Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2231B_(RVBD2231B)_2506215_2506391
DateMon Aug 5 13:25:36 BST 2019
Unique Job ID8915102f1ef591af
SequenceLALWYQAMIA ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:23.446 Y:23.027 Z:18.680
Model (left) based on template d2odka1
Top template information
Fold:YefM-like
Superfamily:YefM-like
Family:YefM-like
Confidence and coverage
Confidence: 70.5% Coverage: 40%
23 residues ( 40% of your sequence) have been modelled with 70.5% confidence by the single highest scoring template.
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3D viewing
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d2odka1



70.5 30
Fold:YefM-like
Superfamily:YefM-like
Family:YefM-like
2c2odkD_



62.2 33
PDB header:structural genomics, unknown function
Chain: D: PDB Molecule:hypothetical protein;
PDBTitle: putative prevent-host-death protein from nitrosomonas europaea
3c3hryA_



23.9 28
PDB header:antitoxin
Chain: A: PDB Molecule:prevent host death protein;
PDBTitle: crystal structure of phd in a trigonal space group and partially2 disordered
4c2mkxA_



17.6 26
PDB header:hydrolase
Chain: A: PDB Molecule:autolysin;
PDBTitle: solution structure of lysm the peptidoglycan binding domain of2 autolysin atla from enterococcus faecalis
5c3hs2H_



11.5 30
PDB header:antitoxin
Chain: H: PDB Molecule:prevent host death protein;
PDBTitle: crystal structure of phd truncated to residue 57 in an orthorhombic2 space group
6c2lxeA_



10.6 26
PDB header:transferase
Chain: A: PDB Molecule:histone-lysine n-methyltransferase suvr4;
PDBTitle: s4wyild
7c4xruE_



8.3 23
PDB header:protein binding
Chain: E: PDB Molecule:rnl;
PDBTitle: structure of pnkp1/rnl/hen1 complex
8c5twaC_



7.9 63
PDB header:apoptosis
Chain: C: PDB Molecule:bak-2 protein;
PDBTitle: crystal structure of geodia cydonium bhp2 in complex with lubomirskia2 baicalensis bak-2
9c5twaD_



7.9 63
PDB header:apoptosis
Chain: D: PDB Molecule:bak-2 protein;
PDBTitle: crystal structure of geodia cydonium bhp2 in complex with lubomirskia2 baicalensis bak-2
10c4wfwA_



7.4 17
PDB header:structural protein
Chain: A: PDB Molecule:general secretion pathway protein b;
PDBTitle: the crystal structure of dickeya dadantii gspb from the type 22 secretion system
11c5an5J_



7.0 46
PDB header:cell cycle
Chain: J: PDB Molecule:cell cycle protein gpsb;
PDBTitle: b. subtilis gpsb c-terminal domain
12d1auya_



6.4 57
Fold:Nucleoplasmin-like/VP (viral coat and capsid proteins)
Superfamily:Positive stranded ssRNA viruses
Family:Tymoviridae-like VP
13d1auyb_



6.2 57
Fold:Nucleoplasmin-like/VP (viral coat and capsid proteins)
Superfamily:Positive stranded ssRNA viruses
Family:Tymoviridae-like VP
14c2l9yA_



6.2 28
PDB header:sugar binding protein
Chain: A: PDB Molecule:cvnh-lysm lectin;
PDBTitle: solution structure of the mocvnh-lysm module from the rice blast2 fungus magnaporthe oryzae protein (mgg_03307)
15d1ddla_



5.6 43
Fold:Nucleoplasmin-like/VP (viral coat and capsid proteins)
Superfamily:Positive stranded ssRNA viruses
Family:Tymoviridae-like VP

Binding site prediction 

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