Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2134c_(-)_2394658_2395245
DateMon Aug 5 13:25:25 BST 2019
Unique Job IDe9aac0a5300e70ca
SequenceMARAIHVFRT ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:21.927 Y:20.610 Z:16.309
Model (left) based on template c3w0fA_
Top template information
PDB header:hydrolase
Chain: A: PDB Molecule:endonuclease 8-like 3;
PDBTitle: crystal structure of mouse endonuclease viii-like 3 (mneil3)
Confidence and coverage
Confidence: 75.0% Coverage: 11%
21 residues ( 11% of your sequence) have been modelled with 75.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3w0fA_
75.0 24
PDB header:hydrolase
Chain: A: PDB Molecule:endonuclease 8-like 3;
PDBTitle: crystal structure of mouse endonuclease viii-like 3 (mneil3)
2c2f5qA_
75.0 29
PDB header:hydrolase/dna
Chain: A: PDB Molecule:formamidopyrimidine-dna glycosidase;
PDBTitle: catalytically inactive (e3q) mutm crosslinked to oxog:c2 containing dna cc2
3c6gjeA_
70.8 35
PDB header:protein transport
Chain: A: PDB Molecule:protein amnionless;
PDBTitle: structure of the amnionless(20-357)-cubilin(36-135) complex
4c2qgpA_
66.7 35
PDB header:hydrolase
Chain: A: PDB Molecule:hnh endonuclease;
PDBTitle: x-ray structure of the nhn endonuclease from geobacter2 metallireducens. northeast structural genomics consortium target3 gmr87.
5c1ee8A_
65.7 45
PDB header:dna binding protein
Chain: A: PDB Molecule:mutm (fpg) protein;
PDBTitle: crystal structure of mutm (fpg) protein from thermus thermophilus hb8
6c4o6hA_
63.5 26
PDB header:hydrolase
Chain: A: PDB Molecule:nucleoprotein;
PDBTitle: 2.8a crystal structure of lymphocytic choriomeningitis virus2 nucleoprotein c-terminal domain
7c6em4u_
57.9 30
PDB header:ribosome
Chain: U: PDB Molecule:
PDBTitle: state b architectural model (nsa1-tap flag-ytm1) - visualizing the2 assembly pathway of nucleolar pre-60s ribosomes
8d2qam01
57.5 35
Fold:Rubredoxin-like
Superfamily:Zn-binding ribosomal proteins
Family:Ribosomal protein L32p
9c3j65p_
57.4 29
PDB header:ribosome
Chain: P: PDB Molecule:60s ribosomal protein l5;
PDBTitle: arx1 pre-60s particle. this entry contains the r-proteins and2 biogenesis factors.
10c1s1iS_
56.6 14
PDB header:ribosome
Chain: S: PDB Molecule:60s ribosomal protein l24-a;
PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from yeast2 obtained by docking atomic models for rna and protein components into3 a 11.7 a cryo-em map. this file, 1s1i, contains 60s subunit. the 40s4 ribosomal subunit is in file 1s1h.
