Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2220_(glnA1)_2487623_2489059
DateMon Aug 5 13:25:35 BST 2019
Unique Job IDf99ee6aeaa2693ae
SequenceVTEKTPDDVF ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:75.511 Y:61.019 Z:65.124
Model (left) based on template c1htoB_
Top template information
PDB header:ligase
Chain: B: PDB Molecule:glutamine synthetase;
PDBTitle: crystallographic structure of a relaxed glutamine synthetase from2 mycobacterium tuberculosis
Confidence and coverage
Confidence:100.0% Coverage:100%
477 residues (100% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

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#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c1htoB_



100.0 100
PDB header:ligase
Chain: B: PDB Molecule:glutamine synthetase;
PDBTitle: crystallographic structure of a relaxed glutamine synthetase from2 mycobacterium tuberculosis
2c1fpyE_



100.0 52
PDB header:ligase
Chain: E: PDB Molecule:glutamine synthetase;
PDBTitle: crystal structure of glutamine synthetase from salmonella2 typhimurium with inhibitor phosphinothricin
3c3ng0A_



100.0 58
PDB header:ligase
Chain: A: PDB Molecule:glutamine synthetase;
PDBTitle: crystal structure of glutamine synthetase from synechocystis sp. pcc2 6803
4c5zlpH_



100.0 45
PDB header:ligase
Chain: H: PDB Molecule:glutamine synthetase;
PDBTitle: crystal structure of glutamine synthetase from helicobacter pylori
5c4s17E_



100.0 61
PDB header:ligase
Chain: E: PDB Molecule:glutamine synthetase;
PDBTitle: the crystal structure of glutamine synthetase from bifidobacterium2 adolescentis atcc 15703
6c3qajL_



100.0 41
PDB header:ligase
Chain: L: PDB Molecule:glutamine synthetase;
PDBTitle: x-ray crystal structure of glutamine synthetase from bacillus subtilis2 cocrystallized with atp
7c2j9iL_



100.0 21
PDB header:ligase
Chain: L: PDB Molecule:glutamate-ammonia ligase domain-containing protein 1;
PDBTitle: lengsin is a survivor of an ancient family of class i glutamine2 synthetases in eukaryotes that has undergone evolutionary re-3 engineering for a tissue-specific role in the vertebrate eye lens.
8c4hppA_



100.0 28
PDB header:ligase
Chain: A: PDB Molecule:probable glutamine synthetase;
PDBTitle: crystal structure of novel glutamine synthase homolog
9c5dm3A_



100.0 30
PDB header:ligase
Chain: A: PDB Molecule:l-glutamine synthetase;
PDBTitle: crystal structure of glutamine synthetase from chromohalobacter2 salexigens dsm 3043(csal_0679, target efi-550015) with bound adp
10d2bvca2



100.0 100
Fold:Glutamine synthetase/guanido kinase
Superfamily:Glutamine synthetase/guanido kinase
Family:Glutamine synthetase catalytic domain
11d1f52a2



100.0 53
Fold:Glutamine synthetase/guanido kinase
Superfamily:Glutamine synthetase/guanido kinase
Family:Glutamine synthetase catalytic domain
12c2qc8J_



100.0 23
PDB header:ligase
Chain: J: PDB Molecule:glutamine synthetase;
PDBTitle: crystal structure of human glutamine synthetase in complex with adp2 and methionine sulfoximine phosphate
13c4baxH_



100.0 21
PDB header:ligase
Chain: H: PDB Molecule:glutamine synthetase;
PDBTitle: crystal structure of glutamine synthetase from streptomyces2 coelicolor
14c2d3aJ_



100.0 21
PDB header:ligase
Chain: J: PDB Molecule:glutamine synthetase;
PDBTitle: crystal structure of the maize glutamine synthetase2 complexed with adp and methionine sulfoximine phosphate
15c3fkyD_



100.0 24
PDB header:ligase
Chain: D: PDB Molecule:glutamine synthetase;
PDBTitle: crystal structure of the glutamine synthetase gln1deltan182 from the yeast saccharomyces cerevisiae
16c3o6xC_



100.0 22
PDB header:ligase
Chain: C: PDB Molecule:glutamine synthetase;
PDBTitle: crystal structure of the type iii glutamine synthetase from2 bacteroides fragilis
17c4is4G_



100.0 26
PDB header:ligase
Chain: G: PDB Molecule:glutamine synthetase;
PDBTitle: the glutamine synthetase from the dicotyledonous plant m. truncatula2 is a decamer
18d2bvca1



