogen regulatory protein pii from chlamydomonas2 reinhardtii in complex with mgatp and 2-oxoglutarate
60c4de8A_
not modelled 85.6 22
PDB header:membrane protein
Chain: A: PDB Molecule:cps2a;
PDBTitle: lytr-cps2a-psr family protein with bound octaprenyl monophosphate2 lipid
61c6jf1A_
not modelled 85.6 15
PDB header:transport protein
Chain: A: PDB Molecule:lipoprotein;
PDBTitle: crystal structure of the substrate binding protein of a methionine2 transporter from streptococcus pneumoniae
62c4pakA_
not modelled 84.9 14
PDB header:solute-binding protein
Chain: A: PDB Molecule:trap dicarboxylate transporter, dctp subunit;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 verminephrobacter eiseniae ef01-2 (veis_3954, target efi-510324) a3 nephridial symbiont of the earthworm eisenia foetida, bound to (r)-4 pantoic acid
63c3tmgA_
not modelled 84.8 14
PDB header:transport protein
Chain: A: PDB Molecule:glycine betaine, l-proline abc transporter,
PDBTitle: crystal structure of glycine betaine, l-proline abc transporter,2 glycine/betaine/l-proline-binding protein (prox) from borrelia3 burgdorferi
64c3l7pA_
not modelled 84.7 13
PDB header:transcription
Chain: A: PDB Molecule:putative nitrogen regulatory protein pii;
PDBTitle: crystal structure of smu.1657c, putative nitrogen regulatory protein2 pii from streptococcus mutans
65c4mx6A_
not modelled 84.2 10
PDB header:transport protein
Chain: A: PDB Molecule:trap-type c4-dicarboxylate:h+ symport system substrate-
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 shewanella oneidensis (so_3134), target efi-510275, with bound3 succinate
66c3fxbB_
not modelled 83.7 12
PDB header:transport protein
Chain: B: PDB Molecule:trap dicarboxylate transporter, dctp subunit;
PDBTitle: crystal structure of the ectoine-binding protein ueha
67c4ovsB_
not modelled 83.5 12
PDB header:solute-binding protein
Chain: B: PDB Molecule:trap dicarboxylate transporter, dctp subunit;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 sulfurospirillum deleyianum dsm 6946 (sdel_0447), target efi-510309,3 with bound succinate
68c4pe3A_
not modelled 83.2 20
PDB header:solute-binding protein
Chain: A: PDB Molecule:trap dicarboxylate transporter-dctp subunit;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 rhodobacter sphaeroides (rsph17029_3620, target efi-510199), apo open3 structure
69c4r25A_
not modelled 82.9 16
PDB header:transcription
Chain: A: PDB Molecule:nitrogen regulatory pii-like protein;
PDBTitle: structure of b. subtilis glnk
70c4pfbA_
not modelled 82.8 16
PDB header:transport protein
Chain: A: PDB Molecule:c4-dicarboxylate-binding protein;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 fusobacterium nucleatun (fn1258, target efi-510120) with bound sn-3 glycerol-3-phosphate
71c3bzqA_
not modelled 82.3 19
PDB header:signaling protein/transcription
Chain: A: PDB Molecule:nitrogen regulatory protein p-ii;
PDBTitle: high resolution crystal structure of nitrogen regulatory protein2 (rv2919c) of mycobacterium tuberculosis
72c4ln5A_
not modelled 81.7 16
PDB header:transport protein
Chain: A: PDB Molecule:trap dicarboxylate transporter, dctp subunit;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 burkholderia ambifaria (bamb_6123), target efi-510059, with bound3 glycerol and chloride ion
73c4nn3A_
not modelled 80.5 16
PDB header:transport protein
Chain: A: PDB Molecule:trap dicarboxylate transporter, dctp subunit;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 desulfovibrio salexigens (desal_2161), target efi-510109, with bound3 orotic acid
74c4mcoC_
not modelled 79.9 16
PDB header:transport protein
