Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2262c_(-)_2534480_2535562
DateMon Aug 5 13:25:40 BST 2019
Unique Job IDd004172d13c0d884
SequenceMALRAGARRQ ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:81.889 Y:46.666 Z:56.182
Model (left) based on template c5n6mA_
Top template information
PDB header:membrane protein
Chain: A: PDB Molecule:apolipoprotein n-acyltransferase;
PDBTitle: structure of the membrane integral lipoprotein n-acyltransferase lnt2 from p. aeruginosa
Confidence and coverage
Confidence:100.0% Coverage: 93%
336 residues ( 93% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c5n6mA_



100.0 24
PDB header:membrane protein
Chain: A: PDB Molecule:apolipoprotein n-acyltransferase;
PDBTitle: structure of the membrane integral lipoprotein n-acyltransferase lnt2 from p. aeruginosa
2c5vrhA_



100.0 24
PDB header:transferase
Chain: A: PDB Molecule:apolipoprotein n-acyltransferase;
PDBTitle: apolipoprotein n-acyltransferase c387s active site mutant
3c2w1vA_



99.7 18
PDB header:hydrolase
Chain: A: PDB Molecule:nitrilase homolog 2;
PDBTitle: crystal structure of mouse nitrilase-2 at 1.4a resolution
4d1uf5a_



99.7 19
Fold:Carbon-nitrogen hydrolase
Superfamily:Carbon-nitrogen hydrolase
Family:Carbamilase
5c2e11B_



99.7 22
PDB header:hydrolase
Chain: B: PDB Molecule:hydrolase;
PDBTitle: the crystal structure of xc1258 from xanthomonas campestris: a cn-2 hydrolase superfamily protein with an arsenic adduct in the active3 site
6c5khaA_



99.7 21
PDB header:ligase
Chain: A: PDB Molecule:glutamine-dependent nad+ synthetase;
PDBTitle: structure of glutamine-dependent nad+ synthetase from acinetobacter2 baumannii in complex with adenosine diphosphate (adp)
7d1emsa2



99.7 12
Fold:Carbon-nitrogen hydrolase
Superfamily:Carbon-nitrogen hydrolase
Family:Nitrilase
8c5h8lM_



99.7 24
PDB header:hydrolase
Chain: M: PDB Molecule:n-carbamoylputrescine amidohydrolase;
PDBTitle: crystal structure of medicago truncatula n-carbamoylputrescine2 amidohydrolase (mtcpa) c158s mutant in complex with putrescine
9c1emsB_



99.7 13
PDB header:antitumor protein
Chain: B: PDB Molecule:nit-fragile histidine triad fusion protein;
PDBTitle: crystal structure of the c. elegans nitfhit protein
10c3hkxA_



99.7 22
PDB header:hydrolase
Chain: A: PDB Molecule:amidase;
PDBTitle: crystal structure analysis of an amidase from nesterenkonia sp.
11d1j31a_



99.7 23
Fold:Carbon-nitrogen hydrolase
Superfamily:Carbon-nitrogen hydrolase
Family:Carbamilase
12c3wuyA_



99.7 17
PDB header:hydrolase
Chain: A: PDB Molecule:nitrilase;
PDBTitle: crystal structure of nit6803
13c5hyyA_



99.7 17
PDB header:hydrolase
Chain: A: PDB Molecule:nta1p;
PDBTitle: crystal structure of n-terminal amidase
14c3dlaD_



99.6 24
PDB header:ligase
Chain: D: PDB Molecule:glutamine-dependent nad(+) synthetase;
PDBTitle: x-ray crystal structure of glutamine-dependent nad+ synthetase from2 mycobacterium tuberculosis bound to naad+ and don
15c4hg3C_



99.6 18
PDB header:hydrolase
Chain: C: PDB Molecule:probable hydrolase nit2;
PDBTitle: structural insights into yeast nit2: wild-type yeast nit2 in complex2 with alpha-ketoglutarate
16c2plqA_



99.6 23
PDB header:hydrolase
Chain: A: PDB Molecule:aliphatic amidase;
PDBTitle: crystal structure of the amidase from geobacillus pallidus rapc8
17c2vhiG_



99.6 19
PDB header:hydrolase
Chain: G: PDB Molecule:cg3027-pa;
PDBTitle: crystal structure of a pyrimidine degrading enzyme from2 drosophila melanogaster
18c6ftqA_



99.6 14
PDB header:hydrolase
Chain: A: PDB Molecule:beta-ureidopropionase;
PDBTitle: crystal structure of human beta-ureidopropionase (beta-alanine2 synthase) - mutant t299c
19c4f4hA_



