Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2217_(lipB)_2484592_2485284
DateMon Aug 5 13:25:34 BST 2019
Unique Job IDca31ebe45523bba2
SequenceVTGSIRSKLS ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:41.956 Y:47.980 Z:42.983
Model (left) based on template d1w66a1
Top template information
Fold:Class II aaRS and biotin synthetases
Superfamily:Class II aaRS and biotin synthetases
Family:LplA-like
Confidence and coverage
Confidence:100.0% Coverage: 94%
216 residues ( 94% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d1w66a1



100.0 99
Fold:Class II aaRS and biotin synthetases
Superfamily:Class II aaRS and biotin synthetases
Family:LplA-like
2c2qhvA_



100.0 43
PDB header:transferase
Chain: A: PDB Molecule:lipoyltransferase;
PDBTitle: structural basis of octanoic acid recognition by lipoate-protein2 ligase b
3c2qhsA_



100.0 43
PDB header:transferase
Chain: A: PDB Molecule:lipoyltransferase;
PDBTitle: structural basis of octanoic acid recognition by lipoate-protein2 ligase b
4c1vqzA_



100.0 21
PDB header:ligase
Chain: A: PDB Molecule:lipoate-protein ligase, putative;
PDBTitle: crystal structure of a putative lipoate-protein ligase a (sp_1160)2 from streptococcus pneumoniae tigr4 at 1.99 a resolution
5c3r07A_



100.0 16
PDB header:transferase
Chain: A: PDB Molecule:lipoate-protein ligase a subunit 1;
PDBTitle: structural analysis of an archaeal lipoylation system. a bi-partite2 lipoate protein ligase and its e2 lipoyl domain from thermoplasma3 acidophilum
6c1x2gB_



100.0 19
PDB header:ligase
Chain: B: PDB Molecule:lipoate-protein ligase a;
PDBTitle: crystal structure of lipate-protein ligase a from2 escherichia coli
7d2c8ma1



100.0 16
Fold:Class II aaRS and biotin synthetases
Superfamily:Class II aaRS and biotin synthetases
Family:LplA-like
8c2e5aA_



100.0 21
PDB header:ligase
Chain: A: PDB Molecule:lipoyltransferase 1;
PDBTitle: crystal structure of bovine lipoyltransferase in complex2 with lipoyl-amp
9d1vqza2



100.0 21
Fold:Class II aaRS and biotin synthetases
Superfamily:Class II aaRS and biotin synthetases
Family:LplA-like
10d1x2ga2



100.0 17
Fold:Class II aaRS and biotin synthetases
Superfamily:Class II aaRS and biotin synthetases
Family:LplA-like
11d2p5ia1



100.0 15
Fold:Class II aaRS and biotin synthetases
Superfamily:Class II aaRS and biotin synthetases
Family:LplA-like
12c5ij6A_



100.0 15
PDB header:ligase,transferase
Chain: A: PDB Molecule:lipoate--protein ligase;
PDBTitle: crystal structure of enterococcus faecalis lipoate-protein ligase a2 (lpla-1) in complex with lipoic acid
13c5ibyA_



100.0 18
PDB header:ligase,transferase
Chain: A: PDB Molecule:lipoate--protein ligase;
PDBTitle: crystal structure of enterococcus faecalis lipoate-protein ligase a2 (lpla-2) in complex with lipoic acid
14d2p0la1



100.0 14
Fold:Class II aaRS and biotin synthetases
Superfamily:Class II aaRS and biotin synthetases
Family:LplA-like
15c5t8uA_



100.0 15
PDB header:ligase
Chain: A: PDB Molecule:lipoate-protein ligase 1;
PDBTitle: crystal structure of p. falciparum lipl1 in complex lipoate
16d2zgwa2



99.0 14
Fold:Class II aaRS and biotin synthetases
Superfamily:Class II aaRS and biotin synthetases
Family:Biotin holoenzyme synthetase
17c2ej9A_



98.7 13
PDB header:ligase
Chain: A: PDB Molecule:putative biotin ligase;
PDBTitle: crystal structure of biotin protein ligase from2 methanococcus jannaschii
18c2eayB_



