Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2177c_(-)_2439290_2439955
DateMon Aug 5 13:25:30 BST 2019
Unique Job ID387a67ed10462058
SequenceMRSKIPDLQR ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:38.715 Y:45.807 Z:35.737
Model (left) based on template c3fhgA_
Top template information
PDB header:dna repair, hydrolase, lyase
Chain: A: PDB Molecule:n-glycosylase/dna lyase;
PDBTitle: crystal structure of sulfolobus solfataricus 8-oxoguanine dna2 glycosylase (ssogg)
Confidence and coverage
Confidence: 95.5% Coverage: 40%
88 residues ( 40% of your sequence) have been modelled with 95.5% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3fhgA_



95.5 11
PDB header:dna repair, hydrolase, lyase
Chain: A: PDB Molecule:n-glycosylase/dna lyase;
PDBTitle: crystal structure of sulfolobus solfataricus 8-oxoguanine dna2 glycosylase (ssogg)
2c2h5xA_



94.8 17
PDB header:dna binding protein
Chain: A: PDB Molecule:holliday junction atp-dependent dna helicase ruva;
PDBTitle: ruva from mycobacterium tuberculosis
3c4itqA_



94.3 19
PDB header:gene regulation, structural protein/dna
Chain: A: PDB Molecule:putative uncharacterized protein sco1480;
PDBTitle: crystal structure of hypothetical protein sco1480 bound to dna
4d1pu6a_



93.7 9
Fold:DNA-glycosylase
Superfamily:DNA-glycosylase
Family:3-Methyladenine DNA glycosylase III (MagIII)
5d2bgwa1



93.6 17
Fold:SAM domain-like
Superfamily:RuvA domain 2-like
Family:Hef domain-like
6c1d8lA_



92.5 21
PDB header:gene regulation
Chain: A: PDB Molecule:protein (holliday junction dna helicase ruva);
PDBTitle: e. coli holliday junction binding protein ruva nh2 region lacking2 domain iii
7d1x2ia1



92.3 10
Fold:SAM domain-like
Superfamily:RuvA domain 2-like
Family:Hef domain-like
8c1rrqA_



92.2 13
PDB header:hydrolase/dna
Chain: A: PDB Molecule:muty;
PDBTitle: muty adenine glycosylase in complex with dna containing an2 a:oxog pair
9c1ixrA_



92.2 25
PDB header:hydrolase
Chain: A: PDB Molecule:holliday junction dna helicase ruva;
PDBTitle: ruva-ruvb complex
10d1cuka2



92.2 19
Fold:SAM domain-like
Superfamily:RuvA domain 2-like
Family:DNA helicase RuvA subunit, middle domain
11d1bvsa2



92.2 18
Fold:SAM domain-like
Superfamily:RuvA domain 2-like
Family:DNA helicase RuvA subunit, middle domain
12d1ixra1



92.0 15
Fold:SAM domain-like
Superfamily:RuvA domain 2-like
Family:DNA helicase RuvA subunit, middle domain
13c2mutA_



91.5 23
PDB header:hydrolase
Chain: A: PDB Molecule:dna excision repair protein ercc-1;
PDBTitle: solution structure of the f231l mutant ercc1-xpf dimerization region
14c1ixrB_



91.3 15
PDB header:hydrolase
Chain: B: PDB Molecule:holliday junction dna helicase ruva;
PDBTitle: ruva-ruvb complex
15d1orna_



91.3 20
Fold:DNA-glycosylase
Superfamily:DNA-glycosylase
Family:Endonuclease III
16d2aq0a1



90.7 12
Fold:SAM domain-like
Superfamily:RuvA domain 2-like
Family:Hef domain-like
17c3kntC_



90.2 19
PDB header:hydrolase, lyase/dna
Chain: C: PDB Molecule:n-glycosylase/dna lyase;
PDBTitle: crystal structure of methanocaldococcus jannaschii 8-oxoguanine2 glycosylase/lyase in complex with 15mer dna containing 8-oxoguanine
18c4b24A_



90.0 17
PDB header:hydrolase/dna
Chain: A: PDB Molecule:probable dna-3-methyladenine glycosylase 2;
PDBTitle: unprecedented sculpting of dna at abasic sites by dna glycoslase2 homolog mag2
19d1kfta_



89.9 17
Fold:SAM domain-like
Superfamily:RuvA domain 2-like
Family:Excinuclease UvrC C-terminal domain
20c1kftA_