99.6 24
PDB header:ligase
Chain: A: PDB Molecule:glutamine dependent nad+ synthetase;
PDBTitle: crystal structure of a glutamine dependent nad+ synthetase from2 burkholderia thailandensis
20c3ilvA_



99.6 12
PDB header:ligase
Chain: A: PDB Molecule:glutamine-dependent nad(+) synthetase;
PDBTitle: crystal structure of a glutamine-dependent nad(+) synthetase2 from cytophaga hutchinsonii
21d1f89a_



not modelled 99.6 21
Fold:Carbon-nitrogen hydrolase
Superfamily:Carbon-nitrogen hydrolase
Family:Nitrilase
22c2vhhA_



not modelled 99.6 19
PDB header:hydrolase
Chain: A: PDB Molecule:cg3027-pa;
PDBTitle: crystal structure of a pyrimidine degrading enzyme from2 drosophila melanogaster
23c3n05B_



not modelled 99.6 21
PDB header:ligase
Chain: B: PDB Molecule:nh(3)-dependent nad(+) synthetase;
PDBTitle: crystal structure of nh3-dependent nad+ synthetase from streptomyces2 avermitilis
24c6i00C_



not modelled 99.6 25
PDB header:hydrolase
Chain: C: PDB Molecule:bifunctional nitrilase/nitrile hydratase nit4;
PDBTitle: cryo-em informed directed evolution of nitrilase 4 leads to a change2 in quaternary structure.
25c2e2kC_



not modelled 99.5 17
PDB header:hydrolase
Chain: C: PDB Molecule:formamidase;
PDBTitle: helicobacter pylori formamidase amif contains a fine-tuned cysteine-2 glutamate-lysine catalytic triad
26c6mg6D_



not modelled 99.5 15
PDB header:hydrolase
Chain: D: PDB Molecule:carbon-nitrogen hydrolase;
PDBTitle: crystal structure of carbon-nitrogen hydrolase from helicobacter2 pylori g27
27c4cyyA_



not modelled 99.5 20
PDB header:hydrolase
Chain: A: PDB Molecule:pantetheinase;
PDBTitle: the structure of vanin-1: defining the link between metabolic disease,2 oxidative stress and inflammation
28d1ejia_



not modelled 63.8 26
Fold:PLP-dependent transferase-like
Superfamily:PLP-dependent transferases
Family:GABA-aminotransferase-like
29c6ic4I_



not modelled 61.5 15
PDB header:protein transport
Chain: I: PDB Molecule:abc transporter atp-binding protein;
PDBTitle: cryo-em structure of the a. baumannii mla complex at 8.7 a resolution
30c3n8hA_



not modelled 59.6 14
PDB header:ligase
Chain: A: PDB Molecule:pantothenate synthetase;
PDBTitle: crystal structure of pantoate-beta-alanine ligase from francisella2 tularensis
31c3gfoA_



not modelled 59.4 11
PDB header:atp binding protein
Chain: A: PDB Molecule:cobalt import atp-binding protein cbio 1;
PDBTitle: structure of cbio1 from clostridium perfringens: part of the abc2 transporter complex cbionq.
32d1g2912



not modelled 58.7 9
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:ABC transporter ATPase domain-like
33c5y0tD_



not modelled 56.8 11
PDB header:ligase
Chain: D: PDB Molecule:thermotoga maritima tmcal;
PDBTitle: crystal structure of thermotoga maritima tmcal bound with alpha-thio2 atp(form ii)
34d1v43a3



not modelled 53.7 12
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:ABC transporter ATPase domain-like
35c1vciA_



not modelled 53.0 12
PDB header:transport protein
Chain: A: PDB Molecule:sugar-binding transport atp-binding protein;
PDBTitle: crystal structure of the atp-binding cassette of multisugar2 transporter from pyrococcus horikoshii ot3 complexed with3 atp
36c3uk2B_



not modelled 50.7 16
PDB header:ligase
Chain: B: PDB Molecule:pantothenate synthetase;
PDBTitle: the structure of pantothenate synthetase from burkholderia2 thailandensis
37c5b57D_



not modelled 50.6 12
PDB header:metal transport
Chain: D: PDB Molecule:hemin import atp-binding protein hmuv;
PDBTitle: inward-facing conformation of abc heme importer bhuuv from2 burkholderia cenocepacia
38d1v8fa_



not modelled 47.9 16
Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Nucleotidylyl transferase
Family:Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC)
39c4mycC_



