Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2151c_(ftsQ)_2409705_2410649
DateMon Aug 5 13:25:27 BST 2019
Unique Job IDf34ab66aea054e57
SequenceMTEHNEDPQI ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:76.231 Y:29.265 Z:32.471
Model (left) based on template c2vh1A_
Top template information
PDB header:cell cycle
Chain: A: PDB Molecule:cell division protein ftsq;
PDBTitle: crystal structure of bacterial cell division protein ftsq from e.coli
Confidence and coverage
Confidence:100.0% Coverage: 59%
184 residues ( 59% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c2vh1A_
100.0 15
PDB header:cell cycle
Chain: A: PDB Molecule:cell division protein ftsq;
PDBTitle: crystal structure of bacterial cell division protein ftsq from e.coli
2c2vh2A_
100.0 17
PDB header:cell cycle
Chain: A: PDB Molecule:cell division protein ftsq;
PDBTitle: crystal structure of cell divison protein ftsq from yersinia2 enterecolitica
3c2aljA_
99.0 13
PDB header:cell cycle
Chain: A: PDB Molecule:cell-division initiation protein;
PDBTitle: structure of the cis confomer of the major extracytoplasmic2 domain of the bacterial cell division protein divib from3 geobacillus stearothermophilus
4c3j00Z_
98.8 12
PDB header:ribosome/ribosomal protein
Chain: Z: PDB Molecule:cell division protein ftsq;
PDBTitle: structure of the ribosome-secye complex in the membrane environment
5c2qczA_
97.6 19
PDB header:membrane protein, protein transport
Chain: A: PDB Molecule:outer membrane protein assembly factor yaet;
PDBTitle: structure of n-terminal domain of e. coli yaet
6c4k3bA_
97.4 13
PDB header:membrane protein
Chain: A: PDB Molecule:outer membrane protein assembly factor bama;
PDBTitle: the crystal structure of bama from neisseria gonorrhoeae
7c3efcA_
97.2 19
PDB header:membrane protein
Chain: A: PDB Molecule:outer membrane protein assembly factor yaet;
PDBTitle: crystal structure of yaet periplasmic domain
8c4c4vA_
96.8 15
PDB header:protein transport
Chain: A: PDB Molecule:outer membrane protein assembly factor bama;
PDBTitle: structure of the outer membrane protein insertase bama with one2 potra domain.
9c5ekqA_
96.4 21
PDB header:membrane protein
Chain: A: PDB Molecule:outer membrane protein assembly factor bama;
PDBTitle: the structure of the bamacde subcomplex from e. coli
10c2v9hA_
96.1 19
PDB header:protein-binding
Chain: A: PDB Molecule:outer membrane protein assembly factor yaet;
PDBTitle: solution structure of an escherichia coli yaet tandem potra2 domain
11c2x8xX_
95.4 22
PDB header:chaperone
Chain: X: PDB Molecule:tlr1789 protein;
PDBTitle: structure of the n-terminal domain of omp85 from the2 thermophilic cyanobacterium thermosynechococcus elongatus
12c4c00A_
94.8 13
PDB header:transport protein
Chain: A: PDB Molecule:translocation and assembly module tama;
PDBTitle: crystal structure of tama from e. coli
13c3og5A_
94.5 15
PDB header:protein binding
Chain: A: PDB Molecule:outer membrane protein assembly complex, yaet protein;
PDBTitle: crystal structure of bama potra45 tandem
14c4k3cA_
93.4 12
PDB header:membrane protein
Chain: A: PDB Molecule:outer membrane protein assembly factor bama;
PDBTitle: the crystal structure of bama from haemophilus ducreyi lacking potra2 domains 1-3
15c2mhjA_
93.1 15
PDB header:protein transport
Chain: A: PDB Molecule:tpsb4 protein;
PDBTitle: solution structure of tpsb4 n-terminal potra domain from pseudomonas2 aeruginosa
16c3mc8A_
87.1 14
PDB header:membrane protein
Chain: A: PDB Molecule:alr2269 protein;
PDBTitle: potra1-3 of the periplasmic domain of omp85 from anabaena
17c5efrA_
79.1 14
PDB header:cell adhesion
Chain: A: PDB Molecule:bama-bamd fusion protein;
PDBTitle: crystal structure of a bama-bamd fusion
18c5lq3F_
77.5 8
PDB header:transport protein
Chain: F: PDB Molecule:cmeb;