Chain: C: PDB Molecule:trap dicarboxylate transporter-dctp subunit;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 rhodoferax ferrireducens (rfer_1840), target efi-510211, with bound3 malonate
75d1qy7a_
not modelled 79.9 18
Fold:Ferredoxin-like
Superfamily:GlnB-like
Family:Prokaryotic signal transducing protein
76c3mhyC_
not modelled 79.6 11
PDB header:signaling protein
Chain: C: PDB Molecule:pii-like protein pz;
PDBTitle: a new pii protein structure
77c4xfeA_
not modelled 79.3 15
PDB header:transport protein
Chain: A: PDB Molecule:trap dicarboxylate transporter subunit dctp;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 pseudomonas putida f1 (pput_1203), target efi-500184, with bound d-3 glucuronate
78c4pddA_
not modelled 79.2 11
PDB header:solute-binding protein
Chain: A: PDB Molecule:trap dicarboxylate transporter, dctp subunit;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 polaromonas sp js666 (bpro_0088, target efi-510167) bound to d-3 erythronate
79c2j9dG_
not modelled 79.1 11
PDB header:membrane transport
Chain: G: PDB Molecule:hypothetical nitrogen regulatory pii-like
PDBTitle: structure of glnk1 with bound effectors indicates2 regulatory mechanism for ammonia uptake
80c2hzkB_
not modelled 78.8 20
PDB header:ligand binding, transport protein
Chain: B: PDB Molecule:trap-t family sorbitol/mannitol transporter, periplasmic
PDBTitle: crystal structures of a sodium-alpha-keto acid binding subunit from a2 trap transporter in its open form
81c3b50A_
not modelled 78.7 13
PDB header:transport protein
Chain: A: PDB Molecule:sialic acid-binding periplasmic protein siap;
PDBTitle: structure of h. influenzae sialic acid binding protein2 bound to neu5ac.
82d2ns1b1
not modelled 78.5 9
Fold:Ferredoxin-like
Superfamily:GlnB-like
Family:Prokaryotic signal transducing protein
83c5l2eB_
not modelled 77.8 13
PDB header:protein binding
Chain: B: PDB Molecule:glutamate receptor ionotropic, delta-2,glutamate receptor
PDBTitle: crystal structure of rat glutamate receptor delta-2 extracellular2 domain
84c4n5wB_
not modelled 77.6 16
PDB header:transport protein
Chain: B: PDB Molecule:twin-arginine translocation pathway signal;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 chromohalobacter salexigens dsm 3043 (csal_0678), target efi-501078,3 with bound 1,2-ethanediol
85c4pbqC_
not modelled 77.1 15
PDB header:solute-binding protein
Chain: C: PDB Molecule:putative trap periplasmic solute binding protein;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 haemophilus influenzae rdaw (hicg_00826, target efi-510123) with3 bound l-gulonate
86c2rc9A_
not modelled 76.6 11
PDB header:membrane protein
Chain: A: PDB Molecule:glutamate [nmda] receptor subunit 3a;
PDBTitle: crystal structure of the nr3a ligand binding core complex with acpc at2 1.96 angstrom resolution
87c4pf6A_
not modelled 76.5 15
PDB header:transport protein
Chain: A: PDB Molecule:c4-dicarboxylate-binding protein;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 roseobacter denitrificans (rd1_0742, target efi-510239) with bound 3-3 deoxy-d-manno-oct-2-ulosonic acid (kdo)
88d2piia_
not modelled 76.4 15
Fold:Ferredoxin-like
Superfamily:GlnB-like
Family:Prokaryotic signal transducing protein
89c4pbhA_
not modelled 76.1 18
PDB header:solute-binding protein
Chain: A: PDB Molecule:trap dicarboxylate transporter, dctp subunit, putative;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 ruegeria pomeroyi dss-3 (spo1773, target efi-510260) with bound3 benzoic acid
90c4f3pB_
not modelled 76.0 10
PDB header:transport protein
Chain: B: PDB Molecule:glutamine-binding periplasmic protein;