99.9 100
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Glutamine synthetase, N-terminal domain
Family:Glutamine synthetase, N-terminal domain
19d1f52a1



99.9 45
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Glutamine synthetase, N-terminal domain
Family:Glutamine synthetase, N-terminal domain
20c1tt4B_



99.1 17
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:putative cytoplasmic protein;
PDBTitle: structure of np459575, a predicted glutathione synthase from2 salmonella typhimurium
21d1tt4a_



not modelled 99.1 20
Fold:Glutamine synthetase/guanido kinase
Superfamily:Glutamine synthetase/guanido kinase
Family:Glutamate-cysteine ligase family 2 (GCS2)
22d1r8ga_



not modelled 98.9 19
Fold:Glutamine synthetase/guanido kinase
Superfamily:Glutamine synthetase/guanido kinase
Family:Glutamate-cysteine ligase family 2 (GCS2)
23c2gwcE_



not modelled 98.0 17
PDB header:ligase
Chain: E: PDB Molecule:glutamate cysteine ligase;
PDBTitle: crystal structure of plant glutamate cysteine ligase in complex with a2 transition state analogue
24d1u8sa2



not modelled 41.8 8
Fold:Ferredoxin-like
Superfamily:ACT-like
Family:Glycine cleavage system transcriptional repressor
25c2qw5B_



not modelled 41.0 19
PDB header:isomerase
Chain: B: PDB Molecule:xylose isomerase-like tim barrel;
PDBTitle: crystal structure of a putative sugar phosphate isomerase/epimerase2 (ava4194) from anabaena variabilis atcc 29413 at 1.78 a resolution
26c2dr1A_



not modelled 34.8 21
PDB header:transferase
Chain: A: PDB Molecule:386aa long hypothetical serine aminotransferase;
PDBTitle: crystal structure of the ph1308 protein from pyrococcus horikoshii ot3
27c3it5B_



not modelled 29.5 32
PDB header:hydrolase
Chain: B: PDB Molecule:protease lasa;
PDBTitle: crystal structure of the lasa virulence factor from pseudomonas2 aeruginosa
28c2p6yA_



not modelled 28.9 13
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein vca0587;
PDBTitle: x-ray structure of the protein q9km02_vibch from vibrio cholerae at2 the resolution 1.63 a. northeast structural genomics consortium3 target vcr80.
29c3ke2A_



not modelled 28.7 26
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein yp_928783.1;
PDBTitle: crystal structure of a duf2131 family protein (sama_2911) from2 shewanella amazonensis sb2b at 2.50 a resolution
30c5op0B_



not modelled 22.2 10
PDB header:transferase
Chain: B: PDB Molecule:dna polymerase ligd, polymerase domain;
PDBTitle: structure of prim-polc from mycobacterium smegmatis
31c1a8pA_



not modelled 22.2 20
PDB header:oxidoreductase
Chain: A: PDB Molecule:nadph\:ferredoxin oxidoreductase;
PDBTitle: ferredoxin reductase from azotobacter vinelandii
32d2z1ea1



not modelled 20.2 11
Fold:Bacillus chorismate mutase-like
Superfamily:PurM N-terminal domain-like
Family:PurM N-terminal domain-like
33d1vkia_



not modelled 19.3 13
Fold:YbaK/ProRS associated domain
Superfamily:YbaK/ProRS associated domain
Family:YbaK/ProRS associated domain
34c3bzjA_



not modelled 19.1 10
PDB header:hydrolase
Chain: A: PDB Molecule:uv endonuclease;
PDBTitle: uvde k229l
35c3hwuA_



not modelled 19.0 9
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative dna-binding protein;
PDBTitle: crystal structure of putative dna-binding protein (yp_299413.1) from2 ralstonia eutropha jmp134 at 1.30 a resolution
36c2jy5A_



not modelled 17.6 17
PDB header:signaling protein
Chain: A: PDB Molecule:ubiquilin-1;
PDBTitle: nmr structure of ubiquilin 1 uba domain
37c4bt7A_



not modelled 17.5 28
PDB header:lyase
Chain: A: PDB Molecule:alpha-acetolactate decarboxylase;
PDBTitle: acetolactate decarboxylase with a bound phosphate ion
38d1z2la2



not modelled 17.1 8
Fold:Ferredoxin-like
Superfamily:Bacterial exopeptidase dimerisation domain
Family:Bacterial exopeptidase dimerisation domain
39c3htnA_



