Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2180c_(-)_2442335_2443222
DateMon Aug 5 13:25:30 BST 2019
Unique Job ID57b3a5d822df9d1b
SequenceLEVFHWLQHD ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:10.364 Y:29.777 Z:18.680
Model (left) based on template c2cnyB_
Top template information
PDB header:fibril protein
Chain: B: PDB Molecule:putative outer membrane protein;
PDBTitle: salmonella enterica safa pilin in complex with a 19-residue2 safa nte peptide (i15a mutant)
Confidence and coverage
Confidence: 21.3% Coverage: 3%
10 residues ( 3% of your sequence) have been modelled with 21.3% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c2cnyB_
21.3 60
PDB header:fibril protein
Chain: B: PDB Molecule:putative outer membrane protein;
PDBTitle: salmonella enterica safa pilin in complex with a 19-residue2 safa nte peptide (i15a mutant)
2c2dw3A_
17.0 33
PDB header:photosynthesis
Chain: A: PDB Molecule:intrinsic membrane protein pufx;
PDBTitle: solution structure of the rhodobacter sphaeroides pufx2 membrane protein
3d2axtk1
15.3 45
Fold:Single transmembrane helix
Superfamily:Photosystem II reaction center protein K, PsbK
Family:PsbK-like
4c4y3uB_
14.7 29
PDB header:membrane protein
Chain: B: PDB Molecule:cardiac phospholamban;
PDBTitle: the structure of phospholamban bound to the calcium pump serca1a
5c3jcuk_
14.5 31
PDB header:membrane protein
Chain: K: PDB Molecule:photosystem ii reaction center protein k;
PDBTitle: cryo-em structure of spinach psii-lhcii supercomplex at 3.2 angstrom2 resolution
6c5jnqA_
13.5 10
PDB header:transferase/antibiotic
Chain: A: PDB Molecule:phospho-n-acetylmuramoyl-pentapeptide-transferase;
PDBTitle: mray tunicamycin complex
7c4j72A_
13.3 11
PDB header:transferase
Chain: A: PDB Molecule:phospho-n-acetylmuramoyl-pentapeptide-transferase;
PDBTitle: crystal structure of polyprenyl-phosphate n-acetyl hexosamine 1-2 phosphate transferase
8c3a0bK_
11.6 23
PDB header:electron transport
Chain: K: PDB Molecule:photosystem ii reaction center protein k;
PDBTitle: crystal structure of br-substituted photosystem ii complex
9c3a0hK_
11.6 23
PDB header:electron transport
Chain: K: PDB Molecule:photosystem ii reaction center protein k;
PDBTitle: crystal structure of i-substituted photosystem ii complex
10c3a0bk_
11.6 23
PDB header:electron transport
Chain: K: PDB Molecule:photosystem ii reaction center protein k;
PDBTitle: crystal structure of br-substituted photosystem ii complex
11c1zllE_
11.0 29
PDB header:membrane protein/signaling protein
Chain: E: PDB Molecule:cardiac phospholamban;
PDBTitle: nmr structure of unphosphorylated human phospholamban2 pentamer
12d1d8wa_
10.5 19
Fold:TIM beta/alpha-barrel
Superfamily:Xylose isomerase-like
Family:L-rhamnose isomerase
13c4kv3A_
10.2 38
PDB header:protein transport
Chain: A: PDB Molecule:chimera fusion protein of esx-1 secretion system protein
PDBTitle: ubiquitin-like domain of the mycobacterium tuberculosis type vii2 secretion system protein eccd1 as maltose-binding protein fusion
14c2bzwB_
9.3 39
PDB header:transcription
Chain: B: PDB Molecule:bcl2-antagonist of cell death;
PDBTitle: the crystal structure of bcl-xl in complex with full-length bad
15c3a0hJ_
9.2 27
PDB header:electron transport
Chain: J: PDB Molecule:photosystem ii reaction center protein j;
