Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2209_(-)_2473408_2474946
DateMon Aug 5 13:25:33 BST 2019
Unique Job IDa6e70171f4d4ab8f
SequenceMPASRLVRQV ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:59.183 Y:67.686 Z:70.483
Model (left) based on template d1pw4a_
Top template information
Fold:MFS general substrate transporter
Superfamily:MFS general substrate transporter
Family:Glycerol-3-phosphate transporter
Confidence and coverage
Confidence:100.0% Coverage: 81%
417 residues ( 81% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d1pw4a_
100.0 10
Fold:MFS general substrate transporter
Superfamily:MFS general substrate transporter
Family:Glycerol-3-phosphate transporter
2c4zp0A_
100.0 11
PDB header:transport protein
Chain: A: PDB Molecule:multidrug transporter mdfa;
PDBTitle: crystal structure of e. coli multidrug transporter mdfa in complex2 with deoxycholate
3c3wdoA_
100.0 13
PDB header:transport protein
Chain: A: PDB Molecule:mfs transporter;
PDBTitle: structure of e. coli yajr transporter
4c6e9oA_
100.0 13
PDB header:membrane protein
Chain: A: PDB Molecule:d-galactonate transport;
PDBTitle: e. coli d-galactonate:proton symporter mutant e133q in the outward2 substrate-bound form
5c4ldsB_
100.0 13
PDB header:transport protein, membrane protein
Chain: B: PDB Molecule:bicyclomycin resistance protein tcab;
PDBTitle: the inward-facing structure of the glucose transporter from2 staphylococcus epidermidis
6c3o7pA_
100.0 10
PDB header:transport protein
Chain: A: PDB Molecule:l-fucose-proton symporter;
PDBTitle: crystal structure of the e.coli fucose:proton symporter, fucp (n162a)
7c6g9xB_
100.0 9
PDB header:membrane protein
Chain: B: PDB Molecule:major facilitator superfamily mfs_1;
PDBTitle: crystal structure of a mfs transporter at 2.54 angstroem resolution
8c6h7dA_
100.0 14
PDB header:membrane protein
Chain: A: PDB Molecule:sugar transport protein 10;
PDBTitle: crystal structure of a. thaliana sugar transport protein 10 in complex2 with glucose in the outward occluded state
9c2gfpA_
100.0 14
PDB header:membrane protein
Chain: A: PDB Molecule:multidrug resistance protein d;
PDBTitle: structure of the multidrug transporter emrd from2 escherichia coli
10c4j05A_
100.0 12
PDB header:transport protein
Chain: A: PDB Molecule:phosphate transporter;
PDBTitle: crystal structure of a eukaryotic phosphate transporter
11c5aynA_
100.0 12
PDB header:transport protein
Chain: A: PDB Molecule:solute carrier family 39 (iron-regulated transporter);
PDBTitle: crystal structure of a bacterial homologue of iron transporter2 ferroportin in outward-facing state
12c4apsB_
100.0 9
PDB header:transport protein
Chain: B: PDB Molecule:di-or tripeptide h+ symporter;
PDBTitle: crystal structure of a pot family peptide transporter in an inward2 open conformation.
13c4ikyA_
100.0 14
PDB header:transport protein
Chain: A: PDB Molecule:di-tripeptide abc transporter (permease);
PDBTitle: crystal structure of peptide transporter pot (e310q mutant) in complex2 with sulfate
14c4ybqB_
100.0 14
PDB header:transport protein/immune system
Chain: B: PDB Molecule:solute carrier family 2, facilitated glucose transporter
PDBTitle: rat glut5 with fv in the outward-open form
15c5c65A_
100.0 14
PDB header:transport protein
Chain: A: PDB Molecule:solute carrier family 2, facilitated glucose transporter
PDBTitle: structure of the human glucose transporter glut3 / slc2a3
16c6exsA_
100.0 11
PDB header:membrane protein
Chain: A: PDB Molecule:peptide abc transporter permease;
PDBTitle: crystal structure of a pot family transporter in complex with2 thioalcohol conjugated peptide.
17d1pv7a_
100.0 12
Fold:MFS general substrate transporter
Superfamily:MFS general substrate transporter
Family:LacY-like proton/sugar symporter
18c4cl5B_
100.0 8
PDB header:transport protein
Chain: B: PDB Molecule:nitrate transporter 1.1;
PDBTitle: crystal structure of the nitrate transporter nrt1.1 from2 arabidopsis thaliana in complex with nitrate.
19c1pv7B_
100.0 12
PDB header:transport protein
Chain: B: PDB Molecule:lactose permease;
PDBTitle: crystal structure of lactose permease with tdg
20c5aymA_
100.0 13
PDB header:transport protein
Chain: A: PDB Molecule:solute carrier family 39 (iron-regulated transporter);
PDBTitle: crystal structure of a bacterial homologue of iron transporter2 ferroportin in outward-facing state with soaked iron
21c6gs7A_
not modelled 100.0 12
PDB header:membrane protein
Chain: A: PDB Molecule:dipeptide and tripeptide permease a;
PDBTitle: crystal structure of peptide transporter dtpa-nanobody in glycine2 buffer
22c4pypA_
not modelled 100.0 14
PDB header:transport protein
Chain: A: PDB Molecule:solute carrier family 2, facilitated glucose transporter
PDBTitle: crystal structure of the human glucose transporter glut1
23c6ei3A_
not modelled 100.0 13
PDB header:membrane protein
Chain: A: PDB Molecule:proton-dependent oligopeptide transporter family protein;
PDBTitle: crystal structure of auto inhibited pot family peptide transporter
24c4q65A_
not modelled 100.0 12
PDB header:transport protein
Chain: A: PDB Molecule:dipeptide permease d;
PDBTitle: structure of the e. coli peptide transporter ybgh
25c4w6vA_
not modelled 100.0 13
PDB header:transport protein
Chain: A: PDB Molecule:di-/tripeptide transporter;
PDBTitle: crystal structure of a peptide transporter from yersinia2 enterocolitica at 3 a resolution
26c4gbzA_
not modelled 100.0 15
PDB header:transport protein
Chain: A: PDB Molecule:d-xylose-proton symporter;
PDBTitle: the structure of the mfs (major facilitator superfamily) proton:xylose2 symporter xyle bound to d-glucose
27c2xutC_
not modelled 100.0 12
PDB header:transport protein
Chain: C: PDB Molecule:proton/peptide symporter family protein;
PDBTitle: crystal structure of a proton dependent oligopeptide (pot) family2 transporter.