11c5an9G_
56.5 20
PDB header:translation
Chain: G: PDB Molecule:60s ribosomal protein l24;
PDBTitle: mechanism of eif6 release from the nascent 60s ribosomal subunit
12c6o3pA_
56.3 29
PDB header:hydrolase
Chain: A: PDB Molecule:peroxisomal nadh pyrophosphatase nudt12;
PDBTitle: crystal structure of the catalytic domain of mouse nudt12 in complex2 with amp and 3 mg2+ ions
13c3iz5Z_
56.3 20
PDB header:ribosome
Chain: Z: PDB Molecule:60s ribosomal protein l24 (l24e);
PDBTitle: localization of the large subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome
14c5ikfA_
55.7 21
PDB header:transcription
Chain: A: PDB Molecule:chromatin remodeling factor mit1;
PDBTitle: crystal structure of the c-terminal domain of the mit1 nucleosome2 remodeler in complex with clr1
15c3j21V_
54.9 33
PDB header:ribosome
Chain: V: PDB Molecule:50s ribosomal protein l24e;
PDBTitle: promiscuous behavior of proteins in archaeal ribosomes revealed by2 cryo-em: implications for evolution of eukaryotic ribosomes (50s3 ribosomal proteins)
16c3izcZ_
54.8 15
PDB header:ribosome
Chain: Z: PDB Molecule:60s ribosomal protein rpl24 (l24e);
PDBTitle: localization of the large subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome
17d2c34a1
54.8 11
Fold:Immunoglobulin-like beta-sandwich
Superfamily:ICP-like
Family:ICP-like
18d1vqou1
54.0 24
Fold:Glucocorticoid receptor-like (DNA-binding domain)
Superfamily:Glucocorticoid receptor-like (DNA-binding domain)
Family:Ribosomal protein L24e
19c3ccjU_
54.0 24
PDB header:ribosome
Chain: U: PDB Molecule:50s ribosomal protein l24e;
PDBTitle: structure of anisomycin resistant 50s ribosomal subunit: 23s rrna2 mutation c2534u
20c3m86B_
53.9 11
PDB header:protein binding
Chain: B: PDB Molecule:amoebiasin-2;
PDBTitle: crystal structure of the cysteine protease inhibitor, ehicp2, from2 entamoeba histolytica
21c2wgnB_
not modelled 53.5 18
PDB header:hydrolase inhibitor
Chain: B: PDB Molecule:inhibitor of cysteine peptidase compnd 3;
PDBTitle: pseudomonas aeruginosa icp
22c2zkru_
not modelled 52.8 33
PDB header:ribosomal protein/rna
Chain: U: PDB Molecule:rna expansion segment es41;
PDBTitle: structure of a mammalian ribosomal 60s subunit within an 80s complex2 obtained by docking homology models of the rna and proteins into an3 8.7 a cryo-em map
23c4a1eT_
not modelled 52.5 25
PDB header:ribosome
Chain: T: PDB Molecule:rpl24;
PDBTitle: t.thermophila 60s ribosomal subunit in complex with2 initiation factor 6. this file contains 5s rrna, 5.8s rrna3 and proteins of molecule 1
24c1k82D_
not modelled 52.2 32
PDB header:hydrolase/dna
Chain: D: PDB Molecule:formamidopyrimidine-dna glycosylase;
PDBTitle: crystal structure of e.coli formamidopyrimidine-dna2 glycosylase (fpg) covalently trapped with dna
25c2ecyA_
not modelled 52.1 23
PDB header:apoptosis
Chain: A: PDB Molecule:tnf receptor-associated factor 3;
PDBTitle: solution structure of the zinc finger, c3hc4 type (ring2 finger)" domain of tnf receptor-associated factor 3
26d1tdza3
not modelled 51.7 24
Fold:Glucocorticoid receptor-like (DNA-binding domain)
Superfamily:Glucocorticoid receptor-like (DNA-binding domain)
Family:C-terminal, Zn-finger domain of MutM-like DNA repair proteins
27c1nnjA_
not modelled 49.9 26
PDB header:hydrolase
Chain: A: PDB Molecule:formamidopyrimidine-dna glycosylase;
PDBTitle: crystal structure complex between the lactococcus lactis fpg and an2 abasic site containing dna
