Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2142c_(-)_2402201_2402518
DateMon Aug 5 13:25:26 BST 2019
Unique Job ID18dbce7d5ce54f8b
SequenceMTRRLRVHNG ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:38.786 Y:35.866 Z:34.406
Model (left) based on template c5cw7H_
Top template information
PDB header:toxin
Chain: H: PDB Molecule:plasmid stabilization protein pare;
PDBTitle: crystal structure of the paaa2-pare2 antitoxin-toxin complex
Confidence and coverage
Confidence: 96.1% Coverage: 84%
88 residues ( 84% of your sequence) have been modelled with 96.1% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c5cw7H_



96.1 22
PDB header:toxin
Chain: H: PDB Molecule:plasmid stabilization protein pare;
PDBTitle: crystal structure of the paaa2-pare2 antitoxin-toxin complex
2c5cegB_



94.5 23
PDB header:toxin
Chain: B: PDB Molecule:plasmid stabilization system;
PDBTitle: x-ray structure of toxin/anti-toxin complex from mesorhizobium2 opportunistum
3c3kxeB_



93.8 19
PDB header:protein binding
Chain: B: PDB Molecule:toxin protein pare-1;
PDBTitle: a conserved mode of protein recognition and binding in a2 pard-pare toxin-antitoxin complex
4d1j7ga_



22.8 24
Fold:DTD-like
Superfamily:DTD-like
Family:DTD-like
5c5xaqB_



22.5 25
PDB header:hydrolase
Chain: B: PDB Molecule:probable d-tyrosyl-trna(tyr) deacylase 2;
PDBTitle: crystal structure of animalia-specific trna deacylase from mus2 musculus
6c6dftE_



19.5 20
PDB header:transferase
Chain: E: PDB Molecule:deoxyhypusine synthase;
PDBTitle: trypanosoma brucei deoxyhypusine synthase
7c2dboA_



17.2 29
PDB header:hydrolase
Chain: A: PDB Molecule:d-tyrosyl-trna(tyr) deacylase;
PDBTitle: crystal structure of d-tyr-trna(tyr) deacylase from aquifex aeolicus
8c5mwwA_



16.8 18
PDB header:transferase
Chain: A: PDB Molecule:rna polymerase sigma factor siga;
PDBTitle: sigma1.1 domain of sigmaa from bacillus subtilis
9c5lxlA_



16.8 45
PDB header:viral protein
Chain: A: PDB Molecule:decoration protein;
PDBTitle: nmr structure of the n-terminal domain of the bacteriophage t52 decoration protein pb10
10c5xbcB_



16.5 70
PDB header:hydrolase
Chain: B: PDB Molecule:nsp1 protein;
PDBTitle: crystal structure basis for pedv nsp1
11d1jkea_



14.5 33
Fold:DTD-like
Superfamily:DTD-like
Family:DTD-like
12c4y0lA_



13.4 54
PDB header:membrane protein
Chain: A: PDB Molecule:putative membrane protein mmpl11;
PDBTitle: mycobacterial membrane protein mmpl11d2
13c2okvC_



12.8 21
PDB header:hydrolase
Chain: C: PDB Molecule:probable d-tyrosyl-trna(tyr) deacylase 1;
PDBTitle: c-myc dna unwinding element binding protein
14c4gq6A_



11.8 32
PDB header:transcription/transcription inhibitor
Chain: A: PDB Molecule:menin;
PDBTitle: human menin in complex with mll peptide
15d8ruci_



10.6 20
Fold:RuBisCO, small subunit
Superfamily:RuBisCO, small subunit
Family:RuBisCO, small subunit
16d1klxa_



10.5 39
Fold:alpha-alpha superhelix
Superfamily:HCP-like
Family:HCP-like
17c4kmhB_



10.4 67
PDB header:protein binding
Chain: B: PDB Molecule:suppressor of fused homolog;
PDBTitle: crystal structure of suppressor of fused d20
18d1uzdc1



10.4 29
Fold:RuBisCO, small subunit
Superfamily:RuBisCO, small subunit
Family:RuBisCO, small subunit
19c6nx4A_



10.3 33
PDB header:translation
Chain: A: PDB Molecule:eukaryotic elongation factor 2 kinase;
PDBTitle: structure of the c-terminal helical repeat domain of eukaryotic2 elongation factor 2 kinase (eef-2k)
20d1rbli_



10.3 47
Fold:RuBisCO, small subunit
Superfamily:RuBisCO, small subunit
Family:RuBisCO, small subunit
21d1ej7s_



not modelled 10.3 17
Fold:RuBisCO, small subunit
Superfamily:RuBisCO, small subunit
Family:RuBisCO, small subunit
22d2v6ai1



not modelled 10.2 30
Fold:RuBisCO, small subunit
Superfamily:RuBisCO, small subunit
Family:RuBisCO, small subunit
23d1gk8i_



not modelled 10.1 30
Fold:RuBisCO, small subunit
Superfamily:RuBisCO, small subunit
Family:RuBisCO, small subunit
24d1wdds_



not modelled 9.8 15
Fold:RuBisCO, small subunit
Superfamily:RuBisCO, small subunit
Family:RuBisCO, small subunit
25c4tpsA_



not modelled 9.8 24
PDB header:replication
Chain: A: PDB Molecule:sporulation inhibitor of replication protein sira;
PDBTitle: sporulation inhibitor of dna replication, sira, in complex with domain2 i of dnaa
26c2k6xA_



