Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2166c_(-)_2429435_2429866
DateMon Aug 5 13:25:29 BST 2019
Unique Job ID16611007f5e005d7
SequenceMFLGTYTPKL ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:35.058 Y:40.383 Z:46.870
Model (left) based on template c1n0fF_
Top template information
PDB header:biosynthetic protein
Chain: F: PDB Molecule:protein mraz;
PDBTitle: crystal structure of a cell division and cell wall2 biosynthesis protein upf0040 from mycoplasma pneumoniae:3 indication of a novel fold with a possible new conserved4 sequence motif
Confidence and coverage
Confidence:100.0% Coverage: 96%
137 residues ( 96% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c1n0fF_



100.0 28
PDB header:biosynthetic protein
Chain: F: PDB Molecule:protein mraz;
PDBTitle: crystal structure of a cell division and cell wall2 biosynthesis protein upf0040 from mycoplasma pneumoniae:3 indication of a novel fold with a possible new conserved4 sequence motif
2d1n0ea_



100.0 28
Fold:Double-split beta-barrel
Superfamily:AbrB/MazE/MraZ-like
Family:Hypothetical protein MraZ
3c2glwA_



95.7 17
PDB header:transcription
Chain: A: PDB Molecule:92aa long hypothetical protein;
PDBTitle: the solution structure of phs018 from pyrococcus horikoshii
4c2w1tB_



94.5 26
PDB header:transcription
Chain: B: PDB Molecule:stage v sporulation protein t;
PDBTitle: crystal structure of b. subtilis spovt
5d1yfba1



90.5 22
Fold:Double-split beta-barrel
Superfamily:AbrB/MazE/MraZ-like
Family:AbrB N-terminal domain-like
6d2fy9a1



90.4 31
Fold:Double-split beta-barrel
Superfamily:AbrB/MazE/MraZ-like
Family:AbrB N-terminal domain-like
7c2ro5B_



88.2 26
PDB header:transcription
Chain: B: PDB Molecule:stage v sporulation protein t;
PDBTitle: rdc-refined solution structure of the n-terminal dna recognition2 domain of the bacillus subtilis transition-state regulator spovt
8c3oeiB_



58.7 14
PDB header:toxin, protein binding
Chain: B: PDB Molecule:relj (antitoxin rv3357);
PDBTitle: crystal structure of mycobacterium tuberculosis reljk (rv3357-rv3358-2 relbe3)
9c2l66B_



54.5 24
PDB header:transcription regulator
Chain: B: PDB Molecule:transcriptional regulator, abrb family;
PDBTitle: the dna-recognition fold of sso7c4 suggests a new member of spovt-abrb2 superfamily from archaea.
10c2dgyA_



31.6 18
PDB header:translation
Chain: A: PDB Molecule:mgc11102 protein;
PDBTitle: solution structure of the eukaryotic initiation factor 1a2 in mgc11102 protein
11d2a6qb1



31.5 14
Fold:YefM-like
Superfamily:YefM-like
Family:YefM-like
12c3hs2H_



25.3 20
PDB header:antitoxin
Chain: H: PDB Molecule:prevent host death protein;
PDBTitle: crystal structure of phd truncated to residue 57 in an orthorhombic2 space group
13d2a6qa1



23.6 14
Fold:YefM-like
Superfamily:YefM-like
Family:YefM-like
14c4mnoA_



23.0 18
PDB header:translation
Chain: A: PDB Molecule:translation initiation factor 1a;
PDBTitle: crystal structure of aif1a from pyrococcus abyssi
15c2k2eA_



22.8 8
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein bp2786;
PDBTitle: solution nmr structure of bordetella pertussis protein2 bp2786, a mth938-like domain. northeast structural3 genomics consortium target ber31
16c3nnqA_



22.6 29
PDB header:viral protein
Chain: A: PDB Molecule:n-terminal domain of moloney murine leukemia virus
PDBTitle: crystal structure of the n-terminal domain of moloney murine leukemia2 virus integrase, northeast structural genomics consortium target or3
17c3hryA_



22.3 21
PDB header:antitoxin
Chain: A: PDB Molecule:prevent host death protein;
PDBTitle: crystal structure of phd in a trigonal space group and partially2 disordered
18c3qq5A_