PDBTitle: structures and transport dynamics of the campylobacter jejuni2 multidrug efflux pump cmeb
19c4pk1A_
76.5 19
PDB header:protein binding
Chain: A: PDB Molecule:chimera protein of outer membrane protein assembly factors
PDBTitle: structure of bamb fused to a bama potra domain fragment
20c2qdzA_
73.3 4
PDB header:protein transport
Chain: A: PDB Molecule:tpsb transporter fhac;
PDBTitle: structure of the membrane protein fhac: a member of the omp85/tpsb2 transporter family
21c5uayA_
not modelled 73.0 8
PDB header:membrane protein
Chain: A: PDB Molecule:protein toc75-3, chloroplastic;
PDBTitle: the structure of the arabidopsis thaliana toc75 potra domains
22c4mt1A_
not modelled 72.3 10
PDB header:membrane protein, tranport protein
Chain: A: PDB Molecule:drug efflux protein;
PDBTitle: crystal structure of the neisseria gonorrhoeae mtrd inner membrane2 multidrug efflux pump
23c6f0kA_
not modelled 56.8 26
PDB header:membrane protein
Chain: A: PDB Molecule:cytochrome c family protein;
PDBTitle: alternative complex iii
24c2v50A_
not modelled 54.7 19
PDB header:membrane protein
Chain: A: PDB Molecule:multidrug resistance protein mexb;
PDBTitle: the missing part of the bacterial mexab-oprm system: structural2 determination of the multidrug exporter mexb
25c2rjbD_
not modelled 49.1 22
PDB header:structural genomics, unknown function
Chain: D: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of uncharacterized protein ydcj (sf1787) from2 shigella flexneri which includes domain duf1338. northeast structural3 genomics consortium target sfr276
26c6csxA_
not modelled 47.4 15
PDB header:transport protein
Chain: A: PDB Molecule:multidrug efflux pump subunit acrb;
PDBTitle: single particles cryo-em structure of acrb d407a associated with lipid2 bilayer at 3.0 angstrom
27c6owsB_
not modelled 47.0 13
PDB header:membrane protein
Chain: B: PDB Molecule:efflux pump membrane transporter;
PDBTitle: cryo-em structure of an acinetobacter baumannii multidrug efflux pump
28c4k0eA_
not modelled 34.1 15
PDB header:transport protein
Chain: A: PDB Molecule:heavy metal cation tricomponent efflux pump znea(czca-
PDBTitle: x-ray crystal structure of a heavy metal efflux pump, crystal form ii
29c2lnaA_
not modelled 26.7 22
PDB header:hydrolase
Chain: A: PDB Molecule:afg3-like protein 2;
PDBTitle: solution nmr structure of the mitochondrial inner membrane domain2 (residues 164-251), ftsh_ext, from the paraplegin-like protein afg3l23 from homo sapiens, northeast structural genomics consortium target4 hr6741a
30c6fosD_
not modelled 26.5 25
PDB header:photosynthesis
Chain: D: PDB Molecule:photosystem i p700 chlorophyll a apoprotein a2;
PDBTitle: cyanidioschyzon merolae photosystem i
31c3hd7A_
not modelled 24.9 13
PDB header:exocytosis
Chain: A: PDB Molecule:vesicle-associated membrane protein 2;
PDBTitle: helical extension of the neuronal snare complex into the membrane,2 spacegroup c 1 2 1
32c1oy8A_
not modelled 23.5 17
PDB header:membrane protein
Chain: A: PDB Molecule:acriflavine resistance protein b;
PDBTitle: structural basis of multiple drug binding capacity of the acrb2 multidrug efflux pump
33c2cghB_
not modelled 22.1 17
PDB header:ligase
Chain: B: PDB Molecule:biotin ligase;
PDBTitle: crystal structure of biotin ligase from mycobacterium tuberculosis
34c6btmA_
not modelled 19.0 9
PDB header:membrane protein
Chain: A: PDB Molecule:alternative complex iii subunit a;
PDBTitle: structure of alternative complex iii from flavobacterium johnsoniae2 (wild type)
35d2hkja1
not modelled 18.5 16
Fold:S13-like H2TH domain
Superfamily:S13-like H2TH domain
Family:Topoisomerase VI-B subunit middle domain
36c2gamA_
not modelled 17.8 11
PDB header:transferase
Chain: A: PDB Molecule:beta-1,6-n-acetylglucosaminyltransferase;