89.9 17
PDB header:dna binding protein
Chain: A: PDB Molecule:excinuclease abc subunit c;
PDBTitle: solution structure of the c-terminal domain of uvrc from e-2 coli
21c1hjpA_



not modelled 89.8 12
PDB header:dna recombination
Chain: A: PDB Molecule:ruva;
PDBTitle: holliday junction binding protein ruva from e. coli
22d1keaa_



not modelled 89.8 20
Fold:DNA-glycosylase
Superfamily:DNA-glycosylase
Family:Mismatch glycosylase
23c2nrzB_



not modelled 89.6 17
PDB header:hydrolase
Chain: B: PDB Molecule:uvrabc system protein c;
PDBTitle: crystal structure of the c-terminal half of uvrc bound to its2 catalytic divalent cation
24d1pzna1



not modelled 89.3 17
Fold:SAM domain-like
Superfamily:Rad51 N-terminal domain-like
Family:DNA repair protein Rad51, N-terminal domain
25c3n0uB_



not modelled 89.2 16
PDB header:hydrolase, lyase
Chain: B: PDB Molecule:probable n-glycosylase/dna lyase;
PDBTitle: crystal structure of tm1821, the 8-oxoguanine dna glycosylase of2 thermotoga maritima
26c2lyhA_



not modelled 88.9 17
PDB header:dna binding protein
Chain: A: PDB Molecule:fanconi anemia-associated protein of 24 kda;
PDBTitle: structure of faap24 residues 141-215
27d2i1qa1



not modelled 88.6 10
Fold:SAM domain-like
Superfamily:Rad51 N-terminal domain-like
Family:DNA repair protein Rad51, N-terminal domain
28d1kg2a_



not modelled 88.5 20
Fold:DNA-glycosylase
Superfamily:DNA-glycosylase
Family:Mismatch glycosylase
29d2duya1



not modelled 88.5 21
Fold:SAM domain-like
Superfamily:RuvA domain 2-like
Family:ComEA-like
30c5ganF_



not modelled 88.4 10
PDB header:transcription
Chain: F: PDB Molecule:pre-mrna-processing factor 31;
PDBTitle: the overall structure of the yeast spliceosomal u4/u6.u5 tri-snrnp at2 3.7 angstrom
31d2abka_



not modelled 88.4 15
Fold:DNA-glycosylase
Superfamily:DNA-glycosylase
Family:Endonuclease III
32d2a1jb1



not modelled 88.3 24
Fold:SAM domain-like
Superfamily:RuvA domain 2-like
Family:Hef domain-like
33c2w9mB_



not modelled 88.2 15
PDB header:dna replication
Chain: B: PDB Molecule:polymerase x;
PDBTitle: structure of family x dna polymerase from deinococcus2 radiodurans
34d2axtu1



not modelled 87.6 14
Fold:SAM domain-like
Superfamily:PsbU/PolX domain-like
Family:PsbU-like
35c5o9zH_



not modelled 87.3 17
PDB header:splicing
Chain: H: PDB Molecule:u4/u6 small nuclear ribonucleoprotein prp31;
PDBTitle: cryo-em structure of a pre-catalytic human spliceosome primed for2 activation (b complex)
36c3auoB_



not modelled 86.8 19
PDB header:transferase/dna
Chain: B: PDB Molecule:dna polymerase beta family (x family);
PDBTitle: dna polymerase x from thermus thermophilus hb8 ternary complex with 1-2 nt gapped dna and ddgtp
37d3bzka1



not modelled 86.2 22
Fold:SAM domain-like
Superfamily:RuvA domain 2-like
Family:Tex HhH-containing domain-like
38c4unfA_



not modelled 85.8 14
PDB header:lyase
Chain: A: PDB Molecule:endonuclease iii-1;
PDBTitle: crystal structure of deinococcus radiodurans endonuclease iii-1
39d1a77a1



not modelled 85.8 17
Fold:SAM domain-like
Superfamily:5' to 3' exonuclease, C-terminal subdomain
Family:5' to 3' exonuclease, C-terminal subdomain
40d1ul1x1



not modelled 85.6 33
Fold:SAM domain-like
Superfamily:5' to 3' exonuclease, C-terminal subdomain
Family:5' to 3' exonuclease, C-terminal subdomain
41d1mc8a1



not modelled 85.6 23
Fold:SAM domain-like
Superfamily:5' to 3' exonuclease, C-terminal subdomain
Family:5' to 3' exonuclease, C-terminal subdomain
42c4p4oA_