not modelled 47.6 8
PDB header:transport protein
Chain: C: PDB Molecule:iron-sulfur clusters transporter atm1, mitochondrial;
PDBTitle: structure of the mitochondrial abc transporter, atm1
40c2ejcA_



not modelled 46.5 16
PDB header:ligase
Chain: A: PDB Molecule:pantoate--beta-alanine ligase;
PDBTitle: crystal structure of pantoate--beta-alanine ligase (panc)2 from thermotoga maritima
41d2awna2



not modelled 46.5 11
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:ABC transporter ATPase domain-like
42c5d95A_



not modelled 46.1 17
PDB header:transferase
Chain: A: PDB Molecule:aminotransferase class-iii;
PDBTitle: structure of thermostable omega-transaminase
43d1yexa1



not modelled 45.4 16
Fold:Thioredoxin fold
Superfamily:Thioredoxin-like
Family:Glutathione peroxidase-like
44c1q1bD_



not modelled 45.2 11
PDB header:transport protein
Chain: D: PDB Molecule:maltose/maltodextrin transport atp-binding protein malk;
PDBTitle: crystal structure of e. coli malk in the nucleotide-free form
45c4g1uD_



not modelled 45.1 12
PDB header:transport protein/hydrolase
Chain: D: PDB Molecule:hemin import atp-binding protein hmuv;
PDBTitle: x-ray structure of the bacterial heme transporter hmuuv from yersinia2 pestis
46c3wmeA_



not modelled 44.6 14
PDB header:transport protein
Chain: A: PDB Molecule:atp-binding cassette, sub-family b, member 1;
PDBTitle: crystal structure of an inward-facing eukaryotic abc multidrug2 transporter
47d3dhwc1



not modelled 44.5 14
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:ABC transporter ATPase domain-like
48c4e77A_



not modelled 44.5 19
PDB header:isomerase
Chain: A: PDB Molecule:glutamate-1-semialdehyde 2,1-aminomutase;
PDBTitle: 2.0a crystal structure of a glutamate-1-semialdehyde aminotransferase2 from yersinia pestis co92
49c3mxtA_



not modelled 44.1 20
PDB header:ligase
Chain: A: PDB Molecule:pantothenate synthetase;
PDBTitle: crystal structure of pantoate-beta-alanine ligase from campylobacter2 jejuni
50d1oxxk2



not modelled 43.6 22
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:ABC transporter ATPase domain-like
51c3l44A_



not modelled 43.5 14
PDB header:isomerase
Chain: A: PDB Molecule:glutamate-1-semialdehyde 2,1-aminomutase 1;
PDBTitle: crystal structure of bacillus anthracis heml-1, glutamate semialdehyde2 aminotransferase
52c2yyzA_



not modelled 43.3 13
PDB header:transport protein
Chain: A: PDB Molecule:sugar abc transporter, atp-binding protein;
PDBTitle: crystal structure of sugar abc transporter, atp-binding protein
53c5y0nB_



not modelled 42.0 13
PDB header:ligase
Chain: B: PDB Molecule:upf0348 protein b4417_3650;
PDBTitle: crystal structure of bacillus subtilis tmcal bound with atp (semet2 derivative)
54c3bs8A_



not modelled 40.3 11
PDB header:isomerase
Chain: A: PDB Molecule:glutamate-1-semialdehyde 2,1-aminomutase;
PDBTitle: crystal structure of glutamate 1-semialdehyde aminotransferase2 complexed with pyridoxamine-5'-phosphate from bacillus subtilis
55c3n0lA_



not modelled 39.5 26
PDB header:transferase
Chain: A: PDB Molecule:serine hydroxymethyltransferase;
PDBTitle: crystal structure of serine hydroxymethyltransferase from2 campylobacter jejuni
56c2cy8A_



not modelled 38.7 17
PDB header:transferase
Chain: A: PDB Molecule:d-phenylglycine aminotransferase;
PDBTitle: crystal structure of d-phenylglycine aminotransferase (d-phgat) from2 pseudomonas strutzeri st-201
57d1ihoa_



not modelled 37.2 24
Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Nucleotidylyl transferase
Family:Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC)
58c2zsmA_



not modelled 35.8 24
PDB header:isomerase
Chain: A: PDB Molecule:glutamate-1-semialdehyde 2,1-aminomutase;
PDBTitle: crystal structure of glutamate-1-semialdehyde 2,1-2 aminomutase from aeropyrum pernix, hexagonal form
59c4mkiB_



not modelled 35.2 12
PDB header:hydrolase
Chain: B: PDB Molecule:energy-coupling factor transporter atp-binding protein
PDBTitle: cobalt transporter atp-binding subunit
60d1jj7a_