PDBTitle: x-ray crystal structure of murine leukocyte-type core 2 b1,6-n-2 acetylglucosaminyltransferase (c2gnt-l) in complex with galb1,3galnac
37d1ee8a1
not modelled 17.1 24
Fold:S13-like H2TH domain
Superfamily:S13-like H2TH domain
Family:Middle domain of MutM-like DNA repair proteins
38c2kogA_
not modelled 16.0 15
PDB header:membrane protein
Chain: A: PDB Molecule:vesicle-associated membrane protein 2;
PDBTitle: lipid-bound synaptobrevin solution nmr structure
39c2mpnB_
not modelled 15.7 15
PDB header:membrane protein
Chain: B: PDB Molecule:inner membrane protein ygap;
PDBTitle: 3d nmr structure of the transmembrane domain of the full-length inner2 membrane protein ygap from escherichia coli
40c2mpnA_
not modelled 15.7 15
PDB header:membrane protein
Chain: A: PDB Molecule:inner membrane protein ygap;
PDBTitle: 3d nmr structure of the transmembrane domain of the full-length inner2 membrane protein ygap from escherichia coli
41d1tdza1
not modelled 15.0 21
Fold:S13-like H2TH domain
Superfamily:S13-like H2TH domain
Family:Middle domain of MutM-like DNA repair proteins
42d1r2za1
not modelled 14.4 17
Fold:S13-like H2TH domain
Superfamily:S13-like H2TH domain
Family:Middle domain of MutM-like DNA repair proteins
43d1k82a1
not modelled 14.0 21
Fold:S13-like H2TH domain
Superfamily:S13-like H2TH domain
Family:Middle domain of MutM-like DNA repair proteins
44c3k07A_
not modelled 13.2 13
PDB header:transport protein
Chain: A: PDB Molecule:cation efflux system protein cusa;
PDBTitle: crystal structure of cusa
45c5t4oJ_
not modelled 11.6 19
PDB header:hydrolase
Chain: J: PDB Molecule:atp synthase subunit b;
PDBTitle: autoinhibited e. coli atp synthase state 1
46c4k0eC_
not modelled 11.1 15
PDB header:transport protein
Chain: C: PDB Molecule:heavy metal cation tricomponent efflux pump znea(czca-
PDBTitle: x-ray crystal structure of a heavy metal efflux pump, crystal form ii
47d1jb0d_
not modelled 10.8 22
Fold:Photosystem I subunit PsaD
Superfamily:Photosystem I subunit PsaD
Family:Photosystem I subunit PsaD
48d1uwda_
not modelled 10.5 18
Fold:Alpha-lytic protease prodomain-like
Superfamily:Fe-S cluster assembly (FSCA) domain-like
Family:PaaD-like
49c2y9jt_
not modelled 10.3 35
PDB header:protein transport
Chain: T: PDB Molecule:protein prgh;
PDBTitle: three-dimensional model of salmonella's needle complex at subnanometer2 resolution
50c6mk7A_
not modelled 9.9 17
PDB header:membrane protein
Chain: A: PDB Molecule:cell division protein ftsx;
PDBTitle: solution structure of the large extracellular loop of ftsx in2 streptococcus pneumoniae
51c5irdA_
not modelled 9.9 18
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: solution structure of rv1466 from mycobacterium tuberculosis, a2 protein associated with [fe-s] complex assembly and repair - seattle3 structural genomics center for infectious disease target4 mytud.17486.a
52d1k3xa1
not modelled 9.9 14
Fold:S13-like H2TH domain
Superfamily:S13-like H2TH domain
Family:Middle domain of MutM-like DNA repair proteins
53c2eq8C_
not modelled 9.7 25
PDB header:oxidoreductase
Chain: C: PDB Molecule:pyruvate dehydrogenase complex, dihydrolipoamide
PDBTitle: crystal structure of lipoamide dehydrogenase from thermus thermophilus2 hb8 with psbdp
54c3twkB_
not modelled 9.7 30
PDB header:hydrolase
Chain: B: PDB Molecule:formamidopyrimidine-dna glycosylase 1;
PDBTitle: crystal structure of arabidopsis thaliana fpg
55c4babC_
not modelled 9.2 19
PDB header:lyase
Chain: C: PDB Molecule:phenylalanine aminomutase;
PDBTitle: redesign of a phenylalanine aminomutase into a beta-phenylalanine2 ammonia lyase
56c5t3bB_
not modelled 8.0 13
PDB header:hydrolase
Chain: B: PDB Molecule:glycoside hydrolase;
PDBTitle: crystal structure of bpgh50
57c6fkip_
not modelled 8.0 15
PDB header:membrane protein