PDBTitle: crystal structure of a glutamine-binding periplasmic protein from2 burkholderia pseudomallei in complex with glutamine
91c4oanB_
not modelled 75.5 10
PDB header:membrane protein/protein transport
Chain: B: PDB Molecule:trap dicarboxylate transporter dctp subunit;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 rhodopseudomonas palustris haa2 (rpb_2686), target efi-510221, with3 density modeled as (s)-2-hydroxy-2-methyl-3-oxobutanoate ((s)-2-4 acetolactate)
92c3o8wA_
not modelled 75.4 9
PDB header:signaling protein
Chain: A: PDB Molecule:nitrogen regulatory protein p-ii (glnb-1);
PDBTitle: archaeoglobus fulgidus glnk1
93c5t0wA_
not modelled 74.9 13
PDB header:transport protein
Chain: A: PDB Molecule:anccdt-1;
PDBTitle: crystal structure of the ancestral amino acid-binding protein anccdt-2 1, a precursor of cyclohexadienyl dehydratase
94c4o8mA_
not modelled 74.3 13
PDB header:transport protein
Chain: A: PDB Molecule:trap dicarboxylate transporter, dctp subunit;
PDBTitle: crystal structure of a trap periplasmic solute binding protein2 actinobacillus succinogenes 130z, target efi-510004, with bound l-3 galactonate
95c5i7iB_
not modelled 73.8 15
PDB header:transport protein
Chain: B: PDB Molecule:trap solute binding protein;
PDBTitle: crystal structure of a marine metagenome trap solute binding protein2 specific for aromatic acid ligands (sorcerer ii global ocean sampling3 expedition, unidentified microbe, locus tag gos_1523157) in complex4 with co-crystallized 3-hydroxybenzoate
96c4o94B_
not modelled 73.4 11
PDB header:transport protein
Chain: B: PDB Molecule:trap dicarboxylate transporter dctp subunit;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 rhodopseudomonas palustris haa2 (rpb_3329), target efi-510223, with3 bound succinate
97d1vm0a_
not modelled 73.1 26
Fold:IF3-like
Superfamily:AlbA-like
Family:Hypothetical protein At2g34160
98c2ylnA_
not modelled 72.6 10
PDB header:transport protein
Chain: A: PDB Molecule:putative abc transporter, periplasmic binding protein,
PDBTitle: crystal structure of the l-cystine solute receptor of2 neisseria gonorrhoeae in the closed conformation
99d1hwua_
not modelled 72.4 12
Fold:Ferredoxin-like
Superfamily:GlnB-like
Family:Prokaryotic signal transducing protein
100c4nq8B_
not modelled 72.4 14
PDB header:protein transport
Chain: B: PDB Molecule:putative periplasmic substrate-binding transport protein;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 bordetella bronchispeptica (bb3421), target efi-510039, with density3 modeled as pantoate
101c4n4uA_
not modelled 71.8 15
PDB header:transport protein
Chain: A: PDB Molecule:putative abc transporter periplasmic solute-binding
PDBTitle: crystal structure of abc transporter solute binding protein bb07192 from bordetella bronchiseptica rb50, target efi-510049
102c3ir1F_
not modelled 71.4 13
PDB header:protein binding
Chain: F: PDB Molecule:outer membrane lipoprotein gna1946;
PDBTitle: crystal structure of lipoprotein gna1946 from neisseria meningitidis
103c4p8bA_
not modelled 71.2 12
PDB header:transport protein
Chain: A: PDB Molecule:trap-type transporter, periplasmic component;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 ralstonia eutropha h16 (h16_a1328), target efi-510189, with bound3 (s)-2-hydroxy-2-methyl-3-oxobutanoate ((s)-2-acetolactate)
104c4petA_
not modelled 71.1 21
PDB header:solute-binding protein
Chain: A: PDB Molecule:extracellular solute-binding protein, family 7;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 colwellia psychrerythraea (cps_0129, target efi-510097) with bound3 calcium and pyruvate
105c3ncpD_
not modelled 70.7 17
PDB header:signaling protein