28c3zf7Y_
not modelled 49.2 20
PDB header:ribosome
Chain: Y: PDB Molecule:60s ribosomal protein l24, putative;
PDBTitle: high-resolution cryo-electron microscopy structure of the trypanosoma2 brucei ribosome
29c3mkrB_
not modelled 47.0 50
PDB header:transport protein
Chain: B: PDB Molecule:coatomer subunit alpha;
PDBTitle: crystal structure of yeast alpha/epsilon-cop subcomplex of the copi2 vesicular coat
30c4v195_
not modelled 45.9 24
PDB header:ribosome
Chain: 5: PDB Molecule:mitoribosomal protein bl32m, mrpl32;
PDBTitle: structure of the large subunit of the mammalian mitoribosome, part 12 of 2
31c2opfA_
not modelled 45.6 24
PDB header:hydrolase/dna
Chain: A: PDB Molecule:endonuclease viii;
PDBTitle: crystal structure of the dna repair enzyme endonuclease-viii (nei)2 from e. coli (r252a) in complex with ap-site containing dna substrate
32d1r2za3
not modelled 45.6 43
Fold:Glucocorticoid receptor-like (DNA-binding domain)
Superfamily:Glucocorticoid receptor-like (DNA-binding domain)
Family:C-terminal, Zn-finger domain of MutM-like DNA repair proteins
33c5dngA_
not modelled 43.8 14
PDB header:ligase
Chain: A: PDB Molecule:e3 ubiquitin-protein ligase bre1a;
PDBTitle: crystal structure of the rnf20 ring domain
34c5vgbA_
not modelled 43.7 17
PDB header:hydrolase/hydrolase inhibitor
Chain: A: PDB Molecule:crispr-associated endonuclease cas9;
PDBTitle: crystal structure of nmecas9 hnh domain bound to anti-crispr acriic1
35d1k82a3
not modelled 43.4 33
Fold:Glucocorticoid receptor-like (DNA-binding domain)
Superfamily:Glucocorticoid receptor-like (DNA-binding domain)
Family:C-terminal, Zn-finger domain of MutM-like DNA repair proteins
36c2k5cA_
not modelled 42.5 56
PDB header:metal binding protein
Chain: A: PDB Molecule:uncharacterized protein pf0385;
PDBTitle: nmr structure for pf0385
37c3pihA_
not modelled 42.2 38
PDB header:hydrolase/dna
Chain: A: PDB Molecule:uvrabc system protein a;
PDBTitle: t. maritima uvra in complex with fluorescein-modified dna
38c2qnfB_
not modelled 41.2 21
PDB header:hydrolase/dna
Chain: B: PDB Molecule:recombination endonuclease vii;
PDBTitle: crystal structure of t4 endonuclease vii h43n mutant in2 complex with heteroduplex dna containing base mismatches
39c4gveA_
not modelled 40.9 31
PDB header:viral protein
Chain: A: PDB Molecule:nucleoprotein;
PDBTitle: tacaribe nucleoprotein structure
40c2eciA_
not modelled 40.4 23
PDB header:metal binding protein
Chain: A: PDB Molecule:tnf receptor-associated factor 6;
PDBTitle: solution structure of the ring domain of the human tnf2 receptor-associated factor 6 protein
41d2nqda1
not modelled 40.1 11
Fold:Immunoglobulin-like beta-sandwich
Superfamily:ICP-like
Family:ICP-like
42c3zqjC_
not modelled 39.9 43
PDB header:dna binding protein
Chain: C: PDB Molecule:uvrabc system protein a;
PDBTitle: mycobacterium tuberculosis uvra
43c1yuzB_
not modelled 39.6 44
PDB header:oxidoreductase
Chain: B: PDB Molecule:nigerythrin;
PDBTitle: partially reduced state of nigerythrin
44d1rmda2
not modelled 39.4 27
Fold:RING/U-box
Superfamily:RING/U-box
Family:RING finger domain, C3HC4
45c2f42A_
not modelled 39.0 14
PDB header:chaperone
Chain: A: PDB Molecule:stip1 homology and u-box containing protein 1;
PDBTitle: dimerization and u-box domains of zebrafish c-terminal of hsp702 interacting protein
46d1u5sb1
not modelled 38.7 38