not modelled 85.6 18
PDB header:transferase/dna
Chain: A: PDB Molecule:dna polymerase beta;
PDBTitle: crystal structure of leishmania infantum polymerase beta: ternary gap2 complex
43d1rxwa1



not modelled 85.4 28
Fold:SAM domain-like
Superfamily:5' to 3' exonuclease, C-terminal subdomain
Family:5' to 3' exonuclease, C-terminal subdomain
44c3n5nX_



not modelled 85.3 21
PDB header:hydrolase
Chain: X: PDB Molecule:a/g-specific adenine dna glycosylase;
PDBTitle: crystal structure analysis of the catalytic domain and interdomain2 connector of human muty homologue
45c3icxB_



not modelled 85.2 15
PDB header:rna binding protein
Chain: B: PDB Molecule:pre mrna splicing protein;
PDBTitle: crystal structure of sulfolobus solfataricus nop5 (135-380)
46c2ziuA_



not modelled 85.0 17
PDB header:hydrolase
Chain: A: PDB Molecule:mus81 protein;
PDBTitle: crystal structure of the mus81-eme1 complex
47d2noha1



not modelled 84.6 14
Fold:DNA-glycosylase
Superfamily:DNA-glycosylase
Family:DNA repair glycosylase, 2 C-terminal domains
48c4bxoA_



not modelled 84.3 11
PDB header:hydrolase/dna
Chain: A: PDB Molecule:fanconi anemia group m protein;
PDBTitle: architecture and dna recognition elements of the fanconi anemia fancm-2 faap24 complex
49d1b43a1



not modelled 84.1 27
Fold:SAM domain-like
Superfamily:5' to 3' exonuclease, C-terminal subdomain
Family:5' to 3' exonuclease, C-terminal subdomain
50d2ozbb1



not modelled 84.1 17
Fold:Nop domain
Superfamily:Nop domain
Family:Nop domain
51d2edua1



not modelled 83.8 17
Fold:SAM domain-like
Superfamily:RuvA domain 2-like
Family:ComEA-like
52c3s6iA_



not modelled 83.8 19
PDB header:hydrolase/dna
Chain: A: PDB Molecule:dna-3-methyladenine glycosylase 1;
PDBTitle: schizosaccaromyces pombe 3-methyladenine dna glycosylase (mag1) in2 complex with abasic-dna.
53d1rrqa1



not modelled 83.5 9
Fold:DNA-glycosylase
Superfamily:DNA-glycosylase
Family:Mismatch glycosylase
54c1s5lu_



not modelled 83.1 13
PDB header:photosynthesis
Chain: U: PDB Molecule:photosystem ii 12 kda extrinsic protein;
PDBTitle: architecture of the photosynthetic oxygen evolving center
55c4uobA_



not modelled 82.6 25
PDB header:lyase
Chain: A: PDB Molecule:endonuclease iii-3;
PDBTitle: crystal structure of deinococcus radiodurans endonuclease iii-3
56c4q0rB_



not modelled 82.6 29
PDB header:hydrolase/dna
Chain: B: PDB Molecule:dna repair protein rad2;
PDBTitle: the catalytic core of rad2 (complex i)
57d1xo1a1



not modelled 81.2 35
Fold:SAM domain-like
Superfamily:5' to 3' exonuclease, C-terminal subdomain
Family:5' to 3' exonuclease, C-terminal subdomain
58c3id5E_



not modelled 81.1 15
PDB header:transferase/ribosomal protein/rna
Chain: E: PDB Molecule:pre mrna splicing protein;
PDBTitle: crystal structure of sulfolobus solfataricus c/d rnp assembled with2 nop5, fibrillarin, l7ae and a split half c/d rna
59c2nnwC_



not modelled 81.0 20
PDB header:transferase
Chain: C: PDB Molecule:nop5/nop56 related protein;
PDBTitle: alternative conformations of nop56/58-fibrillarin complex and2 implication for induced-fit assenly of box c/d rnps
60c4bxoB_



not modelled 80.5 17
PDB header:hydrolase/dna
Chain: B: PDB Molecule:fanconi anemia-associated protein of 24 kda;
PDBTitle: architecture and dna recognition elements of the fanconi anemia fancm-2 faap24 complex
61c5t9jB_



not modelled 80.4 21
PDB header:hydrolase
Chain: B: PDB Molecule:flap endonuclease gen homolog 1;
PDBTitle: crystal structure of human gen1 in complex with holliday junction dna2 in the upper interface
62c2ihmA_