PDBTitle: crystal structure of i-substituted photosystem ii complex
16d2axtj1
9.2 27
Fold:Single transmembrane helix
Superfamily:Photosystem II reaction center protein J, PsbJ
Family:PsbJ-like
17c2ziiA_
9.1 31
PDB header:protein transport
Chain: A: PDB Molecule:vacuolar protein sorting-associated protein 74;
PDBTitle: crystal structure of yeast vps74-n-term truncation variant
18c6k1hF_
8.5 30
PDB header:protein transport
Chain: F: PDB Molecule:pts system mannose-specific eiid component;
PDBTitle: structure of membrane protein
19c2zihC_
8.5 31
PDB header:protein transport
Chain: C: PDB Molecule:vacuolar protein sorting-associated protein 74;
PDBTitle: crystal structure of yeast vps74
20c3rqrA_
8.5 15
PDB header:metal transport
Chain: A: PDB Molecule:ryanodine receptor 1;
PDBTitle: crystal structure of the ryr domain of the rabbit ryanodine receptor
21c3a0hk_
not modelled 8.3 45
PDB header:electron transport
Chain: K: PDB Molecule:photosystem ii reaction center protein k;
PDBTitle: crystal structure of i-substituted photosystem ii complex
22d2q07a2
not modelled 7.8 22
Fold:Uracil-DNA glycosylase-like
Superfamily:Uracil-DNA glycosylase-like
Family:AF0587 domain-like
23d1g7oa1
not modelled 7.8 14
Fold:GST C-terminal domain-like
Superfamily:GST C-terminal domain-like
Family:Glutathione S-transferase (GST), C-terminal domain
24c1vd9A_
not modelled 7.2 50
PDB header:transcription
Chain: A: PDB Molecule:fibroin-modulator-binding-protein-1;
PDBTitle: solution structure of fmbp-1 tandem repeat 3
25d1b93a_
not modelled 6.0 19
Fold:Methylglyoxal synthase-like
Superfamily:Methylglyoxal synthase-like
Family:Methylglyoxal synthase, MgsA
26c2jlnA_
not modelled 6.0 17
PDB header:membrane protein
Chain: A: PDB Molecule:mhp1;
PDBTitle: structure of mhp1, a nucleobase-cation-symport-1 family2 transporter
27c2qn5B_
not modelled 5.9 44
PDB header:hydrolase inhibitor/hydrolase
Chain: B: PDB Molecule:bowman-birk type bran trypsin inhibitor;
PDBTitle: crystal structure and functional study of the bowman-birk2 inhibitor from rice bran in complex with bovine trypsin
28c2lw6A_
not modelled 5.8 40
PDB header:apoptosis
Chain: A: PDB Molecule:avrpiz-t protein;
PDBTitle: solution structure of an avirulence protein avrpiz-t from pathogen2 magnaportheoryzae
29d2cc6a1
not modelled 5.8 50
Fold:Dodecin subunit-like
Superfamily:Dodecin-like
Family:Dodecin-like
30c3gioA_
not modelled 5.7 50
PDB header:dna binding protein
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of the tnf-alpha inducing protein (tip2 alpha) from helicobacter pylori
31d1m9sa2
not modelled 5.5 26
Fold:SH3-like barrel
Superfamily:Prokaryotic SH3-related domain
Family:GW domain
32c1tx6J_
not modelled 5.5 33
PDB header:hydrolase/protein binding
Chain: J: PDB Molecule:bowman-birk type trypsin inhibitor;
PDBTitle: trypsin:bbi complex
33c4pkcC_
not modelled 5.3 67
PDB header:lyase
Chain: C: PDB Molecule:tutf;
PDBTitle: benzylsuccinate alpha-gamma complex
34d1iq3a_
not modelled 5.2 30
Fold:EF Hand-like
Superfamily:EF-hand
Family:Eps15 homology domain (EH domain)
35c4pkfC_
not modelled 5.2 67
PDB header:lyase
Chain: C: PDB Molecule:tutf;
PDBTitle: benzylsuccinate synthase alpha-beta-gamma complex

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below