Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2128_(-)_2390093_2390296
DateMon Aug 5 13:25:24 BST 2019
Unique Job IDca61cf7f27ba434d
SequenceMLRRGESIIR ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:11.551 Y:12.185 Z:16.758
Model (left) based on template d1nkzb_
Top template information
Fold:Light-harvesting complex subunits
Superfamily:Light-harvesting complex subunits
Family:Light-harvesting complex subunits
Confidence and coverage
Confidence: 29.1% Coverage: 13%
9 residues ( 13% of your sequence) have been modelled with 29.1% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
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3D viewing
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Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d1nkzb_



29.1 67
Fold:Light-harvesting complex subunits
Superfamily:Light-harvesting complex subunits
Family:Light-harvesting complex subunits
2c5z1lL_



19.7 47
PDB header:protein fibril
Chain: L: PDB Molecule:flagellin;
PDBTitle: cryo-em structure of methanoccus maripaludis archaellum
3c6gcsc_



19.6 48
PDB header:oxidoreductase
Chain: C: PDB Molecule:49-kda protein (nucm);
PDBTitle: cryo-em structure of respiratory complex i from yarrowia lipolytica
4c5o4uK_



17.0 47
PDB header:cell adhesion
Chain: K: PDB Molecule:flagellin;
PDBTitle: the flagellin of pyrococcus furiosus
5d1jo5a_



14.5 50
Fold:Light-harvesting complex subunits
Superfamily:Light-harvesting complex subunits
Family:Light-harvesting complex subunits
6c5tfyJ_



13.7 35
PDB header:cell adhesion
Chain: J: PDB Molecule:flagellin;
PDBTitle: the archaeal flagellum of methanospirillum hungatei strain jf1.
7d1ijdb_



9.9 33
Fold:Light-harvesting complex subunits
Superfamily:Light-harvesting complex subunits
Family:Light-harvesting complex subunits
8c3arct_



7.7 39
PDB header:electron transport, photosynthesis
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: crystal structure of oxygen-evolving photosystem ii at 1.9 angstrom2 resolution
9d1y0ka1



5.8 60
Fold:Restriction endonuclease-like
Superfamily:Restriction endonuclease-like
Family:PA4535-like
10c6hwhX_



5.7 25
PDB header:electron transport
Chain: X: PDB Molecule:cytochrome c oxidase polypeptide 4;
PDBTitle: structure of a functional obligate respiratory supercomplex from2 mycobacterium smegmatis
11c2amwA_



5.4 28
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein ne2163;
PDBTitle: solution nmr structure of protein ne2163 from nitrosomonas europaea.2 northeast structural genomics consortium target net1.

Binding site prediction 

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below