Fold:Glucocorticoid receptor-like (DNA-binding domain)
Superfamily:Glucocorticoid receptor-like (DNA-binding domain)
Family:LIM domain
47c3iz5i_
not modelled 38.6 21
PDB header:ribosome
Chain: I: PDB Molecule:60s ribosomal protein l10 (l10e);
PDBTitle: localization of the large subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome
48d1ee8a3
not modelled 38.4 43
Fold:Glucocorticoid receptor-like (DNA-binding domain)
Superfamily:Glucocorticoid receptor-like (DNA-binding domain)
Family:C-terminal, Zn-finger domain of MutM-like DNA repair proteins
49c2cupA_
not modelled 38.3 29
PDB header:metal binding protein
Chain: A: PDB Molecule:skeletal muscle lim-protein 1;
PDBTitle: solution structure of the skeletal muscle lim-protein 1
50c2kdxA_
not modelled 36.9 15
PDB header:metal-binding protein
Chain: A: PDB Molecule:hydrogenase/urease nickel incorporation protein
PDBTitle: solution structure of hypa protein
51c2yurA_
not modelled 36.3 15
PDB header:protein binding
Chain: A: PDB Molecule:retinoblastoma-binding protein 6;
PDBTitle: solution structure of the ring finger of human2 retinoblastoma-binding protein 6
52c1wyhA_
not modelled 36.0 33
PDB header:metal binding protein
Chain: A: PDB Molecule:skeletal muscle lim-protein 2;
PDBTitle: solution structure of the lim domain from human skeletal2 muscle lim-protein 2
53c5a3aA_
not modelled 35.9 42
PDB header:transferase
Chain: A: PDB Molecule:sir2 family protein;
PDBTitle: crystal structure of the adp-ribosylating sirtuin (sirtm)2 from streptococcus pyogenes (apo form)
54c4ce45_
not modelled 34.5 24
PDB header:ribosome
Chain: 5: PDB Molecule:mrpl32;
PDBTitle: 39s large subunit of the porcine mitochondrial ribosome
55c2jmdA_
not modelled 34.0 23
PDB header:ligase
Chain: A: PDB Molecule:tnf receptor-associated factor 6;
PDBTitle: solution structure of the ring domain of human traf6
56c2dajA_
not modelled 33.4 27
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:kiaa0977 protein;
PDBTitle: solution structure of the novel identified ubiquitin-like2 domain in the human cobl-like 1 protein
57d1l1ta3
not modelled 33.3 50
Fold:Glucocorticoid receptor-like (DNA-binding domain)
Superfamily:Glucocorticoid receptor-like (DNA-binding domain)
Family:C-terminal, Zn-finger domain of MutM-like DNA repair proteins
58c4bs9A_
not modelled 33.1 22
PDB header:isomerase
Chain: A: PDB Molecule:trud;
PDBTitle: structure of the heterocyclase trud
59c4ogeA_
not modelled 33.0 21
PDB header:hydrolase
Chain: A: PDB Molecule:hnh endonuclease domain protein;
PDBTitle: crystal structure of the type ii-c cas9 enzyme from actinomyces2 naeslundii
60c3a46B_
not modelled 32.9 13
PDB header:hydrolase
Chain: B: PDB Molecule:formamidopyrimidine-dna glycosylase;
PDBTitle: crystal structure of mvnei1/thf complex
61d1ctla1
not modelled 32.4 33
Fold:Glucocorticoid receptor-like (DNA-binding domain)
Superfamily:Glucocorticoid receptor-like (DNA-binding domain)
Family:LIM domain
62c1z6uA_
not modelled 32.4 22
PDB header:ligase
Chain: A: PDB Molecule:np95-like ring finger protein isoform b;
PDBTitle: np95-like ring finger protein isoform b [homo sapiens]
63c6o9l3_
not modelled 31.5 26
PDB header:transcription/dna
Chain: 3: PDB Molecule:cdk-activating kinase assembly factor mat1;
PDBTitle: human holo-pic in the closed state
64c4i5iA_
not modelled 31.4 29
PDB header:hydrolase
