Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2255c_(-)_2528990_2529184
DateMon Aug 5 13:25:39 BST 2019
Unique Job IDaf6100fa78d1ce9b
SequenceVDGIVDRGVR ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:19.723 Y:21.121 Z:18.918
Model (left) based on template c5z7iC_
Top template information
PDB header:dna binding protein/dna
Chain: C: PDB Molecule:cell cycle regulatory protein gcra;
PDBTitle: caulobacter crescentus gcra dna-binding domain(dbd)in complex with2 unmethylated dsdna
Confidence and coverage
Confidence: 12.8% Coverage: 31%
20 residues ( 31% of your sequence) have been modelled with 12.8% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
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3D viewing
Interactive 3D view in JSmol
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Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c5z7iC_



12.8 50
PDB header:dna binding protein/dna
Chain: C: PDB Molecule:cell cycle regulatory protein gcra;
PDBTitle: caulobacter crescentus gcra dna-binding domain(dbd)in complex with2 unmethylated dsdna
2c5t17A_



9.7 22
PDB header:transferase
Chain: A: PDB Molecule:phosphocarrier protein npr;
PDBTitle: nmr structure of the e. coli protein npr, residues 1-85
3d2hpra_



8.7 22
Fold:HPr-like
Superfamily:HPr-like
Family:HPr-like
4d1qr5a_



8.5 25
Fold:HPr-like
Superfamily:HPr-like
Family:HPr-like
5d1ka5a_



7.9 24
Fold:HPr-like
Superfamily:HPr-like
Family:HPr-like
6d1cm3a_



7.7 22
Fold:HPr-like
Superfamily:HPr-like
Family:HPr-like
7c3ihsB_



7.4 32
PDB header:transport protein
Chain: B: PDB Molecule:phosphocarrier protein hpr;
PDBTitle: crystal structure of a phosphocarrier protein hpr from2 bacillus anthracis str. ames
8c3le1B_



7.3 29
PDB header:transferase
Chain: B: PDB Molecule:phosphotransferase system, hpr-related proteins;
PDBTitle: crystal structure of apohpr monomer from thermoanaerobacter2 tengcongensis
9d2nzul1



6.6 29
Fold:HPr-like
Superfamily:HPr-like
Family:HPr-like
10d1pcha_



6.5 24
Fold:HPr-like
Superfamily:HPr-like
Family:HPr-like
11d1ptfa_



6.0 25
Fold:HPr-like
Superfamily:HPr-like
Family:HPr-like
12d1zvvj1



5.4 34
Fold:HPr-like
Superfamily:HPr-like
Family:HPr-like

Binding site prediction 

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If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite