Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2235_(-)_2507645_2508460
DateMon Aug 5 13:25:36 BST 2019
Unique Job ID8648ff69cefbe0fa
SequenceMPRLAFLLRP ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:16.410 Y:17.792 Z:30.930
Model (left) based on template c2mc7A_
Top template information
PDB header:membrane protein
Chain: A: PDB Molecule:regulatory peptide;
PDBTitle: structure of salmonella mgtr
Confidence and coverage
Confidence: 50.8% Coverage: 8%
21 residues ( 8% of your sequence) have been modelled with 50.8% confidence by the single highest scoring template.
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3D viewing
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c2mc7A_



50.8 33
PDB header:membrane protein
Chain: A: PDB Molecule:regulatory peptide;
PDBTitle: structure of salmonella mgtr
2c1zzaA_



33.4 12
PDB header:membrane protein
Chain: A: PDB Molecule:stannin;
PDBTitle: solution nmr structure of the membrane protein stannin
3c5n9yB_



29.2 14
PDB header:membrane protein
Chain: B: PDB Molecule:zinc transport protein zntb;
PDBTitle: the full-length structure of zntb
4c2lx0A_



28.6 14
PDB header:membrane protein
Chain: A: PDB Molecule:membrane fusion protein p14;
PDBTitle: arced helix (arch) nmr structure of the reovirus p14 fusion-associated2 small transmembrane (fast) protein transmembrane domain (tmd) in3 dodecyl phosphocholine (dpc) micelles
5c3tqzA_



28.0 17
PDB header:hydrolase
Chain: A: PDB Molecule:deoxyuridine 5'-triphosphate nucleotidohydrolase;
PDBTitle: structure of a deoxyuridine 5'-triphosphate nucleotidohydrolase (dut)2 from coxiella burnetii
6c6gcsW_



26.3 12
PDB header:oxidoreductase
Chain: W: PDB Molecule:nb6m subunit;
PDBTitle: cryo-em structure of respiratory complex i from yarrowia lipolytica
7d1sixa_



26.1 22
Fold:beta-clip
Superfamily:dUTPase-like
Family:dUTPase-like
8c2i5nH_



25.0 12
PDB header:photosynthesis
Chain: H: PDB Molecule:reaction center protein h chain;
PDBTitle: 1.96 a x-ray structure of photosynthetic reaction center from2 rhodopseudomonas viridis:crystals grown by microfluidic technique
9c2bbjB_



23.4 24
PDB header:metal transport/membrane protein
Chain: B: PDB Molecule:divalent cation transport-related protein;
PDBTitle: crystal structure of the cora mg2+ transporter
10c3ca9A_



20.2 19
PDB header:hydrolase
Chain: A: PDB Molecule:deoxyuridine triphosphatase;
PDBTitle: evolution of chlorella virus dutpase
11d2r6ia1



18.3 15
Fold:ATP12-like
Superfamily:ATP12-like
Family:ATP12-like
12c5lnkq_



18.2 17
PDB header:oxidoreductase
Chain: Q: PDB Molecule:
PDBTitle: entire ovine respiratory complex i
13c5o31Z_



16.7 17
PDB header:oxidoreductase
Chain: Z: PDB Molecule:nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit
PDBTitle: mitochondrial complex i in the deactive state
14c6rdr8_



16.4 21
PDB header:proton transport
Chain: 8: PDB Molecule:mitochondrial atp synthase subunit asa8;
PDBTitle: cryo-em structure of polytomella f-atp synthase, rotary substate 1d,2 monomer-masked refinement
15c6rdi8_



16.4 21
PDB header:proton transport
Chain: 8: PDB Molecule:mitochondrial atp synthase subunit asa8;
PDBTitle: cryo-em structure of polytomella f-atp synthase, rotary substate 1a,2 monomer-masked refinement
16d1thqa_



15.4 33
Fold:Transmembrane beta-barrels
Superfamily:OMPA-like
Family:Outer membrane enzyme PagP
17c6maiA_



15.3 19
PDB header:hydrolase
Chain: A: PDB Molecule:deoxyuridine 5'-triphosphate nucleotidohydrolase;
PDBTitle: crystal structure of deoxyuridine 5'-triphosphate nucleotidohydrolase2 from legionella pneumophila philadelphia 1
18c6mplA_



14.4 35
PDB header:membrane protein
Chain: A: PDB Molecule:matrix protein 2;
PDBTitle: racemic m2-tm i39a crystallized from racemic detergent
19c2na6A_