17.2 15
PDB header:oxidoreductase
Chain: A: PDB Molecule:small gtp-binding protein;
PDBTitle: crystal structure of the [fefe]-hydrogenase maturation protein hydf
19c2c45F_



15.3 25
PDB header:lyase
Chain: F: PDB Molecule:aspartate 1-decarboxylase;
PDBTitle: native precursor of pyruvoyl dependent aspartate decarboxylase
20c1pt1B_



14.4 10
PDB header:lyase
Chain: B: PDB Molecule:aspartate 1-decarboxylase;
PDBTitle: unprocessed pyruvoyl dependent aspartate decarboxylase with histidine2 11 mutated to alanine
21d2odka1



not modelled 14.1 21
Fold:YefM-like
Superfamily:YefM-like
Family:YefM-like
22c5os9A_



not modelled 14.1 23
PDB header:dna binding protein
Chain: A: PDB Molecule:b3 domain-containing transcription factor nga1;
PDBTitle: structure of the b3 dna-binding domain of nga1
23d1wida_



not modelled 14.0 23
Fold:DNA-binding pseudobarrel domain
Superfamily:DNA-binding pseudobarrel domain
Family:B3 DNA binding domain
24c5l2dA_



not modelled 14.0 28
PDB header:cell adhesion
Chain: A: PDB Molecule:surface-associated protein csha;
PDBTitle: streptococcal surface adhesin - csha nr2
25c3g5oA_



not modelled 13.8 10
PDB header:toxin/antitoxin
Chain: A: PDB Molecule:uncharacterized protein rv2865;
PDBTitle: the crystal structure of the toxin-antitoxin complex relbe2 (rv2865-2 2866) from mycobacterium tuberculosis
26d1s6la1



not modelled 13.8 15
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:MerB N-terminal domain-like
27d2q4qa1



not modelled 13.8 14
Fold:MTH938-like
Superfamily:MTH938-like
Family:MTH938-like
28d1ppya_



not modelled 13.2 10
Fold:Double psi beta-barrel
Superfamily:ADC-like
Family:Pyruvoyl dependent aspartate decarboxylase, ADC
29d2fi9a1



not modelled 13.2 15
Fold:MTH938-like
Superfamily:MTH938-like
Family:MTH938-like
30c2zcpA_



not modelled 13.2 16
PDB header:transferase
Chain: A: PDB Molecule:dehydrosqualene synthase;
PDBTitle: crystal structure of the c(30) carotenoid dehydrosqualene synthase2 from staphylococcus aureus complexed with farnesyl thiopyrophosphate
31c2gm2A_



not modelled 12.9 8
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:conserved hypothetical protein;
PDBTitle: nmr structure of xanthomonas campestris xcc1710: northeast2 structural genomics consortium target xcr35
32d2zgwa1



not modelled 12.9 56
Fold:SH3-like barrel
Superfamily:C-terminal domain of transcriptional repressors
Family:Biotin repressor (BirA)
33c3d55A_



not modelled 12.7 18
PDB header:toxin inhibitor
Chain: A: PDB Molecule:uncharacterized protein rv3357/mt3465;
PDBTitle: crystal structure of m. tuberculosis yefm antitoxin
34c4hd1A_



not modelled 12.6 21
PDB header:transferase
Chain: A: PDB Molecule:squalene synthase hpnc;
PDBTitle: crystal structure of squalene synthase hpnc from alicyclobacillus2 acidocaldarius
35c2odkD_



not modelled 12.4 21
PDB header:structural genomics, unknown function
Chain: D: PDB Molecule:hypothetical protein;
PDBTitle: putative prevent-host-death protein from nitrosomonas europaea
36c2kdnA_



not modelled 12.2 7
PDB header:unknown function
Chain: A: PDB Molecule:putative uncharacterized protein pfe0790c;
PDBTitle: solution structure of pfe0790c, a putative bola-like protein from the2 protozoan parasite plasmodium falciparum.
37c5iysA_



not modelled 11.7 21
PDB header:transferase/transferase inhibitor
Chain: A: PDB Molecule:phytoene synthase;
PDBTitle: crystal structure of a dehydrosqualene synthase in complex with ligand
38c3dwmA_



not modelled 10.6 13
PDB header:transferase
Chain: A: PDB Molecule:9.5 kda culture filtrate antigen cfp10a;
PDBTitle: crystal structure of mycobacterium tuberculosis cyso, an antigen
39c5l6mA_