Chain: A: PDB Molecule:nad-dependent protein deacetylase sirtuin-1;
PDBTitle: crystal structure of the sirt1 catalytic domain bound to nad and an2 ex527 analog
65c3hkzP_
not modelled 31.4 33
PDB header:transferase
Chain: P: PDB Molecule:dna-directed rna polymerase subunit p;
PDBTitle: the x-ray crystal structure of rna polymerase from archaea
66c1x4jA_
not modelled 30.5 33
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:ring finger protein 38;
PDBTitle: solution structure of ring finger in ring finger protein 38
67c2gb5B_
not modelled 30.5 18
PDB header:hydrolase
Chain: B: PDB Molecule:nadh pyrophosphatase;
PDBTitle: crystal structure of nadh pyrophosphatase (ec 3.6.1.22) (1790429) from2 escherichia coli k12 at 2.30 a resolution
68c1g8jC_
not modelled 30.2 30
PDB header:oxidoreductase
Chain: C: PDB Molecule:arsenite oxidase;
PDBTitle: crystal structure analysis of arsenite oxidase from2 alcaligenes faecalis
69c3mv2A_
not modelled 30.1 25
PDB header:protein transport
Chain: A: PDB Molecule:coatomer subunit alpha;
PDBTitle: crystal structure of a-cop in complex with e-cop
70c2hr5B_
not modelled 29.8 57
PDB header:metal binding protein
Chain: B: PDB Molecule:rubrerythrin;
PDBTitle: pf1283- rubrerythrin from pyrococcus furiosus iron bound form
71d2dara2
not modelled 29.5 29
Fold:Glucocorticoid receptor-like (DNA-binding domain)
Superfamily:Glucocorticoid receptor-like (DNA-binding domain)
Family:LIM domain
72c2aklA_
not modelled 29.0 39
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:phna-like protein pa0128;
PDBTitle: solution structure for phn-a like protein pa0128 from2 pseudomonas aeruginosa
73c2e72A_
not modelled 28.6 38
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:pogo transposable element with znf domain;
PDBTitle: solution structure of the zinc finger domain of human2 kiaa0461
74d2akla2
not modelled 28.2 39
Fold:Rubredoxin-like
Superfamily:Zinc beta-ribbon
Family:PhnA zinc-binding domain
75c6g5iy_
not modelled 27.9 14
PDB header:ribosome
Chain: Y: PDB Molecule:40s ribosomal protein s24;
PDBTitle: cryo-em structure of a late human pre-40s ribosomal subunit - state r
76d1k3xa3
not modelled 27.7 33
Fold:Glucocorticoid receptor-like (DNA-binding domain)
Superfamily:Glucocorticoid receptor-like (DNA-binding domain)
Family:C-terminal, Zn-finger domain of MutM-like DNA repair proteins
77c1x61A_
not modelled 26.7 30
PDB header:cell adhesion
Chain: A: PDB Molecule:thyroid receptor interacting protein 6;
PDBTitle: solution structure of the first lim domain of thyroid2 receptor interacting protein 6 (trip6)
78c3iynM_
not modelled 26.6 24
PDB header:virus
Chain: M: PDB Molecule:penton base protein;
PDBTitle: 3.6-angstrom cryoem structure of human adenovirus type 5
79c5mqfI_
not modelled 26.1 31
PDB header:splicing
Chain: I: PDB Molecule:pre-mrna-processing factor 19;
PDBTitle: cryo-em structure of a human spliceosome activated for step 2 of2 splicing (c* complex)
80c5ijlA_
not modelled 26.0 31
PDB header:transferase
Chain: A: PDB Molecule:dna polymerase ii large subunit;
PDBTitle: d-family dna polymerase - dp2 subunit (catalytic subunit)
81c2dkdA_
not modelled 26.0 14
PDB header:isomerase
Chain: A: PDB Molecule:phosphoacetylglucosamine mutase;
PDBTitle: crystal structure of n-acetylglucosamine-phosphate mutase,2 a member of the alpha-d-phosphohexomutase superfamily, in3 the product complex
82c4bjuB_