Chain: D: PDB Molecule:nitrogen regulatory protein p-ii (glnb-2);
PDBTitle: glnk2 from archaeoglobus fulgidus
106c3gxaA_
not modelled 70.2 12
PDB header:protein binding
Chain: A: PDB Molecule:outer membrane lipoprotein gna1946;
PDBTitle: crystal structure of gna1946
107d1ul3a_
not modelled 70.0 14
Fold:Ferredoxin-like
Superfamily:GlnB-like
Family:Prokaryotic signal transducing protein
108c4dddA_
not modelled 69.4 15
PDB header:immune system
Chain: A: PDB Molecule:immunogenic protein;
PDBTitle: crystal structure of an immunogenic protein from ehrlichia chaffeensis
109c3l6gA_
not modelled 69.0 15
PDB header:glycine betaine-binding protein
Chain: A: PDB Molecule:betaine abc transporter permease and substrate binding
PDBTitle: crystal structure of lactococcal opuac in its open conformation
110c4pfrA_
not modelled 68.7 16
PDB header:solute-binding protein
Chain: A: PDB Molecule:trap dicarboxylate transporter, dctp subunit;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 rhodobacter sphaeroides (rsph17029_3541, target efi-510203), apo open3 partially disordered
111c4ng7A_
not modelled 67.8 18
PDB header:transport protein
Chain: A: PDB Molecule:trap periplasmic solute binding protein;
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 citrobacter koseri (cko_04899), target efi-510094, apo, open3 structure
112c2q3vB_
not modelled 67.5 23
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:protein at2g34160;
PDBTitle: ensemble refinement of the protein crystal structure of gene product2 from arabidopsis thaliana at2g34160
113c3vvfA_
not modelled 66.1 14
PDB header:transport protein
Chain: A: PDB Molecule:amino acid abc transporter, binding protein;
PDBTitle: crystal structure of ttc0807 complexed with arginine
114c5tpiA_
not modelled 66.0 13
PDB header:hydrolase
Chain: A: PDB Molecule:putative transcriptional regulator (lysr family);
PDBTitle: 1.47 angstrom crystal structure of the c-terminal substrate binding2 domain of lysr family transcriptional regulator from klebsiella3 pneumoniae.
115c6mmvC_
not modelled 65.7 11
PDB header:transport protein
Chain: C: PDB Molecule:glutamate receptor ionotropic, nmda 1;
PDBTitle: triheteromeric nmda receptor glun1/glun2a/glun2a* extracellular domain2 in the '2-knuckle-asymmetric' conformation, in complex with glycine3 and glutamate, in the presence of 1 micromolar zinc chloride, and at4 ph 7.4
116c3ce8A_
not modelled 65.6 9
PDB header:unknown function
Chain: A: PDB Molecule:putative pii-like nitrogen regulatory protein;
PDBTitle: crystal structure of a duf3240 family protein (sbal_0098) from2 shewanella baltica os155 at 2.40 a resolution
117c4yicA_
not modelled 65.3 19
PDB header:transport protein
Chain: A: PDB Molecule:trap transporter solute binding protein;
PDBTitle: crystal structure of a trap transporter solute binding protein2 (ipr025997) from bordetella bronchiseptica rb50 (bb0280, target efi-3 500035) with bound picolinic acid
118c3gmgB_
not modelled 65.2 35
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein rv1825/mt1873;
PDBTitle: crystal structure of an uncharacterized conserved protein from2 mycobacterium tuberculosis
119c4pf8A_
not modelled 65.1 19
PDB header:transport protein
Chain: A: PDB Molecule:trap-t family transporter, dctp (periplasmic binding)
PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 sulfitobacter sp. nas-14.1 (target efi-510299) with bound beta-d-3 galacturonate
120d3c7bb2
not modelled 64.7 22
Fold:Ferredoxin-like
Superfamily:Nitrite/Sulfite reductase N-terminal domain-like
Family:DsrA/DsrB N-terminal-domain-like

Binding site prediction 

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