not modelled 35.1 11
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:ABC transporter ATPase domain-like
61c4fwiB_



not modelled 34.6 13
PDB header:transport protein
Chain: B: PDB Molecule:abc-type dipeptide/oligopeptide/nickel transport system,
PDBTitle: crystal structure of the nucleotide-binding domain of a dipeptide abc2 transporter
62c1oxtB_



not modelled 33.3 21
PDB header:transport protein
Chain: B: PDB Molecule:abc transporter, atp binding protein;
PDBTitle: crystal structure of glcv, the abc-atpase of the glucose abc2 transporter from sulfolobus solfataricus
63d1l2ta_



not modelled 33.2 13
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:ABC transporter ATPase domain-like
64c2a7vA_



not modelled 33.1 28
PDB header:transferase
Chain: A: PDB Molecule:serine hydroxymethyltransferase;
PDBTitle: human mitochondrial serine hydroxymethyltransferase 2
65d2a7va1



not modelled 33.1 28
Fold:PLP-dependent transferase-like
Superfamily:PLP-dependent transferases
Family:GABA-aminotransferase-like
66c2it1B_



not modelled 32.8 13
PDB header:transport protein
Chain: B: PDB Molecule:362aa long hypothetical maltose/maltodextrin
PDBTitle: structure of ph0203 protein from pyrococcus horikoshii
67c4hzuB_



not modelled 31.7 13
PDB header:hydrolase, transport protein
Chain: B: PDB Molecule:energy-coupling factor transporter atp-binding protein ecfa
PDBTitle: structure of a bacterial energy-coupling factor transporter
68c3i4jC_



not modelled 31.6 8
PDB header:transferase
Chain: C: PDB Molecule:aminotransferase, class iii;
PDBTitle: crystal structure of aminotransferase, class iii from deinococcus2 radiodurans
69c1z47B_



not modelled 31.1 8
PDB header:ligand binding protein
Chain: B: PDB Molecule:putative abc-transporter atp-binding protein;
PDBTitle: structure of the atpase subunit cysa of the putative sulfate atp-2 binding cassette (abc) transporter from alicyclobacillus3 acidocaldarius
70c3dodA_



not modelled 30.3 12
PDB header:transferase
Chain: A: PDB Molecule:adenosylmethionine-8-amino-7-oxononanoate aminotransferase;
PDBTitle: crystal structure of plp bound 7,8-diaminopelargonic acid synthase in2 bacillus subtilis
71d2gsaa_



not modelled 28.8 15
Fold:PLP-dependent transferase-like
Superfamily:PLP-dependent transferases
Family:GABA-aminotransferase-like
72c6iz9B_



not modelled 28.2 15
PDB header:transferase
Chain: B: PDB Molecule:beta-transaminase;
PDBTitle: crystal structure of the apo form of a beta-transaminase from2 mesorhizobium sp. strain luk
73c5ochH_



not modelled 27.9 17
PDB header:hydrolase
Chain: H: PDB Molecule:atp-binding cassette sub-family b member 8, mitochondrial;
PDBTitle: the crystal structure of human abcb8 in an outward-facing state
74c4uoxB_



not modelled 27.9 11
PDB header:transferase
Chain: B: PDB Molecule:putrescine aminotransferase;
PDBTitle: crystal structure of ygjg in complex with pyridoxal-5'-phosphate2 and putrescine
75c2ei9A_



not modelled 27.7 22
PDB header:gene regulation
Chain: A: PDB Molecule:non-ltr retrotransposon r1bmks orf2 protein;
PDBTitle: crystal structure of r1bm endonuclease domain
76c4hziA_



not modelled 27.6 22
PDB header:transport protein
Chain: A: PDB Molecule:abc transporter atp-binding protein;
PDBTitle: crystal structure of the leptospira interrogans atpase subunit of an2 orphan abc transporter
77c5u1dA_



not modelled 27.5 10
PDB header:transport protein
Chain: A: PDB Molecule:antigen peptide transporter 1;
PDBTitle: cryo-em structure of the human tap atp-binding cassette transporter
78c3d31B_



not modelled 27.3 10
PDB header:transport protein
Chain: B: PDB Molecule:sulfate/molybdate abc transporter, atp-binding protein;
PDBTitle: modbc from methanosarcina acetivorans
79c5viuB_



not modelled 27.1 17
PDB header:transferase
Chain: B: PDB Molecule:acetylornithine aminotransferase;
PDBTitle: crystal structure of acetylornithine aminotransferase from2 elizabethkingia anophelis
80c4yerB_