98.6 18
PDB header:ligase
Chain: B: PDB Molecule:biotin [acetyl-coa-carboxylase] ligase;
PDBTitle: crystal structure of biotin protein ligase from aquifex2 aeolicus
19c2ewnA_



98.6 21
PDB header:ligase, transcription
Chain: A: PDB Molecule:bira bifunctional protein;
PDBTitle: ecoli biotin repressor with co-repressor analog
20c3bfmA_



98.3 11
PDB header:unknown function
Chain: A: PDB Molecule:biotin protein ligase-like protein of unknown function;
PDBTitle: crystal structure of a biotin protein ligase-like protein of unknown2 function (tm1040_0394) from silicibacter sp. tm1040 at 1.70 a3 resolution
21c2dzcA_



not modelled 98.3 18
PDB header:ligase
Chain: A: PDB Molecule:biotin--[acetyl-coa-carboxylase] ligase;
PDBTitle: crystal structure of biotin protein ligase from pyrococcus2 horikoshii, mutation r48a
22c6ck0A_



not modelled 98.3 13
PDB header:ligase
Chain: A: PDB Molecule:biotin acetyl coenzyme a carboxylase synthetase;
PDBTitle: crystal structure of biotin acetyl coenzyme a carboxylase synthetase2 from helicobacter pylori with bound biotinylated atp
23c3rkxA_



not modelled 98.2 11
PDB header:ligase
Chain: A: PDB Molecule:biotin-[acetyl-coa-carboxylase] ligase;
PDBTitle: structural characterisation of staphylococcus aureus biotin protein2 ligase
24d1biaa3



not modelled 98.1 21
Fold:Class II aaRS and biotin synthetases
Superfamily:Class II aaRS and biotin synthetases
Family:Biotin holoenzyme synthetase
25c2cghB_



not modelled 98.0 17
PDB header:ligase
Chain: B: PDB Molecule:biotin ligase;
PDBTitle: crystal structure of biotin ligase from mycobacterium tuberculosis
26d2ddza1



not modelled 95.5 24
Fold:Class II aaRS and biotin synthetases
Superfamily:Class II aaRS and biotin synthetases
Family:PH0223-like
27d1b24a2



not modelled 31.7 29
Fold:Homing endonuclease-like
Superfamily:Homing endonucleases
Family:Group I mobile intron endonuclease
28c3lr4A_



not modelled 29.6 22
PDB header:transferase
Chain: A: PDB Molecule:sensor protein;
PDBTitle: periplasmic domain of the riss sensor protein from burkholderia2 pseudomallei, barium phased at low ph
29c1ponB_



not modelled 24.5 15
PDB header:calcium-binding protein
Chain: B: PDB Molecule:troponin c;
PDBTitle: site iii-site iv troponin c heterodimer, nmr
30c3fxtB_



not modelled 20.2 27
PDB header:gene regulation
Chain: B: PDB Molecule:nucleoside diphosphate-linked moiety x motif 6;
PDBTitle: crystal structure of the n-terminal domain of human nudt6
31c2xueB_



not modelled 15.6 22
PDB header:oxidoreductase
Chain: B: PDB Molecule:lysine-specific demethylase 6b;
PDBTitle: crystal structure of jmjd3
32c5x1eF_



not modelled 15.5 19
PDB header:protein transport
Chain: F: PDB Molecule:icmo (dotl);
PDBTitle: structure of dotl(656-783)-icms-icmw derived from legionella2 pneumophila
33c3avsA_



not modelled 14.0 22
PDB header:oxidoreductase
Chain: A: PDB Molecule:lysine-specific demethylase 6a;
PDBTitle: catalytic fragment of utx/kdm6a bound with n-oxyalylglycine, and2 ni(ii)
34c5yeeA_



not modelled 13.3 24
PDB header:structural protein
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of lokiprofilin1/rabbit actin complex
35c4ezhA_



not modelled 12.8 22
PDB header:oxidoreductase
Chain: A: PDB Molecule:lysine-specific demethylase 6b;
PDBTitle: the crystal structure of kdm6b bound with h3k27me3 peptide
36d3er7a1