28c4lepB_
not modelled 99.9 12
PDB header:membrane protein, tranport protein
Chain: B: PDB Molecule:proton:oligopeptide symporter pot family;
PDBTitle: structural insights into substrate recognition in proton dependent2 oligopeptide transporters
29c4iu9A_
not modelled 99.9 12
PDB header:transport protein
Chain: A: PDB Molecule:nitrite extrusion protein 2;
PDBTitle: crystal structure of a membrane transporter
30c4iu8A_
not modelled 99.9 12
PDB header:transport protein
Chain: A: PDB Molecule:nitrite extrusion protein 2;
PDBTitle: crystal structure of a membrane transporter (selenomethionine2 derivative)
31c4m64D_
not modelled 99.8 7
PDB header:transport protein
Chain: D: PDB Molecule:melibiose carrier protein;
PDBTitle: 3d crystal structure of na+/melibiose symporter of salmonella2 typhimurium
32c6ob7A_
not modelled 99.8 10
PDB header:transport protein
Chain: A: PDB Molecule:equilibrative nucleoside transporter 1;
PDBTitle: human equilibrative nucleoside transporter-1, dilazep bound
33c5bz3A_
not modelled 30.5 14
PDB header:transport protein
Chain: A: PDB Molecule:na(+)/h(+) antiporter;
PDBTitle: crystal structure of sodium proton antiporter napa in outward-facing2 conformation.
34c5gxwB_
not modelled 13.3 33
PDB header:protein binding
Chain: B: PDB Molecule:peptide from nuclear mitotic apparatus protein 1;
PDBTitle: importin and numa complex
35c4bwzA_
not modelled 13.1 12
PDB header:transport protein
Chain: A: PDB Molecule:na(+)/h(+) antiporter;
PDBTitle: crystal structure of the sodium proton antiporter, napa
36c2jmvA_
not modelled 12.2 21
PDB header:antiviral protein
Chain: A: PDB Molecule:scytovirin;
PDBTitle: solution structure of scytovirin refined against residual2 dipolar couplings
37c2g9pA_
not modelled 10.1 14
PDB header:antimicrobial protein
Chain: A: PDB Molecule:antimicrobial peptide latarcin 2a;
PDBTitle: nmr structure of a novel antimicrobial peptide, latarcin 2a,2 from spider (lachesana tarabaevi) venom
38d2eiaa2
not modelled 9.4 36
Fold:Retrovirus capsid protein, N-terminal core domain
Superfamily:Retrovirus capsid protein, N-terminal core domain
Family:Retrovirus capsid protein, N-terminal core domain
39c2kvtA_
not modelled 9.0 18
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein yaia;
PDBTitle: solution nmr structure of yaia from escherichia eoli. northeast2 structural genomics target er244
40c3ukwC_
not modelled 8.4 33
PDB header:protein transport/inhibitor
Chain: C: PDB Molecule:bimax1 peptide;
PDBTitle: mouse importin alpha: bimax1 peptide complex
41c3lfmA_
not modelled 8.1 32
PDB header:oxidoreductase
Chain: A: PDB Molecule:protein fto;
PDBTitle: crystal structure of the fat mass and obesity associated (fto) protein2 reveals basis for its substrate specificity
42c6cc4A_
not modelled 7.5 10
PDB header:transport protein
Chain: A: PDB Molecule:soluble cytochrome b562, lipid ii flippase murj chimera;
PDBTitle: structure of murj from escherichia coli
43c5sxpG_
not modelled 7.3 33
PDB header:signaling protein/ligase
Chain: G: PDB Molecule:e3 ubiquitin-protein ligase itchy homolog;
PDBTitle: structural basis for the interaction between itch prr and beta-pix
44c3vvpA_
not modelled 6.7 14
PDB header:transport protein
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of mate in complex with br-nrf
45c5kzoA_
not modelled 6.6 24
PDB header:transcription
Chain: A: PDB Molecule:neurogenic locus notch homolog protein 1;
PDBTitle: notch1 transmembrane and associated juxtamembrane segment
46c5v2sA_
not modelled 6.2 17
PDB header:viral protein
Chain: A: PDB Molecule:envelope glycoprotein b;
PDBTitle: crystal structure of glycoprotein b from herpes simplex virus type i
47c1rb8J_
not modelled 5.8 59
PDB header:virus/dna
Chain: J: PDB Molecule:small core protein;
PDBTitle: the phix174 dna binding protein j in two different capsid2 environments.

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Transmembrane helix prediction 

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