not modelled 80.0 20
PDB header:transferase/dna
Chain: A: PDB Molecule:dna polymerase mu;
PDBTitle: polymerase mu in ternary complex with gapped 11mer dna duplex and2 bound incoming nucleotide
63c3f10A_



not modelled 79.9 16
PDB header:hydrolase, lyase
Chain: A: PDB Molecule:8-oxoguanine-dna-glycosylase;
PDBTitle: crystal structure of clostridium acetobutylicum 8-oxoguanine dna2 glycosylase in complex with 8-oxoguanosine
64d1mpga1



not modelled 79.2 18
Fold:DNA-glycosylase
Superfamily:DNA-glycosylase
Family:DNA repair glycosylase, 2 C-terminal domains
65d1ngna_



not modelled 78.7 11
Fold:DNA-glycosylase
Superfamily:DNA-glycosylase
Family:Mismatch glycosylase
66c8iczA_



not modelled 78.3 20
PDB header:transferase/dna
Chain: A: PDB Molecule:protein (dna polymerase beta (e.c.2.7.7.7));
PDBTitle: dna polymerase beta (pol b) (e.c.2.7.7.7) complexed with2 seven base pairs of dna; soaked in the presence of of datp3 (1 millimolar), mncl2 (5 millimolar), and lithium sulfate4 (75 millimolar)
67c1kdhA_



not modelled 78.2 20
PDB header:transferase/dna
Chain: A: PDB Molecule:terminal deoxynucleotidyltransferase short
PDBTitle: binary complex of murine terminal deoxynucleotidyl2 transferase with a primer single stranded dna
68c6nd4a_



not modelled 78.1 17
PDB header:ribosome
Chain: A: PDB Molecule:mpp10;
PDBTitle: conformational switches control early maturation of the eukaryotic2 small ribosomal subunit
69c5kpeA_



not modelled 78.0 17
PDB header:de novo protein
Chain: A: PDB Molecule:de novo beta sheet design protein or664;
PDBTitle: solution nmr structure of denovo beta sheet design protein, northeast2 structural genomics consortium (nesg) target or664
70c1ko9A_



not modelled 76.4 13
PDB header:hydrolase
Chain: A: PDB Molecule:8-oxoguanine dna glycosylase;
PDBTitle: native structure of the human 8-oxoguanine dna glycosylase2 hogg1
71c1yqmA_



not modelled 76.3 14
PDB header:hydrolase/dna
Chain: A: PDB Molecule:n-glycosylase/dna lyase;
PDBTitle: catalytically inactive human 8-oxoguanine glycosylase2 crosslinked to 7-deazaguanine containing dna
72c2bcuA_



not modelled 76.2 27
PDB header:transferase, lyase/dna
Chain: A: PDB Molecule:dna polymerase lambda;
PDBTitle: dna polymerase lambda in complex with a dna duplex2 containing an unpaired damp and a t:t mismatch
73c6nd4b_



not modelled 76.2 12
PDB header:ribosome
Chain: B: PDB Molecule:
PDBTitle: conformational switches control early maturation of the eukaryotic2 small ribosomal subunit
74c4ejyA_



not modelled 75.6 27
PDB header:hydrolase/dna
Chain: A: PDB Molecule:3-methyladenine dna glycosylase;
PDBTitle: structure of mbogg1 in complex with high affinity dna ligand
75c1nomA_



not modelled 75.4 23
PDB header:nucleotidyltransferase
Chain: A: PDB Molecule:dna polymerase beta;
PDBTitle: dna polymerase beta (pol b) (e.c.2.7.7.7), 31-kd domain; soaked in the2 presence of mncl2 (5 millimolar)
76c1vddC_



not modelled 75.0 14
PDB header:recombination
Chain: C: PDB Molecule:recombination protein recr;
PDBTitle: crystal structure of recombinational repair protein recr
77c1ut8B_



not modelled 74.9 33
PDB header:hydrolase
Chain: B: PDB Molecule:exodeoxyribonuclease;
PDBTitle: divalent metal ions (zinc) bound to t5 5'-exonuclease
78d1i94m_



not modelled 74.7 24
Fold:S13-like H2TH domain
Superfamily:S13-like H2TH domain
Family:Ribosomal protein S13
79c2yg8B_