not modelled 25.8 10
PDB header:isomerase
Chain: B: PDB Molecule:n-acetylglucosamine-phosphate mutase;
PDBTitle: genetic and structural validation of aspergillus fumigatus2 n-acetylphosphoglucosamine mutase as an antifungal target
83c3glsC_
not modelled 25.7 42
PDB header:hydrolase
Chain: C: PDB Molecule:nad-dependent deacetylase sirtuin-3,
PDBTitle: crystal structure of human sirt3
84d1t1ha_
not modelled 25.6 27
Fold:RING/U-box
Superfamily:RING/U-box
Family:U-box
85c2bldD_
not modelled 25.5 24
PDB header:virus
Chain: D: PDB Molecule:penton protein;
PDBTitle: the quasi-atomic model of human adenovirus type 52 capsid (part 1)
86d1kfia2
not modelled 25.2 21
Fold:Phosphoglucomutase, first 3 domains
Superfamily:Phosphoglucomutase, first 3 domains
Family:Phosphoglucomutase, first 3 domains
87c5a1vK_
not modelled 25.2 44
PDB header:transport protein
Chain: K: PDB Molecule:coatomer subunit alpha;
PDBTitle: the structure of the copi coat linkage i
88c2cu8A_
not modelled 24.5 29
PDB header:metal binding protein
Chain: A: PDB Molecule:cysteine-rich protein 2;
PDBTitle: solution structure of the lim domain of human cysteine-rich2 protein 2
89c2lcqA_
not modelled 24.5 27
PDB header:metal binding protein
Chain: A: PDB Molecule:putative toxin vapc6;
PDBTitle: solution structure of the endonuclease nob1 from p.horikoshii
90c4rgiA_
not modelled 24.3 14
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of ktsc domain protein ypo2434 from yersinia pestis
91c2pziA_
not modelled 24.2 24
PDB header:transferase
Chain: A: PDB Molecule:probable serine/threonine-protein kinase pkng;
PDBTitle: crystal structure of protein kinase pkng from mycobacterium2 tuberculosis in complex with tetrahydrobenzothiophene ax20017
92d1m2ka_
not modelled 24.2 42
Fold:DHS-like NAD/FAD-binding domain
Superfamily:DHS-like NAD/FAD-binding domain
Family:Sir2 family of transcriptional regulators
93c5gtxA_
not modelled 23.5 12
PDB header:oxidoreductase
Chain: A: PDB Molecule:buckwheat glutaredoxin;
PDBTitle: crystal structure of mutated buckwheat glutaredoxin
94c4aqqA_
not modelled 23.5 24
PDB header:viral protein
Chain: A: PDB Molecule:l2 protein iii (penton base);
PDBTitle: dodecahedron formed of penton base protein from adenovirus ad3
95c5oj7A_
not modelled 23.4 42
PDB header:hydrolase
Chain: A: PDB Molecule:nad-dependent protein deacylase;
PDBTitle: sirtuin 4 orthologue from xenopus tropicalis in complex with adp-2 ribose
96d2c2la2
not modelled 23.2 18
Fold:RING/U-box
Superfamily:RING/U-box
Family:U-box
97c5dkaA_
not modelled 23.1 26
PDB header:ligase
Chain: A: PDB Molecule:e3 ubiquitin-protein ligase rnf125;
PDBTitle: a c2hc zinc finger is essential for the activity of the ring ubiquitin2 ligase rnf125
98c3f2cA_
not modelled 23.1 38
PDB header:transferase/dna
Chain: A: PDB Molecule:geobacillus kaustophilus dna polc;
PDBTitle: dna polymerase polc from geobacillus kaustophilus complex with dna,2 dgtp and mn
99d1q1aa_
not modelled 23.0 33
Fold:DHS-like NAD/FAD-binding domain
Superfamily:DHS-like NAD/FAD-binding domain
Family:Sir2 family of transcriptional regulators
100c6gc1A_
not modelled 23.0 13
PDB header:unknown function
Chain: A: PDB Molecule:nhl repeat-containing protein 2;
PDBTitle: crystal structure of trx-like and nhl repeat containing domains of2 human nhlrc2
101d1s5pa_
not modelled 22.9 21
Fold:DHS-like NAD/FAD-binding domain