not modelled 27.0 8
PDB header:hydrolase
Chain: B: PDB Molecule:abc transporter atp-binding protein;
PDBTitle: crystal structure of an abc transporter atp-binding protein (tm_1403)2 from thermotoga maritima msb8 at 2.35 a resolution
81c5do7B_



not modelled 26.6 14
PDB header:transport protein
Chain: B: PDB Molecule:atp-binding cassette sub-family g member 8;
PDBTitle: crystal structure of the human sterol transporter abcg5/abcg8
82c6cd1A_



not modelled 26.5 30
PDB header:transferase
Chain: A: PDB Molecule:serine hydroxymethyltransferase;
PDBTitle: crystal structure of medicago truncatula serine2 hydroxymethyltransferase 3 (mtshmt3), complexes with reaction3 intermediates
83c2d62A_



not modelled 25.5 12
PDB header:sugar binding protein
Chain: A: PDB Molecule:multiple sugar-binding transport atp-binding
PDBTitle: crystal structure of multiple sugar binding transport atp-2 binding protein
84c2ordA_



not modelled 24.7 8
PDB header:transferase
Chain: A: PDB Molecule:acetylornithine aminotransferase;
PDBTitle: crystal structure of acetylornithine aminotransferase (ec 2.6.1.11)2 (acoat) (tm1785) from thermotoga maritima at 1.40 a resolution
85c3lv2A_



not modelled 24.5 24
PDB header:transferase
Chain: A: PDB Molecule:adenosylmethionine-8-amino-7-oxononanoate aminotransferase;
PDBTitle: crystal structure of mycobacterium tuberculosis 7,8-diaminopelargonic2 acid synthase in complex with substrate analog sinefungin
86d2pmka1



not modelled 24.3 9
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:ABC transporter ATPase domain-like
87c2olkD_



not modelled 23.6 13
PDB header:hydrolase
Chain: D: PDB Molecule:amino acid abc transporter;
PDBTitle: abc protein artp in complex with adp-beta-s
88c3fvqB_



not modelled 23.6 8
PDB header:hydrolase
Chain: B: PDB Molecule:fe(3+) ions import atp-binding protein fbpc;
PDBTitle: crystal structure of the nucleotide binding domain fbpc complexed with2 atp
89c3dhwC_



not modelled 23.6 13
PDB header:membrane protein/hydrolase
Chain: C: PDB Molecule:methionine import atp-binding protein metn;
PDBTitle: crystal structure of methionine importer metni
90c2ykyB_



not modelled 23.3 15
PDB header:transferase
Chain: B: PDB Molecule:beta-transaminase;
PDBTitle: structural determinants of the beta-selectivity of a bacterial2 aminotransferase
91d2cfba1



not modelled 23.2 17
Fold:PLP-dependent transferase-like
Superfamily:PLP-dependent transferases
Family:GABA-aminotransferase-like
92c2nq2C_



not modelled 23.1 18
PDB header:metal transport
Chain: C: PDB Molecule:hypothetical abc transporter atp-binding protein
PDBTitle: an inward-facing conformation of a putative metal-chelate2 type abc transporter.
93c4tqvO_



not modelled 22.8 10
PDB header:transport protein
Chain: O: PDB Molecule:algs;
PDBTitle: crystal structure of a bacterial abc transporter involved in the2 import of the acidic polysaccharide alginate
94d3d31a2



not modelled 22.4 10
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:ABC transporter ATPase domain-like
95d1bj4a_



not modelled 22.0 24
Fold:PLP-dependent transferase-like
Superfamily:PLP-dependent transferases
Family:GABA-aminotransferase-like
96d1rv3a_



not modelled 21.9 24
Fold:PLP-dependent transferase-like
Superfamily:PLP-dependent transferases
Family:GABA-aminotransferase-like
97c3jcuO_



not modelled 21.1 21
PDB header:membrane protein
Chain: O: PDB Molecule:oxygen-evolving enhancer protein 1, chloroplastic;
PDBTitle: cryo-em structure of spinach psii-lhcii supercomplex at 3.2 angstrom2 resolution
98c5f15A_



not modelled 21.1 12
PDB header:transferase
Chain: A: PDB Molecule:4-amino-4-deoxy-l-arabinose (l-ara4n) transferase;
PDBTitle: crystal structure of arnt from cupriavidus metallidurans bound to2 undecaprenyl phosphate
99c5g4iA_



not modelled 20.9 11
PDB header:transferase
Chain: A: PDB Molecule:phospholyase;
PDBTitle: plp-dependent phospholyase a1rdf1 from arthrobacter aurescens tc1

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Transmembrane helix prediction 

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