Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2146c_(-)_2405674_2405964
DateMon Aug 5 13:25:26 BST 2019
Unique Job IDd6f1e5370c984d02
SequenceLVVFFQILGF ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:18.257 Y:25.015 Z:25.219
Model (left) based on template d1adta1
Top template information
Fold:Domain of early E2A DNA-binding protein, ADDBP
Superfamily:Domain of early E2A DNA-binding protein, ADDBP
Family:Domain of early E2A DNA-binding protein, ADDBP
Confidence and coverage
Confidence: 10.3% Coverage: 23%
22 residues ( 23% of your sequence) have been modelled with 10.3% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
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3D viewing
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Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d1adta1



10.3 18
Fold:Domain of early E2A DNA-binding protein, ADDBP
Superfamily:Domain of early E2A DNA-binding protein, ADDBP
Family:Domain of early E2A DNA-binding protein, ADDBP
2c3dgpB_



9.8 50
PDB header:transcription
Chain: B: PDB Molecule:rna polymerase ii transcription factor b subunit 5;
PDBTitle: crystal structure of the complex between tfb5 and the c-terminal2 domain of tfb2
3d1ydla1



8.9 38
Fold:TFB5-like
Superfamily:TFB5-like
Family:TFB5-like
4c1aduB_



7.3 25
PDB header:dna-binding protein
Chain: B: PDB Molecule:adenovirus single-stranded dna-binding protein;
PDBTitle: early e2a dna-binding protein
5c2jypA_



6.6 83
PDB header:unknown function
Chain: A: PDB Molecule:aragonite protein ap7;
PDBTitle: coordinates for lowest energy structure of aragonite2 protein-7, c-terminal domain
6c5x62A_



6.3 16
PDB header:transferase
Chain: A: PDB Molecule:carnosine n-methyltransferase;
PDBTitle: crystal structure of a carnosine n-methyltransferase bound by adohcy

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below