Superfamily:DHS-like NAD/FAD-binding domain
Family:Sir2 family of transcriptional regulators
102c3oheA_
not modelled 22.9 15
PDB header:hydrolase
Chain: A: PDB Molecule:histidine triad (hit) protein;
PDBTitle: crystal structure of a histidine triad protein (maqu_1709) from2 marinobacter aquaeolei vt8 at 1.20 a resolution
103c2emcA_
not modelled 22.7 25
PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 473;
PDBTitle: solution structure of the c2h2 type zinc finger (region 641-2 673) of human zinc finger protein 473
104c4r7eA_
not modelled 22.3 18
PDB header:ligase
Chain: A: PDB Molecule:e3 ubiquitin-protein ligase bre1;
PDBTitle: structure of bre1 ring domain
105c4qiwP_
not modelled 22.2 33
PDB header:transcription
Chain: P: PDB Molecule:dna-directed rna polymerase subunit p;
PDBTitle: crystal structure of euryarchaeal rna polymerase from thermococcus2 kodakarensis
106c2kreA_
not modelled 22.0 23
PDB header:protein binding
Chain: A: PDB Molecule:ubiquitin conjugation factor e4 b;
PDBTitle: solution structure of e4b/ufd2a u-box domain
107c3zifM_
not modelled 22.0 22
PDB header:virus
Chain: M: PDB Molecule:penton protein;
PDBTitle: cryo-em structures of two intermediates provide insight into2 adenovirus assembly and disassembly
108d1e7la2
not modelled 22.0 19
Fold:His-Me finger endonucleases
Superfamily:His-Me finger endonucleases
Family:Recombination endonuclease VII, N-terminal domain
109c2l7xA_
not modelled 21.9 38
PDB header:viral protein
Chain: A: PDB Molecule:envelope glycoprotein;
PDBTitle: crimean congo hemorrhagic fever gn zinc finger
110d1imla1
not modelled 21.9 56
Fold:Glucocorticoid receptor-like (DNA-binding domain)
Superfamily:Glucocorticoid receptor-like (DNA-binding domain)
Family:LIM domain
111c5fywW_
not modelled 21.8 70
PDB header:transcription
Chain: W: PDB Molecule:transcription initiation factor iie subunit alpha;
PDBTitle: transcription initiation complex structures elucidate dna opening (oc)
112c1dvbA_
not modelled 21.5 57
PDB header:electron transport
Chain: A: PDB Molecule:rubrerythrin;
PDBTitle: rubrerythrin
113c3k1lA_
not modelled 21.4 44
PDB header:ligase
Chain: A: PDB Molecule:fancl;
PDBTitle: crystal structure of fancl
114d1yc5a1
not modelled 21.2 33
Fold:DHS-like NAD/FAD-binding domain
Superfamily:DHS-like NAD/FAD-binding domain
Family:Sir2 family of transcriptional regulators
115c3a44D_
not modelled 20.9 21
PDB header:metal binding protein
Chain: D: PDB Molecule:hydrogenase nickel incorporation protein hypa;
PDBTitle: crystal structure of hypa in the dimeric form
116c2iybG_
not modelled 20.8 38
PDB header:metal-binding
Chain: G: PDB Molecule:testin;
PDBTitle: structure of complex between the 3rd lim domain of tes and the evh12 domain of mena
117c2bx9J_
not modelled 20.8 35
PDB header:transcription regulation
Chain: J: PDB Molecule:tryptophan rna-binding attenuator protein-inhibitory
PDBTitle: crystal structure of b.subtilis anti-trap protein, an2 antagonist of trap-rna interactions
118c2lo2A_
not modelled 20.6 22
PDB header:transcription
Chain: A: PDB Molecule:saga-associated factor 11;
PDBTitle: solution structure of sgf11(63-99) zinc finger domain
119c5l9wC_
not modelled 20.1 43
PDB header:ligase
Chain: C: PDB Molecule:acetophenone carboxylase beta subunit;
PDBTitle: crystal structure of the apc core complex

Binding site prediction 

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