14.2 26
PDB header:apoptosis
Chain: A: PDB Molecule:tumor necrosis factor receptor superfamily member 6;
PDBTitle: transmembrane domain of mouse fas/cd95 death receptor
20c2na6B_



14.2 26
PDB header:apoptosis
Chain: B: PDB Molecule:tumor necrosis factor receptor superfamily member 6;
PDBTitle: transmembrane domain of mouse fas/cd95 death receptor
21c2na6C_



not modelled 14.2 26
PDB header:apoptosis
Chain: C: PDB Molecule:tumor necrosis factor receptor superfamily member 6;
PDBTitle: transmembrane domain of mouse fas/cd95 death receptor
22c4xtnJ_



not modelled 14.1 6
PDB header:membrane protein
Chain: J: PDB Molecule:sodium pumping rhodopsin;
PDBTitle: crystal structure of the light-driven sodium pump kr2 in the2 pentameric red form, ph 4.9
23d1xmeb2



not modelled 13.1 18
Fold:Transmembrane helix hairpin
Superfamily:Cytochrome c oxidase subunit II-like, transmembrane region
Family:Cytochrome c oxidase subunit II-like, transmembrane region
24c6roiC_



not modelled 12.8 17
PDB header:lipid transport
Chain: C: PDB Molecule:cell division control protein 50;
PDBTitle: cryo-em structure of the partially activated drs2p-cdc50p
25c3so2A_



not modelled 12.7 17
PDB header:hydrolase
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: chlorella dutpase
26c2voyE_



not modelled 12.7 18
PDB header:hydrolase
Chain: E: PDB Molecule:sarcoplasmic/endoplasmic reticulum calcium atpase 1;
PDBTitle: cryoem model of copa, the copper transporting atpase from2 archaeoglobus fulgidus
27c2p9oB_



not modelled 12.4 8
PDB header:hydrolase
Chain: B: PDB Molecule:dutp pyrophosphatase-like protein;
PDBTitle: structure of dutpase from arabidopsis thaliana
28d2vvpa1



not modelled 12.0 17
Fold:Ribose/Galactose isomerase RpiB/AlsB
Superfamily:Ribose/Galactose isomerase RpiB/AlsB
Family:Ribose/Galactose isomerase RpiB/AlsB
29c3ddlB_



not modelled 11.6 15
PDB header:transport protein
Chain: B: PDB Molecule:xanthorhodopsin;
PDBTitle: crystallographic structure of xanthorhodopsin, a light-driven ion pump2 with dual chromophore
30d1sjna_



not modelled 11.2 22
Fold:beta-clip
Superfamily:dUTPase-like
Family:dUTPase-like
31c5xywD_



not modelled 9.9 67
PDB header:protein binding
Chain: D: PDB Molecule:gd21652;
PDBTitle: crystal structure of drosophila simulans rhino chromoshadow domain in2 complex with n-terminal domain
32c4ev6E_



not modelled 9.8 7
PDB header:metal transport
Chain: E: PDB Molecule:magnesium transport protein cora;
PDBTitle: the complete structure of cora magnesium transporter from2 methanocaldococcus jannaschii
33d2iuba2



not modelled 9.7 25
Fold:Transmembrane helix hairpin
Superfamily:Magnesium transport protein CorA, transmembrane region
Family:Magnesium transport protein CorA, transmembrane region
34c3h6xA_



not modelled 9.7 19
PDB header:hydrolase
Chain: A: PDB Molecule:dutpase;
PDBTitle: crystal structure of dutpase from streptococcus mutans
35c2kncA_



not modelled 9.5 38
PDB header:cell adhesion
Chain: A: PDB Molecule:integrin alpha-iib;
PDBTitle: platelet integrin alfaiib-beta3 transmembrane-cytoplasmic2 heterocomplex
36c3c3iA_



not modelled 9.5 19
PDB header:hydrolase
Chain: A: PDB Molecule:deoxyuridine triphosphatase;
PDBTitle: evolution of chlorella virus dutpase
37c6elhA_



not modelled 9.4 13
PDB header:oxidoreductase
Chain: A: PDB Molecule:nitric-oxide reductase;
PDBTitle: low resolution structure of neisseria meningitidis qnor
38c6mpnB_



not modelled 9.4 30
PDB header:membrane protein
Chain: B: PDB Molecule:matrix protein 2;
PDBTitle: racemic m2-tm i42e crystallized from racemic detergent
39c6mpnA_



not modelled 9.4 30
PDB header:membrane protein
Chain: A: PDB Molecule:matrix protein 2;
PDBTitle: racemic m2-tm i42e crystallized from racemic detergent
40c5kk2E_