not modelled 9.3 15
PDB header:transcription
Chain: A: PDB Molecule:rna polymerase sigma factor rpod;
PDBTitle: autoregulation of a group 1 bacterial sigma factor involves2 the formation of a region 1.1- induced compacted structure
27d2yzca2



not modelled 9.3 35
Fold:T-fold
Superfamily:Tetrahydrobiopterin biosynthesis enzymes-like
Family:Urate oxidase (uricase)
28c3ko7E_



not modelled 9.0 21
PDB header:hydrolase
Chain: E: PDB Molecule:d-tyrosyl-trna(tyr) deacylase;
PDBTitle: dtd from plasmodium falciparum in complex with d-lysine
29c1gz3B_



not modelled 8.5 39
PDB header:oxidoreductase
Chain: B: PDB Molecule:nad-dependent malic enzyme, mitochondrial;
PDBTitle: molecular mechanism for the regulation of human mitochondrial nad(p)+-2 dependent malic enzyme by atp and fumarate
30c2ybvN_



not modelled 8.5 40
PDB header:lyase
Chain: N: PDB Molecule:ribulose bisphosphate carboxylase small subunit;
PDBTitle: structure of rubisco from thermosynechococcus elongatus
31d1pj3a2



not modelled 7.8 39
Fold:Aminoacid dehydrogenase-like, N-terminal domain
Superfamily:Aminoacid dehydrogenase-like, N-terminal domain
Family:Malic enzyme N-domain
32c3oakD_



not modelled 7.7 46
PDB header:transcription
Chain: D: PDB Molecule:transcription elongation factor spt6;
PDBTitle: crystal structure of a spn1 (iws1)-spt6 complex
33c5he9E_



not modelled 7.7 43
PDB header:protein binding
Chain: E: PDB Molecule:phage inhibitor protein;
PDBTitle: bacterial initiation protein in complex with phage inhibitor protein
34d1gq2a2



not modelled 7.6 39
Fold:Aminoacid dehydrogenase-like, N-terminal domain
Superfamily:Aminoacid dehydrogenase-like, N-terminal domain
Family:Malic enzyme N-domain
35d1uzhc1



not modelled 7.5 35
Fold:RuBisCO, small subunit
Superfamily:RuBisCO, small subunit
Family:RuBisCO, small subunit
36d1ir1s_



not modelled 7.4 26
Fold:RuBisCO, small subunit
Superfamily:RuBisCO, small subunit
Family:RuBisCO, small subunit
37d1svdm1



not modelled 7.0 33
Fold:RuBisCO, small subunit
Superfamily:RuBisCO, small subunit
Family:RuBisCO, small subunit
38c1qr6A_



not modelled 6.8 39
PDB header:oxidoreductase
Chain: A: PDB Molecule:malic enzyme 2;
PDBTitle: human mitochondrial nad(p)-dependent malic enzyme
39c1fsvA_



not modelled 6.5 75
PDB header:beta beta alpha motif
Chain: A: PDB Molecule:full sequence design 1 of beta beta alpha motif;
PDBTitle: full sequence design 1 (fsd-1) of beta beta alpha motif,2 nmr, minimized average structure
40c1fsdA_



not modelled 6.5 75
PDB header:novel sequence
Chain: A: PDB Molecule:full sequence design 1 of beta beta alpha motif;
PDBTitle: full sequence design 1 (fsd-1) of beta beta alpha motif,2 nmr, 41 structures
41c2yzbA_



not modelled 6.4 35
PDB header:oxidoreductase
Chain: A: PDB Molecule:uricase;
PDBTitle: crystal structure of uricase from arthrobacter globiformis2 in complex with uric acid (substrate)
42c3mjhD_



not modelled 6.2 50
PDB header:protein transport
Chain: D: PDB Molecule:early endosome antigen 1;
PDBTitle: crystal structure of human rab5a in complex with the c2h2 zinc finger2 of eea1
43d1dhsa_



not modelled 5.8 38
Fold:DHS-like NAD/FAD-binding domain
Superfamily:DHS-like NAD/FAD-binding domain
Family:Deoxyhypusine synthase, DHS
44c2aw5A_



not modelled 5.7 30
PDB header:oxidoreductase
Chain: A: PDB Molecule:nadp-dependent malic enzyme;
PDBTitle: crystal structure of a human malic enzyme
45c4xruE_



not modelled 5.5 19
PDB header:protein binding
Chain: E: PDB Molecule:rnl;
PDBTitle: structure of pnkp1/rnl/hen1 complex
46c1psvA_



not modelled 5.3 75
PDB header:designed peptide
Chain: A: PDB Molecule:pda8d;
PDBTitle: computationally designed peptide with a beta-beta-alpha2 fold selection, nmr, 32 structures
47d2pgda1



not modelled 5.1 36
Fold:6-phosphogluconate dehydrogenase C-terminal domain-like
Superfamily:6-phosphogluconate dehydrogenase C-terminal domain-like
Family:Hydroxyisobutyrate and 6-phosphogluconate dehydrogenase domain
48c3oakC_



not modelled 5.1 50
PDB header:transcription
Chain: C: PDB Molecule:transcription elongation factor spt6;
PDBTitle: crystal structure of a spn1 (iws1)-spt6 complex

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