Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2156c_(mraY)_2416404_2417483
DateMon Aug 5 13:25:28 BST 2019
Unique Job ID4105969620b63232
SequenceMRQILIAVAV ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:60.174 Y:57.361 Z:47.535
Model (left) based on template c4j72A_
Top template information
PDB header:transferase
Chain: A: PDB Molecule:phospho-n-acetylmuramoyl-pentapeptide-transferase;
PDBTitle: crystal structure of polyprenyl-phosphate n-acetyl hexosamine 1-2 phosphate transferase
Confidence and coverage
Confidence:100.0% Coverage: 88%
316 residues ( 88% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
3D viewing
Interactive 3D view in JSmol
For other options to view your downloaded structure offline see the FAQ

Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c4j72A_



100.0 31
PDB header:transferase
Chain: A: PDB Molecule:phospho-n-acetylmuramoyl-pentapeptide-transferase;
PDBTitle: crystal structure of polyprenyl-phosphate n-acetyl hexosamine 1-2 phosphate transferase
2c5jnqA_



100.0 35
PDB header:transferase/antibiotic
Chain: A: PDB Molecule:phospho-n-acetylmuramoyl-pentapeptide-transferase;
PDBTitle: mray tunicamycin complex
3c4j72B_



100.0 33
PDB header:transferase
Chain: B: PDB Molecule:phospho-n-acetylmuramoyl-pentapeptide-transferase;
PDBTitle: crystal structure of polyprenyl-phosphate n-acetyl hexosamine 1-2 phosphate transferase
4c5levA_



100.0 19
PDB header:transferase
Chain: A: PDB Molecule:udp-n-acetylglucosamine--dolichyl-phosphate n-
PDBTitle: crystal structure of human udp-n-acetylglucosamine-dolichyl-phosphate2 n-acetylglucosaminephosphotransferase (dpagt1) (v264g mutant)
5c6m97A_



57.5 23
PDB header:transport protein
Chain: A: PDB Molecule:chimera protein of high affinity copper uptake protein 1
PDBTitle: crystal structure of the high-affinity copper transporter ctr1
6c2k74A_



55.0 24
PDB header:membrane protein, oxidoreductase
Chain: A: PDB Molecule:disulfide bond formation protein b;
PDBTitle: solution nmr structure of dsbb-ubiquinone complex
7d1o5ha_



25.6 17
Fold:Methenyltetrahydrofolate cyclohydrolase-like
Superfamily:Methenyltetrahydrofolate cyclohydrolase-like
Family:Methenyltetrahydrofolate cyclohydrolase-like
8c5gasN_



23.7 21
PDB header:hydrolase
Chain: N: PDB Molecule:archaeal/vacuolar-type h+-atpase subunit i;
PDBTitle: thermus thermophilus v/a-atpase, conformation 2
9c4ntfA_



23.0 10
PDB header:lyase
Chain: A: PDB Molecule:leukotriene c4 synthase;
PDBTitle: mus musculus ltc4 synthase in s-hexyl-gsh complex form
10c2uuiA_



21.0 13
PDB header:lyase
Chain: A: PDB Molecule:leukotriene c4 synthase;
PDBTitle: crystal structure of human leukotriene c4 synthase
11c3b29A_



18.6 13
PDB header:lyase
Chain: A: PDB Molecule:leukotriene c4 synthase;
PDBTitle: human leukotriene c4 synthase in complex with dodecyl-beta-d-2 selenomaltoside
12c6btmD_



16.8 14
PDB header:membrane protein
Chain: D: PDB Molecule:alternative complex iii subunit d;
PDBTitle: structure of alternative complex iii from flavobacterium johnsoniae2 (wild type)
13c2pnoH_



16.7 13
PDB header:lyase
Chain: H: PDB Molecule:leukotriene c4 synthase;
PDBTitle: crystal structure of human leukotriene c4 synthase
14c2pnoC_



16.7 13
PDB header:lyase
Chain: C: PDB Molecule:leukotriene c4 synthase;
PDBTitle: crystal structure of human leukotriene c4 synthase
15c2pnoK_



16.7 13
PDB header:lyase
Chain: K: PDB Molecule:leukotriene c4 synthase;
PDBTitle: crystal structure of human leukotriene c4 synthase
16c2pnoB_



16.7 13
PDB header:lyase
Chain: B: PDB Molecule:leukotriene c4 synthase;
PDBTitle: crystal structure of human leukotriene c4 synthase
17c2pnoL_



16.7 13
PDB header:lyase
Chain: L: PDB Molecule:leukotriene c4 synthase;
PDBTitle: crystal structure of human leukotriene c4 synthase
18c2pnoE_



16.7 13
PDB header:lyase
Chain: E: PDB Molecule:leukotriene c4 synthase;
PDBTitle: crystal structure of human leukotriene c4 synthase
19c2pnoF_



16.7 13
PDB header:lyase
Chain: F: PDB Molecule:leukotriene c4 synthase;
PDBTitle: crystal structure of human leukotriene c4 synthase
20c2pnoD_