not modelled 16.5 12
PDB header:metal binding protein
Chain: A: PDB Molecule:putative dna binding protein;
PDBTitle: crystal structure of a putative dna binding protein (bt_1116) from2 bacteroides thetaiotaomicron vpi-5482 at 1.50 a resolution
40c2gu1A_



not modelled 16.0 25
PDB header:hydrolase
Chain: A: PDB Molecule:zinc peptidase;
PDBTitle: crystal structure of a zinc containing peptidase from2 vibrio cholerae
41c5knwA_



not modelled 15.7 18
PDB header:rna binding protein
Chain: A: PDB Molecule:la-related protein 7;
PDBTitle: solution nmr structure of human larp7 xrrm2
42c3ln7A_



not modelled 15.5 18
PDB header:ligase
Chain: A: PDB Molecule:glutathione biosynthesis bifunctional protein gshab;
PDBTitle: crystal structure of a bifunctional glutathione synthetase from2 pasteurella multocida
43c1u8sB_



not modelled 15.3 3
PDB header:transcription
Chain: B: PDB Molecule:glycine cleavage system transcriptional
PDBTitle: crystal structure of putative glycine cleavage system2 transcriptional repressor
44c1y1oC_



not modelled 15.3 13
PDB header:recombination
Chain: C: PDB Molecule:penicillin-binding protein-related factor a;
PDBTitle: x-ray crystal structure of penicillin-binding protein-2 related factor a from bacillus stearothermophilus
45d1y1oa_



not modelled 15.3 13
Fold:Restriction endonuclease-like
Superfamily:Restriction endonuclease-like
Family:RecU-like
46d2fhqa1



not modelled 14.7 18
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
47d1owxa_



not modelled 14.7 15
Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
48d1ysja2



not modelled 14.5 9
Fold:Ferredoxin-like
Superfamily:Bacterial exopeptidase dimerisation domain
Family:Bacterial exopeptidase dimerisation domain
49c3tc3B_



not modelled 14.3 9
PDB header:hydrolase
Chain: B: PDB Molecule:uv damage endonuclease;
PDBTitle: crystal structure of sacuvde
50c5yhkB_



not modelled 14.3 33
PDB header:metal binding protein
Chain: B: PDB Molecule:alpha-acetolactate decarboxylase;
PDBTitle: crystal structure of acetolactate decarboxylase from enterbacter2 aerogenes
51c3ln6A_



not modelled 14.2 16
PDB header:ligase
Chain: A: PDB Molecule:glutathione biosynthesis bifunctional protein gshab;
PDBTitle: crystal structure of a bifunctional glutathione synthetase from2 streptococcus agalactiae
52c3uz0D_



not modelled 13.8 39
PDB header:transport protein
Chain: D: PDB Molecule:stage ii sporulation protein q;
PDBTitle: crystal structure of spoiiiah and spoiiq complex
53c2igoG_



not modelled 13.7 18
PDB header:oxidoreductase
Chain: G: PDB Molecule:pyranose oxidase;
PDBTitle: crystal structure of pyranose 2-oxidase h167a mutant with 2-fluoro-2-2 deoxy-d-glucose
54d1u8sa1



not modelled 13.6 5
Fold:Ferredoxin-like
Superfamily:ACT-like
Family:Glycine cleavage system transcriptional repressor
55d1zpva1



not modelled 13.6 7
Fold:Ferredoxin-like
Superfamily:ACT-like
Family:SP0238-like
56c5j1lA_



not modelled 12.7 25
PDB header:hydrolase
Chain: A: PDB Molecule:toxr-activated gene (tage);
PDBTitle: crystal structure of csd1-csd2 dimer i
57d1xv2a_



not modelled 12.6 33
Fold:AF0104/ALDC/Ptd012-like
Superfamily:AF0104/ALDC/Ptd012-like
Family:Alpha-acetolactate decarboxylase-like
58d1jqoa_



not modelled 12.2 18
Fold:TIM beta/alpha-barrel
Superfamily:Phosphoenolpyruvate/pyruvate domain
Family:Phosphoenolpyruvate carboxylase
59c1jqoA_



not modelled 12.2 18
PDB header:lyase
Chain: A: PDB Molecule:phosphoenolpyruvate carboxylase;
PDBTitle: crystal structure of c4-form phosphoenolpyruvate carboxylase from2 maize
60c5kqbA_



not modelled 11.7 32
PDB header:hydrolase
Chain: A: PDB Molecule:peptidase m23;
PDBTitle: identification and structural characterization of lytu
61d1a8pa2