Chain: P: PDB Molecule:atp synthase subunit c, chloroplastic;
PDBTitle: chloroplast f1fo conformation 3
58c1ee8A_
not modelled 7.8 24
PDB header:dna binding protein
Chain: A: PDB Molecule:mutm (fpg) protein;
PDBTitle: crystal structure of mutm (fpg) protein from thermus thermophilus hb8
59c5c5hA_
not modelled 7.3 17
PDB header:ligase
Chain: A: PDB Molecule:2-succinylbenzoate--coa ligase;
PDBTitle: r195k e. coli mene with bound osb-ams
60d2ajta1
not modelled 7.3 21
Fold:Reductase/isomerase/elongation factor common domain
Superfamily:FucI/AraA C-terminal domain-like
Family:AraA C-terminal domain-like
61c1yj7A_
not modelled 7.2 17
PDB header:protein transport
Chain: A: PDB Molecule:escj;
PDBTitle: crystal structure of enteropathogenic e.coli (epec) type iii secretion2 system protein escj
62d2cu6a1
not modelled 6.9 18
Fold:Alpha-lytic protease prodomain-like
Superfamily:Fe-S cluster assembly (FSCA) domain-like
Family:PaaD-like
63c3lnoA_
not modelled 6.6 12
PDB header:unknown function
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of domain of unknown function duf59 from2 bacillus anthracis
64c4bq3A_
not modelled 6.2 17
PDB header:hydrolase
Chain: A: PDB Molecule:b-agarase;
PDBTitle: structural analysis of an exo-beta-agarase
65c5z6pB_
not modelled 6.2 17
PDB header:hydrolase
Chain: B: PDB Molecule:b-agarase;
PDBTitle: the crystal structure of an agarase, agwh50c
66c1k82D_
not modelled 6.2 21
PDB header:hydrolase/dna
Chain: D: PDB Molecule:formamidopyrimidine-dna glycosylase;
PDBTitle: crystal structure of e.coli formamidopyrimidine-dna2 glycosylase (fpg) covalently trapped with dna
67d3duea1
not modelled 6.1 15
Fold:BLIP-like
Superfamily:BT0923-like
Family:BT0923-like
68c4d56A_
not modelled 5.8 22
PDB header:hydrolase
Chain: A: PDB Molecule:apnaa1;
PDBTitle: understanding bi-specificity of a-domains
69c5wmmA_
not modelled 5.7 17
PDB header:biosynthetic protein
Chain: A: PDB Molecule:nrps;
PDBTitle: crystal structure of an adenylation domain interrupted by a2 methylation domain (ama4) from nonribosomal peptide synthetase tios
70d1smpi_
not modelled 5.7 37
Fold:Streptavidin-like
Superfamily:beta-Barrel protease inhibitors
Family:Metalloprotease inhibitor
71c6bzsA_
not modelled 5.7 24
PDB header:transport protein
Chain: A: PDB Molecule:multidrug resistance-associated protein 6;
PDBTitle: human abcc6 nbd1 in apo state
72c5v6fA_
not modelled 5.5 38
PDB header:sugar binding protein
Chain: A: PDB Molecule:hemolysin-related protein;
PDBTitle: crystal structure of the second beta-prism domain of rbmc from v.2 cholerae bound to mannotriose
73c3a46B_
not modelled 5.5 21
PDB header:hydrolase
Chain: B: PDB Molecule:formamidopyrimidine-dna glycosylase;
PDBTitle: crystal structure of mvnei1/thf complex
74c2f5qA_
not modelled 5.5 17
PDB header:hydrolase/dna
Chain: A: PDB Molecule:formamidopyrimidine-dna glycosidase;
PDBTitle: catalytically inactive (e3q) mutm crosslinked to oxog:c2 containing dna cc2
75c3r85H_
not modelled 5.2 33
PDB header:apoptosis
Chain: H: PDB Molecule:heme-binding protein 2;
PDBTitle: crystal structure of human soul bh3 domain in complex with bcl-xl
76c3r85E_
not modelled 5.2 33
PDB header:apoptosis
Chain: E: PDB Molecule:heme-binding protein 2;
PDBTitle: crystal structure of human soul bh3 domain in complex with bcl-xl
77c3r85G_
not modelled 5.2 33
PDB header:apoptosis
Chain: G: PDB Molecule:heme-binding protein 2;
PDBTitle: crystal structure of human soul bh3 domain in complex with bcl-xl
78c3l8cA_
not modelled 5.2 23
PDB header:ligase
Chain: A: PDB Molecule:d-alanine--poly(phosphoribitol) ligase subunit 1;
PDBTitle: structure of probable d-alanine--poly(phosphoribitol) ligase subunit-12 from streptococcus pyogenes

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below