16.7 13
PDB header:lyase
Chain: D: PDB Molecule:leukotriene c4 synthase;
PDBTitle: crystal structure of human leukotriene c4 synthase
21c2pnoA_



not modelled 16.7 13
PDB header:lyase
Chain: A: PDB Molecule:leukotriene c4 synthase;
PDBTitle: crystal structure of human leukotriene c4 synthase
22c2pnoG_



not modelled 16.7 13
PDB header:lyase
Chain: G: PDB Molecule:leukotriene c4 synthase;
PDBTitle: crystal structure of human leukotriene c4 synthase
23c2pnoJ_



not modelled 16.7 13
PDB header:lyase
Chain: J: PDB Molecule:leukotriene c4 synthase;
PDBTitle: crystal structure of human leukotriene c4 synthase
24d2uuia1



not modelled 16.7 13
Fold:MAPEG domain-like
Superfamily:MAPEG domain-like
Family:MAPEG domain
25c2pnoI_



not modelled 16.7 13
PDB header:lyase
Chain: I: PDB Molecule:leukotriene c4 synthase;
PDBTitle: crystal structure of human leukotriene c4 synthase
26c3hkkA_



not modelled 14.5 13
PDB header:lyase
Chain: A: PDB Molecule:leukotriene c4 synthase;
PDBTitle: structure of human leukotriene c4 synthase in complex with glutathione2 sulfonate
27c3pcvA_



not modelled 14.4 13
PDB header:lyase
Chain: A: PDB Molecule:leukotriene c4 synthase;
PDBTitle: crystal structure analysis of human leukotriene c4 synthase at 1.92 angstrom resolution
28c2uuhA_



not modelled 12.9 13
PDB header:lyase
Chain: A: PDB Molecule:leukotriene c4 synthase;
PDBTitle: crystal structure of human leukotriene c4 synthase in2 complex with substrate glutathione
29c2rnmC_



not modelled 12.3 31
PDB header:protein fibril
Chain: C: PDB Molecule:small s protein;
PDBTitle: structure of the het-s(218-289) prion in its amyloid form obtained by2 solid-state nmr
30c3leoA_



not modelled 10.8 13
PDB header:lyase
Chain: A: PDB Molecule:leukotriene c4 synthase;
PDBTitle: structure of human leukotriene c4 synthase mutant r31q in complex with2 glutathione
31c2jxpA_



not modelled 10.4 28
PDB header:lipoprotein
Chain: A: PDB Molecule:putative lipoprotein b;
PDBTitle: solution nmr structure of uncharacterized lipoprotein b2 from nitrosomonas europaea. northeast structural genomics3 target ner45a
32d2q7ra1



not modelled 8.2 11
Fold:MAPEG domain-like
Superfamily:MAPEG domain-like
Family:MAPEG domain
33c3tu8A_



not modelled 8.2 38
PDB header:unknown function
Chain: A: PDB Molecule:burkholderia lethal factor 1 (blf1);
PDBTitle: crystal structure of the burkholderia lethal factor 1 (blf1)
34d2c42a2



not modelled 7.9 38
Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:PFOR PP module
35c5mlc7_



not modelled 7.5 29
PDB header:ribosome
Chain: 7: PDB Molecule:psrp5alpha, chloroplastic;
PDBTitle: cryo-em structure of the spinach chloroplast ribosome reveals the2 location of plastid-specific ribosomal proteins and extensions
36c3e61A_



not modelled 7.4 21
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative transcriptional repressor of ribose operon;
PDBTitle: crystal structure of a putative transcriptional repressor of ribose2 operon from staphylococcus saprophyticus subsp. saprophyticus
37c3nk4C_



not modelled 7.1 31
PDB header:cell adhesion
Chain: C: PDB Molecule:zona pellucida 3;
PDBTitle: crystal structure of full-length sperm receptor zp3 at 2.0 a2 resolution
38c3nk3C_



not modelled 7.0 31
PDB header:cell adhesion
Chain: C: PDB Molecule:zona pellucida 3;
PDBTitle: crystal structure of full-length sperm receptor zp3 at 2.6 a2 resolution
39c2k21A_



not modelled 6.3 14
PDB header:membrane protein
Chain: A: PDB Molecule:potassium voltage-gated channel subfamily e
PDBTitle: nmr structure of human kcne1 in lmpg micelles at ph 6.0 and2 40 degree c
40c5un8B_



not modelled 6.3 33
PDB header:hydrolase
Chain: B: PDB Molecule:protein o-glcnacase;
PDBTitle: crystal structure of human o-glcnacase in complex with glycopeptide2 p53
41d2cbia2



not modelled 6.0 33
Fold:TIM beta/alpha-barrel
Superfamily:(Trans)glycosidases
Family:alpha-D-glucuronidase/Hyaluronidase catalytic domain
42c5mmi6_



not modelled 5.7 29
PDB header:ribosome
Chain: 6: PDB Molecule:plastid ribosomal protein cl37, psrp5;
PDBTitle: structure of the large subunit of the chloroplast ribosome
43d1kf6d_



not modelled 5.7 17
Fold:Heme-binding four-helical bundle
Superfamily:Fumarate reductase respiratory complex transmembrane subunits
Family:Succinate dehydrogenase/Fumarate reductase transmembrane subunits (SdhC/FrdC and SdhD/FrdD)
44c2mfrA_



not modelled 5.6 24
PDB header:transferase
Chain: A: PDB Molecule:insulin receptor;
PDBTitle: solution structure of the transmembrane domain of the insulin receptor2 in micelles
45d2choa2



not modelled 5.5 27
Fold:TIM beta/alpha-barrel
Superfamily:(Trans)glycosidases
Family:alpha-D-glucuronidase/Hyaluronidase catalytic domain
46c2m0qA_



not modelled 5.4 14
PDB header:membrane protein
Chain: A: PDB Molecule:potassium voltage-gated channel subfamily e member 2;
PDBTitle: solution nmr analysis of intact kcne2 in detergent micelles2 demonstrate a straight transmembrane helix

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below