not modelled 11.4 20
Fold:Ferredoxin reductase-like, C-terminal NADP-linked domain
Superfamily:Ferredoxin reductase-like, C-terminal NADP-linked domain
Family:Reductases
62c2hsiB_



not modelled 11.3 25
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:putative peptidase m23;
PDBTitle: crystal structure of putative peptidase m23 from2 pseudomonas aeruginosa, new york structural genomics3 consortium
63c3p2oB_



not modelled 11.2 19
PDB header:oxidoreductase, hydrolase
Chain: B: PDB Molecule:bifunctional protein fold;
PDBTitle: crystal structure of fold bifunctional protein from campylobacter2 jejuni
64c3tufB_



not modelled 11.0 44
PDB header:signaling protein
Chain: B: PDB Molecule:stage ii sporulation protein q;
PDBTitle: structure of the spoiiq-spoiiiah pore forming complex.
65c5yhoA_



not modelled 10.8 33
PDB header:metal binding protein
Chain: A: PDB Molecule:alpha-acetolactate decarboxylase;
PDBTitle: crystal structure of acetolactate decarboxylase from enterobacter2 cloacae
66c5xneA_



not modelled 10.3 33
PDB header:lyase
Chain: A: PDB Molecule:alpha-acetolactate decarboxylase;
PDBTitle: x-ray crystal structure of alpha-acetolactate decarboxylase from2 bacillus subtilis strain 168
67c3qm2A_



not modelled 10.2 17
PDB header:transferase
Chain: A: PDB Molecule:phosphoserine aminotransferase;
PDBTitle: 2.25 angstrom crystal structure of phosphoserine aminotransferase2 (serc) from salmonella enterica subsp. enterica serovar typhimurium
68d2c0ra1



not modelled 10.2 17
Fold:PLP-dependent transferase-like
Superfamily:PLP-dependent transferases
Family:GABA-aminotransferase-like
69c4pmuD_



not modelled 10.2 8
PDB header:hydrolase
Chain: D: PDB Molecule:endo-1,4-beta-xylanase a;
PDBTitle: crystal structure of a novel reducing-end xylose-releasing exo-2 oligoxylanase (xyna) belonging to gh10 family (space group p1211)
70c3ixzB_



not modelled 9.9 21
PDB header:hydrolase
Chain: B: PDB Molecule:potassium-transporting atpase subunit beta;
PDBTitle: pig gastric h+/k+-atpase complexed with aluminium fluoride
71c6ithA_



not modelled 9.4 23
PDB header:membrane protein
Chain: A: PDB Molecule:syndecan-2;
PDBTitle: structure of the transmembrane domain of syndecan 2 in micelles
72c5mwwA_



not modelled 9.4 20
PDB header:transferase
Chain: A: PDB Molecule:rna polymerase sigma factor siga;
PDBTitle: sigma1.1 domain of sigmaa from bacillus subtilis
73c2z2vA_



not modelled 9.2 18
PDB header:oxidoreductase
Chain: A: PDB Molecule:hypothetical protein ph1688;
PDBTitle: crystal structure of l-lysine dehydrogenase from2 hyperthermophilic archaeon pyrococcus horikoshii
74c2dt4A_



not modelled 9.1 15
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein ph0802;
PDBTitle: crystal structure of pyrococcus horikoshii a plant- and prokaryote-2 conserved (ppc) protein at 1.60 resolution
75c5w7gV_



not modelled 9.0 21
PDB header:virus
Chain: V: PDB Molecule:orf132;
PDBTitle: an envelope of a filamentous hyperthermophilic virus carries lipids in2 a horseshoe conformation
76d1a4ia2



not modelled 8.7 16
Fold:Aminoacid dehydrogenase-like, N-terminal domain
Superfamily:Aminoacid dehydrogenase-like, N-terminal domain
Family:Tetrahydrofolate dehydrogenase/cyclohydrolase
77c5iwyD_



not modelled 8.6 8
PDB header:lyase
Chain: D: PDB Molecule:2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase;
PDBTitle: crystal structure of 2-c-methyl-d-erythritol 2,4-cyclodiphosphate2 synthase from bacillus subtitis complexed with cmp and mg2+
78c5u4nA_



not modelled 8.6 17
PDB header:lyase
Chain: A: PDB Molecule:fructose-1;
PDBTitle: crystal structure of a fructose-bisphosphate aldolase from neisseria2 gonorrhoeae
79d1jjcb2