not modelled 74.7 18
PDB header:hydrolase
Chain: B: PDB Molecule:dna-3-methyladenine glycosidase ii, putative;
PDBTitle: structure of an unusual 3-methyladenine dna glycosylase ii (alka) from2 deinococcus radiodurans
80c2jhnB_



not modelled 74.1 27
PDB header:hydrolase
Chain: B: PDB Molecule:3-methyladenine dna-glycosylase;
PDBTitle: 3-methyladenine dna-glycosylase from archaeoglobus fulgidus
81c5zvqA_



not modelled 73.6 14
PDB header:recombination
Chain: A: PDB Molecule:recombination protein recr;
PDBTitle: crystal structure of recombination mediator protein recr
82d1vdda_



not modelled 73.0 14
Fold:Recombination protein RecR
Superfamily:Recombination protein RecR
Family:Recombination protein RecR
83c2csdB_



not modelled 72.8 17
PDB header:isomerase
Chain: B: PDB Molecule:topoisomerase v;
PDBTitle: crystal structure of topoisomerase v (61 kda fragment)
84c2oceA_



not modelled 72.8 22
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein pa5201;
PDBTitle: crystal structure of tex family protein pa5201 from2 pseudomonas aeruginosa
85c3iz6M_



not modelled 72.7 24
PDB header:ribosome
Chain: M: PDB Molecule:40s ribosomal protein s18 (s13p);
PDBTitle: localization of the small subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome
86c6c34A_



not modelled 72.5 26
PDB header:dna binding protein
Chain: A: PDB Molecule:5'-3' exonuclease;
PDBTitle: mycobacterium smegmatis dna flap endonuclease mutant d125n
87c1rxvA_



not modelled 72.2 28
PDB header:hydrolase/dna
Chain: A: PDB Molecule:flap structure-specific endonuclease;
PDBTitle: crystal structure of a. fulgidus fen-1 bound to dna
88c2bhnD_



not modelled 72.1 15
PDB header:hydrolase
Chain: D: PDB Molecule:xpf endonuclease;
PDBTitle: xpf from aeropyrum pernix
89c2xznM_



not modelled 71.2 24
PDB header:ribosome
Chain: M: PDB Molecule:rps18e;
PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 2
90d1dgsa1



not modelled 71.2 19
Fold:SAM domain-like
Superfamily:RuvA domain 2-like
Family:NAD+-dependent DNA ligase, domain 3
91c5z2vB_



not modelled 71.1 14
PDB header:dna binding protein
Chain: B: PDB Molecule:recombination protein recr;
PDBTitle: crystal structure of recr from pseudomonas aeruginosa pao1
92c2izoA_



not modelled 71.0 33
PDB header:hydrolase
Chain: A: PDB Molecule:flap structure-specific endonuclease;
PDBTitle: structure of an archaeal pcna1-pcna2-fen1 complex
93c1b43A_



not modelled 70.8 27
PDB header:transferase
Chain: A: PDB Molecule:protein (fen-1);
PDBTitle: fen-1 from p. furiosus
94c5o5jM_



not modelled 70.3 24
PDB header:ribosome
Chain: M: PDB Molecule:30s ribosomal protein s13;
PDBTitle: structure of the 30s small ribosomal subunit from mycobacterium2 smegmatis
95c3bqsB_



not modelled 69.4 11
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of an uncharacterized protein from2 listeria monocytogenes, trigonal form
96c2zixA_



not modelled 69.3 15
PDB header:hydrolase
Chain: A: PDB Molecule:crossover junction endonuclease mus81;
PDBTitle: crystal structure of the mus81-eme1 complex
97d2bcqa2



not modelled 68.9 27
Fold:SAM domain-like
Superfamily:PsbU/PolX domain-like
Family:DNA polymerase beta-like, second domain
98c3zddA_



not modelled 68.9 24
PDB header:hydrolase/dna
Chain: A: PDB Molecule:protein xni;
PDBTitle: structure of e. coli exoix in complex with the palindromic 5ov62 oligonucleotide and potassium
99c1ul1Y_



not modelled 68.7 33
PDB header:hydrolase/dna binding protein
Chain: Y: PDB Molecule:flap endonuclease-1;
PDBTitle: crystal structure of the human fen1-pcna complex
100c1mpgB_



not modelled 68.6 19
PDB header:hydrolase
Chain: B: PDB Molecule:3-methyladenine dna glycosylase ii;
PDBTitle: 3-methyladenine dna glycosylase ii from escherichia coli
101c3oryA_