not modelled 9.1 21
PDB header:membrane protein, transport protein, sig
Chain: E: PDB Molecule:voltage-dependent calcium channel gamma-2 subunit;
PDBTitle: architecture of fully occupied glua2 ampa receptor - tarp complex2 elucidated by single particle cryo-electron microscopy
41c3krbB_



not modelled 9.0 13
PDB header:oxidoreductase
Chain: B: PDB Molecule:aldose reductase;
PDBTitle: structure of aldose reductase from giardia lamblia at 1.75a resolution
42c6adqP_



not modelled 9.0 20
PDB header:electron transport
Chain: P: PDB Molecule:prokaryotic respiratory supercomplex associate factor 1
PDBTitle: respiratory complex ciii2civ2sod2 from mycobacterium smegmatis
43c2axtc_



not modelled 8.7 14
PDB header:electron transport
Chain: C: PDB Molecule:photosystem ii cp43 protein;
PDBTitle: crystal structure of photosystem ii from thermosynechococcus elongatus
44d2axtc1



not modelled 8.7 14
Fold:Photosystem II antenna protein-like
Superfamily:Photosystem II antenna protein-like
Family:Photosystem II antenna protein-like
45d1ehkb2



not modelled 8.6 18
Fold:Transmembrane helix hairpin
Superfamily:Cytochrome c oxidase subunit II-like, transmembrane region
Family:Cytochrome c oxidase subunit II-like, transmembrane region
46c3sokB_



not modelled 8.3 11
PDB header:cell adhesion
Chain: B: PDB Molecule:fimbrial protein;
PDBTitle: dichelobacter nodosus pilin fima
47c4g0hA_



not modelled 7.9 20
PDB header:toxin
Chain: A: PDB Molecule:cytotoxicity-associated immunodominant antigen;
PDBTitle: crystal structure of the n-terminal domain of helicobacter pylori caga2 protein
48d1vmha_



not modelled 7.0 60
Fold:YjbQ-like
Superfamily:YjbQ-like
Family:YjbQ-like
49d1vpha_



not modelled 7.0 40
Fold:YjbQ-like
Superfamily:YjbQ-like
Family:YjbQ-like
50c5xyvC_



not modelled 7.0 50
PDB header:protein binding
Chain: C: PDB Molecule:protein deadlock;
PDBTitle: crystal structure of drosophila melanogaster rhino chromoshadow domain2 in complex with deadlock n-terminal domain
51d1vmfa_



not modelled 6.9 60
Fold:YjbQ-like
Superfamily:YjbQ-like
Family:YjbQ-like
52c3lqwA_



not modelled 6.8 14
PDB header:hydrolase
Chain: A: PDB Molecule:deoxyuridine 5'-triphosphate nucleotidohydrolase;
PDBTitle: crystal structure of deoxyuridine 5-triphosphate2 nucleotidohydrolase from entamoeba histolytica
53c1fooA_



not modelled 6.8 17
PDB header:oxidoreductase
Chain: A: PDB Molecule:nitric-oxide synthase;
PDBTitle: bovine endothelial nitric oxide synthase heme domain complexed with l-2 arg and no(h4b-free)
54d1nosa_



not modelled 6.6 15
Fold:Nitric oxide (NO) synthase oxygenase domain
Superfamily:Nitric oxide (NO) synthase oxygenase domain
Family:Nitric oxide (NO) synthase oxygenase domain
55c1ve0A_



not modelled 6.6 60
PDB header:metal binding protein
Chain: A: PDB Molecule:hypothetical protein (st2072);
PDBTitle: crystal structure of uncharacterized protein st2072 from sulfolobus2 tokodaii
56c2cu5C_



not modelled 6.6 60
PDB header:structural genomics, unknown function
Chain: C: PDB Molecule:conserved hypothetical protein tt1486;
PDBTitle: crystal structure of the conserved hypothetical protein tt1486 from2 thermus thermophilus hb8
57d1vmja_



not modelled 6.5 60
Fold:YjbQ-like
Superfamily:YjbQ-like
Family:YjbQ-like
58c2n1pA_



not modelled 6.5 21
PDB header:viral protein
Chain: A: PDB Molecule:non-structural protein 5b, ns5b;
PDBTitle: structure of the c-terminal membrane domain of hcv ns5b protein
59c4xtrG_



not modelled 6.5 32
PDB header:hydrolase/transport protein
Chain: G: PDB Molecule:pep12p;
PDBTitle: structure of get3 bound to the transmembrane domain of pep12
60c3zf6A_



not modelled 6.4 9
PDB header:hydrolase
Chain: A: PDB Molecule:dutpase;
PDBTitle: phage dutpases control transfer of virulence genes by a proto-2 oncogenic g protein-like mechanism. (staphylococcus bacteriophage3 80alpha dutpase d81a d110c s168c mutant with dupnhpp).
61c4rp9A_



not modelled 6.3 22
PDB header:membrane protein
Chain: A: PDB Molecule:ascorbate-specific permease iic component ulaa;
PDBTitle: bacterial vitamin c transporter ulaa/sgat in c2 form
62d1om4a_



not modelled 6.2 20
Fold:Nitric oxide (NO) synthase oxygenase domain
Superfamily:Nitric oxide (NO) synthase oxygenase domain
Family:Nitric oxide (NO) synthase oxygenase domain
63c2p6hB_



not modelled 6.1 60
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:hypothetical protein;
PDBTitle: crystal structure of hypothetical protein ape1520 from aeropyrum2 pernix k1
64d1eysh2



not modelled 6.1 28
Fold:Single transmembrane helix
Superfamily:Photosystem II reaction centre subunit H, transmembrane region
Family:Photosystem II reaction centre subunit H, transmembrane region
65c4kkpA_



not modelled 6.1 25
PDB header:structural protein
Chain: A: PDB Molecule:rbma protein;
PDBTitle: crystal structure of vibrio cholerae rbma (crystal form 2)
66c4djiA_



not modelled 6.1 14
PDB header:transport protein
Chain: A: PDB Molecule:probable glutamate/gamma-aminobutyrate antiporter;
PDBTitle: structure of glutamate-gaba antiporter gadc
67c2p6cB_



not modelled 6.0 80
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:aq_2013 protein;
PDBTitle: crystal structure of hypothetical protein aq_2013 from aquifex2 aeolicus vf5.
68c5azdA_



not modelled 5.9 16
PDB header:transport protein
Chain: A: PDB Molecule:bacteriorhodopsin;
PDBTitle: crystal structure of thermophilic rhodopsin.
69d1euwa_



not modelled 5.8 19
Fold:beta-clip
Superfamily:dUTPase-like
Family:dUTPase-like
70c2okdB_



not modelled 5.7 11
PDB header:hydrolase
Chain: B: PDB Molecule:deoxyuridine 5'-triphosphate nucleotidohydrolase;
PDBTitle: high resolution crystal structures of vaccinia virus dutpase
71c3ecyA_



not modelled 5.6 14
PDB header:hydrolase
Chain: A: PDB Molecule:cg4584-pa, isoform a (bcdna.ld08534);
PDBTitle: crystal structural analysis of drosophila melanogaster dutpase
72c5zdnA_



not modelled 5.6 18
PDB header:hydrolase
Chain: A: PDB Molecule:fomd;
PDBTitle: the complex structure of fomd with cdp
73c3am6C_



not modelled 5.6 22
PDB header:transport protein
Chain: C: PDB Molecule:rhodopsin-2;
PDBTitle: crystal structure of the proton pumping rhodopsin ar2 from marine alga2 acetabularia acetabulum
74d1c6va_



not modelled 5.6 43
Fold:Ribonuclease H-like motif
Superfamily:Ribonuclease H-like
Family:Retroviral integrase, catalytic domain
75c2an7A_



not modelled 5.5 17
PDB header:dna binding protein
Chain: A: PDB Molecule:protein pard;
PDBTitle: solution structure of the bacterial antidote pard
76d1m9ma_



not modelled 5.2 17
Fold:Nitric oxide (NO) synthase oxygenase domain
Superfamily:Nitric oxide (NO) synthase oxygenase domain
Family:Nitric oxide (NO) synthase oxygenase domain
77c5lc5m_



not modelled 5.2 13
PDB header:oxidoreductase
Chain: M: PDB Molecule:nadh-ubiquinone oxidoreductase chain 4;
PDBTitle: structure of mammalian respiratory complex i, class2
78d1q5uz_



not modelled 5.1 8
Fold:beta-clip
Superfamily:dUTPase-like
Family:dUTPase-like
79c2rlfA_



not modelled 5.1 25
PDB header:proton transport
Chain: A: PDB Molecule:matrix protein 2;
PDBTitle: proton channel m2 from influenza a in complex with2 inhibitor rimantadine
80d2r31a1



not modelled 5.1 18
Fold:ATP12-like
Superfamily:ATP12-like
Family:ATP12-like

Binding site prediction 

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below