not modelled 8.3 20
Fold:Putative DNA-binding domain
Superfamily:Putative DNA-binding domain
Family:Domains B1 and B5 of PheRS-beta, PheT
80d1bjna_



not modelled 8.3 17
Fold:PLP-dependent transferase-like
Superfamily:PLP-dependent transferases
Family:GABA-aminotransferase-like
81c2btwA_



not modelled 8.2 17
PDB header:transferase
Chain: A: PDB Molecule:alr0975 protein;
PDBTitle: crystal structure of alr0975
82c2jepB_



not modelled 8.0 13
PDB header:hydrolase
Chain: B: PDB Molecule:xyloglucanase;
PDBTitle: native family 5 xyloglucanase from paenibacillus pabuli
83c4bh5B_



not modelled 7.9 6
PDB header:cell cycle
Chain: B: PDB Molecule:murein hydrolase activator envc;
PDBTitle: lytm domain of envc, an activator of cell wall amidases in2 escherichia coli
84c4owtB_



not modelled 7.8 24
PDB header:dna binding protein
Chain: B: PDB Molecule:soss complex subunit b1;
PDBTitle: structural basis of soss1 complex assembly
85d1rvga_



not modelled 7.8 10
Fold:TIM beta/alpha-barrel
Superfamily:Aldolase
Family:Class II FBP aldolase
86d2cyga1



not modelled 7.7 21
Fold:TIM beta/alpha-barrel
Superfamily:(Trans)glycosidases
Family:beta-glycanases
87c2k6xA_



not modelled 7.5 18
PDB header:transcription
Chain: A: PDB Molecule:rna polymerase sigma factor rpod;
PDBTitle: autoregulation of a group 1 bacterial sigma factor involves2 the formation of a region 1.1- induced compacted structure
88c3p2oA_



not modelled 7.4 19
PDB header:oxidoreductase, hydrolase
Chain: A: PDB Molecule:bifunctional protein fold;
PDBTitle: crystal structure of fold bifunctional protein from campylobacter2 jejuni
89d2ch1a1



not modelled 7.3 14
Fold:PLP-dependent transferase-like
Superfamily:PLP-dependent transferases
Family:Cystathionine synthase-like
90c2nyiB_



not modelled 7.3 8
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:unknown protein;
PDBTitle: crystal structure of an unknown protein from galdieria sulphuraria
91c3tndF_



not modelled 7.2 47
PDB header:translation, toxin
Chain: F: PDB Molecule:antitoxin vapb;
PDBTitle: crystal structure of shigella flexneri vapbc toxin-antitoxin complex
92c2iyfA_



not modelled 7.2 14
PDB header:transferase
Chain: A: PDB Molecule:oleandomycin glycosyltransferase;
PDBTitle: the crystal structure of macrolide glycosyltransferases: a2 blueprint for antibiotic engineering
93c5j1mD_



not modelled 7.1 25
PDB header:hydrolase
Chain: D: PDB Molecule:toxr-activated gene (tage);
PDBTitle: crystal structure of csd1-csd2 dimer ii
94c2wbrA_



not modelled 7.0 25
PDB header:dna-binding protein
Chain: A: PDB Molecule:gw182;
PDBTitle: the rrm domain in gw182 proteins contributes to mirna-2 mediated gene silencing
95c2fyfB_



not modelled 6.8 8
PDB header:transferase
Chain: B: PDB Molecule:phosphoserine aminotransferase;
PDBTitle: structure of a putative phosphoserine aminotransferase from2 mycobacterium tuberculosis
96c3sluB_



not modelled 6.7 31
PDB header:hydrolase
Chain: B: PDB Molecule:m23 peptidase domain protein;
PDBTitle: crystal structure of nmb0315
97c3b8eB_



not modelled 6.7 13
PDB header:hydrolase/transport protein
Chain: B: PDB Molecule:sodium/potassium-transporting atpase subunit
PDBTitle: crystal structure of the sodium-potassium pump
98d1aq0a_



not modelled 6.6 11
Fold:TIM beta/alpha-barrel
Superfamily:(Trans)glycosidases
Family:beta-glycanases
99c2f59B_



not modelled 6.6 27
PDB header:transferase
Chain: B: PDB Molecule:6,7-dimethyl-8-ribityllumazine synthase 1;
PDBTitle: lumazine synthase ribh1 from brucella abortus (gene bruab1_0785,2 swiss-prot entry q57dy1) complexed with inhibitor 5-nitro-6-(d-3 ribitylamino)-2,4(1h,3h) pyrimidinedione

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