not modelled 10.6 17
PDB header:hydrolase
Chain: A: PDB Molecule:vapb family protein;
PDBTitle: structure of caulobacter crescentus vapbc1 (vapb1deltac:vapc1 form)
40d1d7qa_



not modelled 10.0 15
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like
41d1lpfa2



not modelled 10.0 23
Fold:FAD/NAD(P)-binding domain
Superfamily:FAD/NAD(P)-binding domain
Family:FAD/NAD-linked reductases, N-terminal and central domains
42c3df0C_



not modelled 10.0 27
PDB header:hydrolase
Chain: C: PDB Molecule:calpastatin;
PDBTitle: calcium-dependent complex between m-calpain and calpastatin
43d2fvta1



not modelled 9.4 14
Fold:MTH938-like
Superfamily:MTH938-like
Family:MTH938-like
44c4n6eB_



not modelled 9.1 14
PDB header:lyase/biosynthetic protein
Chain: B: PDB Molecule:this/moad family protein;
PDBTitle: crystal structure of amycolatopsis orientalis bexx/cyso complex
45c6h3cC_



not modelled 8.9 17
PDB header:signaling protein
Chain: C: PDB Molecule:brisc and brca1-a complex member 2;
PDBTitle: cryo-em structure of the brisc complex bound to shmt2
46c6h9xA_



not modelled 8.9 32
PDB header:ligase
Chain: A: PDB Molecule:serine--trna ligase;
PDBTitle: klebsiella pneumoniae seryl-trna synthetase in complex with the2 intermediate analog 5'-o-(n-(l-seryl)-sulfamoyl)adenosine
47c3j81i_



not modelled 8.2 13
PDB header:ribosome
Chain: I: PDB Molecule:es8;
PDBTitle: cryoem structure of a partial yeast 48s preinitiation complex
48c3errB_



not modelled 7.9 18
PDB header:ligase
Chain: B: PDB Molecule:fusion protein of microtubule binding domain from mouse
PDBTitle: microtubule binding domain from mouse cytoplasmic dynein as a fusion2 with seryl-trna synthetase
49c2oqkA_



not modelled 7.9 13
PDB header:translation
Chain: A: PDB Molecule:putative translation initiation factor eif-1a;
PDBTitle: crystal structure of putative cryptosporidium parvum translation2 initiation factor eif-1a
50c3r5tA_



not modelled 7.8 17
PDB header:metal transport
Chain: A: PDB Molecule:ferric vibriobactin abc transporter, periplasmic ferric
PDBTitle: crystal structure of holo-viup
51c2dq3A_



not modelled 7.4 15
PDB header:ligase
Chain: A: PDB Molecule:seryl-trna synthetase;
PDBTitle: crystal structure of aq_298
52d2gv8a2



not modelled 7.3 19
Fold:FAD/NAD(P)-binding domain
Superfamily:FAD/NAD(P)-binding domain
Family:FAD/NAD-linked reductases, N-terminal and central domains
53d1m7ja1



not modelled 7.0 23
Fold:Composite domain of metallo-dependent hydrolases
Superfamily:Composite domain of metallo-dependent hydrolases
Family:D-aminoacylase
54c3j39O_



not modelled 6.6 15
PDB header:ribosome
Chain: O: PDB Molecule:60s ribosomal protein l13a;
PDBTitle: structure of the d. melanogaster 60s ribosomal proteins
55d1xova1



not modelled 6.5 50
Fold:SH3-like barrel
Superfamily:Prokaryotic SH3-related domain
Family:Ply C-terminal domain-like
56d1v59a2



not modelled 6.5 20
Fold:FAD/NAD(P)-binding domain
Superfamily:FAD/NAD(P)-binding domain
Family:FAD/NAD-linked reductases, N-terminal and central domains
57c3if4C_



not modelled 6.5 31
PDB header:structural genomics, unknown function
Chain: C: PDB Molecule:integron cassette protein hfx_cass5;
PDBTitle: structure from the mobile metagenome of north west arm sewage outfall:2 integron cassette protein hfx_cass5
58c2ubpC_



not modelled 6.5 26
PDB header:hydrolase
Chain: C: PDB Molecule:protein (urease alpha subunit);
PDBTitle: structure of native urease from bacillus pasteurii
59c2dq0A_