not modelled 68.5 18
PDB header:hydrolase
Chain: A: PDB Molecule:flap endonuclease 1;
PDBTitle: crystal structure of flap endonuclease 1 from hyperthermophilic2 archaeon desulfurococcus amylolyticus
102c3q8lA_



not modelled 68.3 33
PDB header:hydrolase/dna
Chain: A: PDB Molecule:flap endonuclease 1;
PDBTitle: crystal structure of human flap endonuclease fen1 (wt) in complex with2 substrate 5'-flap dna, sm3+, and k+
103c3j20O_



not modelled 67.8 28
PDB header:ribosome
Chain: O: PDB Molecule:30s ribosomal protein s13p;
PDBTitle: promiscuous behavior of proteins in archaeal ribosomes revealed by2 cryo-em: implications for evolution of eukaryotic ribosomes (30s3 ribosomal subunit)
104d1cmwa1



not modelled 67.7 23
Fold:SAM domain-like
Superfamily:5' to 3' exonuclease, C-terminal subdomain
Family:5' to 3' exonuclease, C-terminal subdomain
105c3psfA_



not modelled 67.4 10
PDB header:transcription
Chain: A: PDB Molecule:transcription elongation factor spt6;
PDBTitle: crystal structure of the spt6 core domain from saccharomyces2 cerevisiae, form spt6(236-1259)
106c5xyiS_



not modelled 66.7 28
PDB header:ribosome
Chain: S: PDB Molecule:ribosomal protein s13p/s18e, putative;
PDBTitle: small subunit of trichomonas vaginalis ribosome
107d2gy9m1



not modelled 66.7 21
Fold:S13-like H2TH domain
Superfamily:S13-like H2TH domain
Family:Ribosomal protein S13
108c2zkqm_



not modelled 66.5 21
PDB header:ribosomal protein/rna
Chain: M: PDB Molecule:
PDBTitle: structure of a mammalian ribosomal 40s subunit within an 80s complex2 obtained by docking homology models of the rna and proteins into an3 8.7 a cryo-em map
109c1a77A_



not modelled 65.6 18
PDB header:5'-3' exo/endo nuclease
Chain: A: PDB Molecule:flap endonuclease-1 protein;
PDBTitle: flap endonuclease-1 from methanococcus jannaschii
110c4wa8A_



not modelled 65.2 29
PDB header:hydrolase
Chain: A: PDB Molecule:flap endonuclease 1;
PDBTitle: methanopyrus kandleri fen-1 nuclease
111d1szpa1



not modelled 62.8 17
Fold:SAM domain-like
Superfamily:Rad51 N-terminal domain-like
Family:DNA repair protein Rad51, N-terminal domain
112d2fmpa2



not modelled 60.8 20
Fold:SAM domain-like
Superfamily:PsbU/PolX domain-like
Family:DNA polymerase beta-like, second domain
113d1d8ba_



not modelled 60.5 7
Fold:SAM domain-like
Superfamily:HRDC-like
Family:HRDC domain from helicases
114d2vana1



not modelled 60.1 19
Fold:SAM domain-like
Superfamily:PsbU/PolX domain-like
Family:DNA polymerase beta-like, second domain
115d2uubm1



not modelled 58.4 24
Fold:S13-like H2TH domain
Superfamily:S13-like H2TH domain
Family:Ribosomal protein S13
116c3qeaZ_



not modelled 57.9 23
PDB header:hydrolase/dna
Chain: Z: PDB Molecule:exonuclease 1;
PDBTitle: crystal structure of human exonuclease 1 exo1 (wt) in complex with dna2 (complex ii)
117c5ol9A_



not modelled 56.8 9
PDB header:transcription
Chain: A: PDB Molecule:transcription elongation factor, mitochondrial;
PDBTitle: structure of human mitochondrial transcription elongation factor2 (tefm) n-terminal domain
118d2a1ja1



not modelled 56.0 13
Fold:SAM domain-like
Superfamily:RuvA domain 2-like
Family:Hef domain-like
119c6gmhM_



not modelled 55.7 16
PDB header:transcription
Chain: M: PDB Molecule:transcription elongation factor spt6,transcription
PDBTitle: structure of activated transcription complex pol ii-dsif-paf-spt6
120c3psiA_



not modelled 54.7 10
PDB header:transcription
Chain: A: PDB Molecule:transcription elongation factor spt6;
PDBTitle: crystal structure of the spt6 core domain from saccharomyces2 cerevisiae, form spt6(239-1451)

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite