Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2254c_(-)_2528530_2528985
DateMon Aug 5 13:25:39 BST 2019
Unique Job ID79e3d7085eaac3cd
SequenceLRYRDLETVA ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:55.430 Y:48.199 Z:57.871
Model (left) based on template c5vkvA_
Top template information
PDB header:oxidoreductase
Chain: A: PDB Molecule:cytochrome c-type biogenesis protein ccda;
PDBTitle: solution nmr structure of the membrane electron transporter ccda
Confidence and coverage
Confidence: 98.2% Coverage: 95%
144 residues ( 95% of your sequence) have been modelled with 98.2% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c5vkvA_



98.2 17
PDB header:oxidoreductase
Chain: A: PDB Molecule:cytochrome c-type biogenesis protein ccda;
PDBTitle: solution nmr structure of the membrane electron transporter ccda
2c2n4xA_



93.0 12
PDB header:membrane protein
Chain: A: PDB Molecule:cytochrome c-type biogenesis protein (ccda);
PDBTitle: structure of the transmembrane electron transporter ccda
3c1afoB_



16.9 18
PDB header:integral membrane protein
Chain: B: PDB Molecule:glycophorin a;
PDBTitle: dimeric transmembrane domain of human glycophorin a, nmr,2 20 structures
4c4kt0F_



11.5 18
PDB header:electron transport
Chain: F: PDB Molecule:photosystem i subunit iii;
PDBTitle: crystal structure of a virus like photosystem i from the2 cyanobacterium synechocystis pcc 6803
5d1jb0f_



10.9 18
Fold:Single transmembrane helix
Superfamily:Subunit III of photosystem I reaction centre, PsaF
Family:Subunit III of photosystem I reaction centre, PsaF
6c6fosF_



10.6 15
PDB header:photosynthesis
Chain: F: PDB Molecule:photosystem i reaction center subunit ii;
PDBTitle: cyanidioschyzon merolae photosystem i
7d1j0ta_



7.8 46
Fold:Crustacean CHH/MIH/GIH neurohormone
Superfamily:Crustacean CHH/MIH/GIH neurohormone
Family:Crustacean CHH/MIH/GIH neurohormone
8c1j0tA_



7.8 46
PDB header:hormone/growth factor
Chain: A: PDB Molecule:molt-inhibiting hormone;
PDBTitle: the solution structure of molt-inhibiting hormone from the2 kuruma prawn
9c2jp3A_



7.8 13
PDB header:transcription
Chain: A: PDB Molecule:fxyd domain-containing ion transport regulator 4;
PDBTitle: solution structure of the human fxyd4 (chif) protein in sds2 micelles
10c6igzF_



7.7 15
PDB header:plant protein
Chain: F: PDB Molecule:psaf;
PDBTitle: structure of psi-lhci
11c6cfwF_



7.2 10
PDB header:membrane protein
Chain: F: PDB Molecule:monovalent cation/h+ antiporter subunit b;
PDBTitle: cryoem structure of a respiratory membrane-bound hydrogenase
12c6ijjF_



7.0 16
PDB header:membrane protein
Chain: F: PDB Molecule:psaf;
PDBTitle: photosystem i of chlamydomonas reinhardtii
13c5n6mA_



6.9 11
PDB header:membrane protein
Chain: A: PDB Molecule:apolipoprotein n-acyltransferase;
PDBTitle: structure of the membrane integral lipoprotein n-acyltransferase lnt2 from p. aeruginosa
14c2mkvA_



6.8 14
PDB header:transport protein
Chain: A: PDB Molecule:sodium/potassium-transporting atpase subunit gamma;
PDBTitle: structure of the na,k-atpase regulatory protein fxyd2b in micelles
15c5xtdm_



6.7 12
PDB header:oxidoreductase/electron transport
Chain: M: PDB Molecule:nadh-ubiquinone oxidoreductase 75 kda subunit,
PDBTitle: cryo-em structure of human respiratory complex i
16c2jo1A_



6.5 13
PDB header:hydrolase regulator
Chain: A: PDB Molecule:phospholemman;
PDBTitle: structure of the na,k-atpase regulatory protein fxyd1 in2 micelles
17c5ireA_



5.9 13
PDB header:virus
Chain: A: PDB Molecule:e protein;
PDBTitle: the cryo-em structure of zika virus
18c5wsnC_



5.7 13
PDB header:virus
Chain: C: PDB Molecule:e protein;
PDBTitle: structure of japanese encephalitis virus
19c3n23E_



5.7 15
PDB header:hydrolase
Chain: E: PDB Molecule:na+/k+ atpase gamma subunit transcript variant a;
PDBTitle: crystal structure of the high affinity complex between ouabain and the2 e2p form of the sodium-potassium pump
20c1p58C_



5.6 13
PDB header:virus
Chain: C: PDB Molecule:major envelope protein e;
PDBTitle: complex organization of dengue virus membrane proteins as revealed by2 9.5 angstrom cryo-em reconstruction
21c4b03A_



not modelled 5.5 20
PDB header:virus
Chain: A: PDB Molecule:dengue virus 1 e protein;
PDBTitle: 6a electron cryomicroscopy structure of immature dengue virus serotype2 1
22c3s32A_



not modelled 5.4 13
PDB header:transcription
Chain: A: PDB Molecule:set1/ash2 histone methyltransferase complex subunit ash2;
PDBTitle: crystal structure of ash2l n-terminal domain
23c2mfrA_



not modelled 5.4 12
PDB header:transferase
Chain: A: PDB Molecule:insulin receptor;
PDBTitle: solution structure of the transmembrane domain of the insulin receptor2 in micelles
24c5o6vC_



not modelled 5.3 13
PDB header:virus
Chain: C: PDB Molecule:envelope protein;
PDBTitle: the cryo-em structure of tick-borne encephalitis virus complexed with2 fab fragment of neutralizing antibody 19/1786
25c2o01F_



not modelled 5.3 18
PDB header:photosynthesis
Chain: F: PDB Molecule:photosystem i reaction center subunit iii, chloroplast;
PDBTitle: the structure of a plant photosystem i supercomplex at 3.4 angstrom2 resolution

Binding site prediction 

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below