not modelled 11.0 24
Fold:Cystatin-like
Superfamily:NTF2-like
Family:Exig0174-like
37d2bf5a1



not modelled 10.7 26
Fold:Monooxygenase (hydroxylase) regulatory protein
Superfamily:Monooxygenase (hydroxylase) regulatory protein
Family:Monooxygenase (hydroxylase) regulatory protein
38c5lxlA_



not modelled 10.4 21
PDB header:viral protein
Chain: A: PDB Molecule:decoration protein;
PDBTitle: nmr structure of the n-terminal domain of the bacteriophage t52 decoration protein pb10
39c2v9kA_



not modelled 10.2 19
PDB header:lyase
Chain: A: PDB Molecule:uncharacterized protein flj32312;
PDBTitle: crystal structure of human pus10, a novel pseudouridine2 synthase.
40d1hqia_



not modelled 8.6 21
Fold:Monooxygenase (hydroxylase) regulatory protein
Superfamily:Monooxygenase (hydroxylase) regulatory protein
Family:Monooxygenase (hydroxylase) regulatory protein
41d2bf2a1



not modelled 8.5 26
Fold:Monooxygenase (hydroxylase) regulatory protein
Superfamily:Monooxygenase (hydroxylase) regulatory protein
Family:Monooxygenase (hydroxylase) regulatory protein
42d1vyva2



not modelled 8.1 13
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Nucleotide and nucleoside kinases
43c4zbpC_



not modelled 7.6 24
PDB header:hydrolase
Chain: C: PDB Molecule:nudix hydrolase 7;
PDBTitle: crystal structure of the ampcpr-bound atnudt7
44d1vyua2



not modelled 7.5 13
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Nucleotide and nucleoside kinases
45c3uotB_



not modelled 7.2 16
PDB header:cell cycle
Chain: B: PDB Molecule:mediator of dna damage checkpoint protein 1;
PDBTitle: crystal structure of mdc1 fha domain in complex with a phosphorylated2 peptide from the mdc1 n-terminus
46c5dm3A_



not modelled 7.1 24
PDB header:ligase
Chain: A: PDB Molecule:l-glutamine synthetase;
PDBTitle: crystal structure of glutamine synthetase from chromohalobacter2 salexigens dsm 3043(csal_0679, target efi-550015) with bound adp
47d1uc8a1



not modelled 7.1 20
Fold:PreATP-grasp domain
Superfamily:PreATP-grasp domain
Family:Lysine biosynthesis enzyme LysX, N-terminal domain
48c6bi6A_



not modelled 7.0 14
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein yejg;
PDBTitle: solution nmr structure of uncharacterized protein yejg
49d1esfa1



not modelled 6.4 36
Fold:OB-fold
Superfamily:Bacterial enterotoxins
Family:Superantigen toxins, N-terminal domain
50c2jpeA_



not modelled 6.4 16
PDB header:transcription
Chain: A: PDB Molecule:nuclear inhibitor of protein phosphatase 1;
PDBTitle: fha domain of nipp1
51d1t3la2



not modelled 6.1 13
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Nucleotide and nucleoside kinases
52c2n84A_



not modelled 5.9 14
PDB header:isomerase
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: solution structure of the fha domain of tbpar42
53c2dchX_



not modelled 5.9 31
PDB header:hydrolase
Chain: X: PDB Molecule:putative homing endonuclease;
PDBTitle: crystal structure of archaeal intron-encoded homing endonuclease i-2 tsp061i
54c2mobA_



not modelled 5.8 24
PDB header:oxidoreductase
Chain: A: PDB Molecule:protein (methane monooxygenase regulatory
PDBTitle: methane monooxygenase component b
55d2moba_



not modelled 5.8 24
Fold:Monooxygenase (hydroxylase) regulatory protein
Superfamily:Monooxygenase (hydroxylase) regulatory protein
Family:Monooxygenase (hydroxylase) regulatory protein
56d1t0hb_



not modelled 5.6 13
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Nucleotide and nucleoside kinases

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