not modelled 6.3 12
PDB header:ligase
Chain: A: PDB Molecule:seryl-trna synthetase;
PDBTitle: crystal structure of seryl-trna synthetase from pyrococcus2 horikoshii complexed with a seryl-adenylate analog
60c3qoqC_



not modelled 6.3 32
PDB header:transcription/dna
Chain: C: PDB Molecule:alginate and motility regulator z;
PDBTitle: crystal structure of the transcription factor amrz in complex with the2 18 base pair amrz1 binding site
61d1d6za4



not modelled 6.2 10
Fold:N domain of copper amine oxidase-like
Superfamily:Copper amine oxidase, domain N
Family:Copper amine oxidase, domain N
62d1jt8a_



not modelled 6.2 15
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like
63c4e54B_



not modelled 6.1 21
PDB header:dna binding protein/dna
Chain: B: PDB Molecule:dna damage-binding protein 2;
PDBTitle: damaged dna induced uv-damaged dna-binding protein (uv-ddb)2 dimerization and its roles in chromatinized dna repair
64c2mhdA_



not modelled 6.0 58
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: nmr structure of the protein bacuni_03114 from bacteroides uniformis2 atcc 8492
65d1seta2



not modelled 5.8 15
Fold:Class II aaRS and biotin synthetases
Superfamily:Class II aaRS and biotin synthetases
Family:Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain
66c6bdcA_



not modelled 5.7 23
PDB header:protein transport
Chain: A: PDB Molecule:hcp1;
PDBTitle: structure of hcp1 from flavobacterium johnsoniae
67c3crcB_



not modelled 5.7 28
PDB header:hydrolase
Chain: B: PDB Molecule:protein mazg;
PDBTitle: crystal structure of escherichia coli mazg, the regulator2 of nutritional stress response
68d1lvla2



not modelled 5.7 24
Fold:FAD/NAD(P)-binding domain
Superfamily:FAD/NAD(P)-binding domain
Family:FAD/NAD-linked reductases, N-terminal and central domains
69c1sryB_



not modelled 5.6 16
PDB header:ligase(synthetase)
Chain: B: PDB Molecule:seryl-trna synthetase;
PDBTitle: refined crystal structure of the seryl-trna synthetase from2 thermus thermophilus at 2.5 angstroms resolution
70d2j7ja2



not modelled 5.6 30
Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
71c3zvkG_



not modelled 5.5 11
PDB header:antitoxin/toxin/dna
Chain: G: PDB Molecule:antitoxin of toxin-antitoxin system vapb;
PDBTitle: crystal structure of vapbc2 from rickettsia felis bound to2 a dna fragment from their promoter
72d1ihna_



not modelled 5.5 9
Fold:MTH938-like
Superfamily:MTH938-like
Family:MTH938-like
73c3vqzA_



not modelled 5.4 15
PDB header:hydrolase/hydrolase inhibitor
Chain: A: PDB Molecule:metallo-beta-lactamase;
PDBTitle: crystal structure of metallo-beta-lactamase, smb-1, in a complex with2 mercaptoacetic acid
74c3jywM_



not modelled 5.4 14
PDB header:ribosome
Chain: M: PDB Molecule:60s ribosomal protein l16(a);
PDBTitle: structure of the 60s proteins for eukaryotic ribosome based on cryo-em2 map of thermomyces lanuginosus ribosome at 8.9a resolution
75d1k1da1



not modelled 5.2 29
Fold:Composite domain of metallo-dependent hydrolases
Superfamily:Composite domain of metallo-dependent hydrolases
Family:Hydantoinase (dihydropyrimidinase)
76c5k92C_



not modelled 5.1 22
PDB header:de novo protein
Chain: C: PDB Molecule:apo-(csl16c)3;
PDBTitle: crystal structure of an apo tris-thiolate binding site in a de novo2 three stranded coiled coil peptide
77c5k92B_



not modelled 5.1 22
PDB header:de novo protein
Chain: B: PDB Molecule:apo-(csl16c)3;
PDBTitle: crystal structure of an apo tris-thiolate binding site in a de novo2 three stranded coiled coil peptide
78c5k92A_



not modelled 5.1 22
PDB header:de novo protein
Chain: A: PDB Molecule:apo-(csl16c)3;
PDBTitle: crystal structure of an apo tris-thiolate binding site in a de novo2 three stranded coiled coil peptide

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