Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2288_(-)_2561338_2561715
DateMon Aug 5 13:25:43 BST 2019
Unique Job ID5bec7ef8fdcda418
SequenceVSRRRPLIEP ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:14.839 Y:5.945 Z:9.203
Model (left) based on template c1izlM_
Top template information
PDB header:photosynthesis
Chain: M: PDB Molecule:photosystem ii: subunit psbc;
PDBTitle: crystal structure of photosystem ii
Confidence and coverage
Confidence: 25.0% Coverage: 26%
32 residues ( 26% of your sequence) have been modelled with 25.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c1izlM_



25.0 3
PDB header:photosynthesis
Chain: M: PDB Molecule:photosystem ii: subunit psbc;
PDBTitle: crystal structure of photosystem ii
2c2mj6A_



18.9 27
PDB header:transferase
Chain: A: PDB Molecule:putative two-component system histidine kinase;
PDBTitle: solution structure of the extracellular sensor domain of drak2 histidine kinase
3c4rrfD_



17.5 63
PDB header:ligase
Chain: D: PDB Molecule:threonine--trna ligase;
PDBTitle: editing domain of threonyl-trna synthetase from methanococcus2 jannaschii with l-ser3aa
4c1izlC_



16.9 0
PDB header:photosynthesis
Chain: C: PDB Molecule:photosystem ii: subunit psbc;
PDBTitle: crystal structure of photosystem ii
5c2hl2A_



16.5 50
PDB header:ligase
Chain: A: PDB Molecule:threonyl-trna synthetase;
PDBTitle: crystal structure of the editing domain of threonyl-trna2 synthetase from pyrococcus abyssi in complex with an3 analog of seryladenylate
6c4rrcA_



16.1 63
PDB header:ligase
Chain: A: PDB Molecule:probable threonine--trna ligase 2;
PDBTitle: n-terminal editing domain of threonyl-trna synthetase from aeropyrum2 pernix with l-thr3aa (snapshot 3)
7c2mvaA_



14.6 50
PDB header:toxin
Chain: A: PDB Molecule:rhtx toxin;
PDBTitle: solution structure of the toxin, rhtx
8c5ijlA_



14.1 45
PDB header:transferase
Chain: A: PDB Molecule:dna polymerase ii large subunit;
PDBTitle: d-family dna polymerase - dp2 subunit (catalytic subunit)
9c6hmsB_



13.3 45
PDB header:replication
Chain: B: PDB Molecule:dna polymerase ii large subunit,dna polymerase ii large
PDBTitle: cryo-em map of dna polymerase d from pyrococcus abyssi in complex with2 dna
10c5nd1A_



10.1 54
PDB header:virus
Chain: A: PDB Molecule:capsid protein;
PDBTitle: viral evolution results in multiple, surface-allocated enzymatic2 activities in a fungal double-stranded rna virus
11c3ctrA_



8.3 25
PDB header:hydrolase
Chain: A: PDB Molecule:poly(a)-specific ribonuclease parn;
PDBTitle: crystal structure of the rrm-domain of the poly(a)-specific2 ribonuclease parn bound to m7gtp
12d2cs3a1



8.3 56
Fold:RING/U-box
Superfamily:RING/U-box
Family:Variant RING domain
13c2knxA_



8.0 64
PDB header:protein binding
Chain: A: PDB Molecule:prolow-density lipoprotein receptor-related protein 1;
PDBTitle: solution structure of complement repeat cr17 from lrp-1
14c4qtkB_



6.5 57
PDB header:transcription/dna
Chain: B: PDB Molecule:white-opaque regulator 1;
PDBTitle: complex of wopr domain of wor1 in candida albicans with the 17bp dsdna
15d2nsfa2



6.3 41
Fold:SCP-like
Superfamily:SCP-like
Family:Micothiol-dependent maleylpyruvate isomerase C-terminal domain-like
16c2xu8B_



6.1 36
PDB header:structural genomics
Chain: B: PDB Molecule:pa1645;
PDBTitle: structure of pa1645
17c5ngnA_



5.8 50
PDB header:plant protein
Chain: A: PDB Molecule:lybatide 2;
PDBTitle: lybatide 2, a cystine-rich peptide from lycium barbarum
18d1k7ba_



5.8 45
Fold:LDL receptor-like module
Superfamily:LDL receptor-like module
Family:LDL receptor-like module
19c2g16A_



5.8 67
PDB header:luminescent protein
Chain: A: PDB Molecule:green fluorescent protein;
PDBTitle: structure of s65a y66s gfp variant after backbone2 fragmentation
20c5ngnB_



5.4 50
PDB header:plant protein
Chain: B: PDB Molecule:lybatide 2;
PDBTitle: lybatide 2, a cystine-rich peptide from lycium barbarum
21d1ajja_



not modelled 5.4 28
Fold:LDL receptor-like module
Superfamily:LDL receptor-like module
Family:LDL receptor-like module
22c5wcoC_



not modelled 5.4 69
PDB header:viral protein
Chain: C: PDB Molecule:ns2;
PDBTitle: matrix protein (m1) of infectious salmon anaemia virus
23d1whva_



not modelled 5.4 25
Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Canonical RBD
24c4m8bR_



not modelled 5.3 57
PDB header:transcription/dna
Chain: R: PDB Molecule:yhr177w;
PDBTitle: fungal protein
25c4wsiB_



not modelled 5.2 43
PDB header:peptide binding protein
Chain: B: PDB Molecule:maguk p55 subfamily member 5;
PDBTitle: crystal structure of pals1/crb complex
26d1thqa_



not modelled 5.2 45
Fold:Transmembrane beta-barrels
Superfamily:OMPA-like
Family:Outer membrane enzyme PagP
27c2l3iA_



not modelled 5.1 71
PDB header:antimicrobial protein
Chain: A: PDB Molecule:aoxki4a, antimicrobial peptide in spider venom;
PDBTitle: oxki4a, spider derived antimicrobial peptide
28c2kitA_



not modelled 5.1 67
PDB header:transferase
Chain: A: PDB Molecule:serine/threonine-protein kinase tor1;
PDBTitle: the solution structure of the reduced yeast tor1 fatc domain bound to2 dpc micelles at 298k
29c2jodB_



not modelled 5.1 83
PDB header:signaling protein
Chain: B: PDB Molecule:pituitary adenylate cyclase-activating
PDBTitle: pac1-rshort n-terminal ec domain pacap(6-38) complex
30d2o4aa1



not modelled 5.1 18
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:CUT domain

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