Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2290_(lppO)_2562609_2563124
DateMon Aug 5 13:25:43 BST 2019
Unique Job ID2183f00dd31a89fb
SequenceLTDPRHTVRI ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:41.419 Y:40.690 Z:43.566
Model (left) based on template c4zjmA_
Top template information
PDB header:unknown function
Chain: A: PDB Molecule:lipoprotein lpqh;
PDBTitle: crystal structure of mycobacterium tuberculosis lpqh (rv3763)
Confidence and coverage
Confidence: 97.4% Coverage: 61%
104 residues ( 61% of your sequence) have been modelled with 97.4% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c4zjmA_
97.4 21
PDB header:unknown function
Chain: A: PDB Molecule:lipoprotein lpqh;
PDBTitle: crystal structure of mycobacterium tuberculosis lpqh (rv3763)
2c4xinB_
97.1 24
PDB header:unknown function
Chain: B: PDB Molecule:lpqh orthologue;
PDBTitle: x-ray crystal structure of an lpqh orthologue from mycobacterium avium
3c2e6pA_
30.8 24
PDB header:structural protein
Chain: A: PDB Molecule:obscurin-like protein 1;
PDBTitle: solution structure of the ig-like domain (714-804) from2 human obscurin-like protein 1
4c2f8vY_
26.4 67
PDB header:contractile protein/contractile protein
Chain: Y: PDB Molecule:telethonin;
PDBTitle: structure of full length telethonin in complex with the n-terminus of2 titin
5d2icha1
23.4 21
Fold:AttH-like
Superfamily:AttH-like
Family:AttH-like
6c1ya5T_
23.3 67
PDB header:structural protein
Chain: T: PDB Molecule:telethonin;
PDBTitle: crystal structure of the titin domains z1z2 in complex with telethonin
7c4b4rA_
18.0 34
PDB header:cell adhesion
Chain: A: PDB Molecule:f18 fimbrial adhesin ac;
PDBTitle: crystal structure of the lectin domain of f18 fimbrial2 adhesin fedf in complex with blood group b type 13 hexasaccharide
8c1ye9A_
16.1 21
PDB header:oxidoreductase
Chain: A: PDB Molecule:catalase hpii;
PDBTitle: crystal structure of proteolytically truncated catalase2 hpii from e. coli
9d1je5a_
15.8 25
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Phage ssDNA-binding proteins
10c3lr4A_
13.5 44
PDB header:transferase
Chain: A: PDB Molecule:sensor protein;
PDBTitle: periplasmic domain of the riss sensor protein from burkholderia2 pseudomallei, barium phased at low ph
11d1vlfn1
10.9 45
Fold:Prealbumin-like
Superfamily:Cna protein B-type domain
Family:Cna protein B-type domain
12d1pfsa_
9.4 34
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Phage ssDNA-binding proteins
13c3cglF_
9.0 70
PDB header:fluorescent protein
Chain: F: PDB Molecule:gfp-like fluorescent chromoprotein dsfp483;
PDBTitle: crystal structure and raman studies of dsfp483, a cyan fluorescent2 protein from discosoma striata
14d1y0ua_
8.9 33
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:ArsR-like transcriptional regulators
15c4cabA_
8.9 21
PDB header:oxidoreductase
Chain: A: PDB Molecule:catalase;
PDBTitle: the refined structure of catalase dr1998 from deinococcus radiodurans2 at 2.6 a resolution
16c2pd0D_
8.6 22
PDB header:structural genomics, unknown function
Chain: D: PDB Molecule:hypothetical protein;
PDBTitle: protein cgd2_2020 from cryptosporidium parvum
17d1m7sa_
8.3 21
Fold:Heme-dependent catalase-like
Superfamily:Heme-dependent catalase-like
Family:Heme-dependent catalases
18d1jmxa5
8.3 24
Fold:Streptavidin-like
Superfamily:Quinohemoprotein amine dehydrogenase A chain, domain 3
Family:Quinohemoprotein amine dehydrogenase A chain, domain 3
19d1gwea_
7.7 29
Fold:Heme-dependent catalase-like
Superfamily:Heme-dependent catalase-like
Family:Heme-dependent catalases
20c6fx6A_
7.3 19
PDB header:unknown function
Chain: A: PDB Molecule:satie-ted;
PDBTitle: thioester domain of the staphylococcus aureus tie protein
21c4hwmA_
not modelled 7.2 39
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein yedd;
PDBTitle: crystal structure of a lipoprotein yedd (kpn_02420) from klebsiella2 pneumoniae subsp. pneumoniae mgh 78578 at 1.38 a resolution
22d1wwbx_
not modelled 6.9 13
Fold:Immunoglobulin-like beta-sandwich
Superfamily:Immunoglobulin
Family:I set domains
23c2rrlA_
not modelled 6.3 21
PDB header:protein transport
Chain: A: PDB Molecule:flagellar hook-length control protein;
PDBTitle: solution structure of the c-terminal domain of the flik
24d1p80a2
not modelled 6.3 17
Fold:Heme-dependent catalase-like
Superfamily:Heme-dependent catalase-like
Family:Heme-dependent catalases
25d1a4ea_
not modelled 6.2 21
Fold:Heme-dependent catalase-like
Superfamily:Heme-dependent catalase-like
Family:Heme-dependent catalases
26c1p81A_
not modelled 6.1 17
PDB header:oxidoreductase
Chain: A: PDB Molecule:catalase hpii;
PDBTitle: crystal structure of the d181e variant of catalase hpii2 from e. coli
27d1v8ka_
not modelled 5.9 30
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Motor proteins
28c3hi2C_
not modelled 5.9 30
PDB header:dna binding protein/toxin
Chain: C: PDB Molecule:hth-type transcriptional regulator mqsa(ygit);
PDBTitle: structure of the n-terminal domain of the e. coli antitoxin mqsa2 (ygit/b3021) in complex with the e. coli toxin mqsr (ygiu/b3022)
29c4wrnB_
not modelled 5.7 16
PDB header:structural protein
Chain: B: PDB Molecule:maltose-binding periplasmic protein,uromodulin;
PDBTitle: crystal structure of the polymerization region of human2 uromodulin/tamm-horsfall protein
30c3pn1A_
not modelled 5.6 18
PDB header:ligase/ligase inhibitor
Chain: A: PDB Molecule:dna ligase;
PDBTitle: novel bacterial nad+-dependent dna ligase inhibitors with broad2 spectrum potency and antibacterial efficacy in vivo
31d4blca_
not modelled 5.5 21
Fold:Heme-dependent catalase-like
Superfamily:Heme-dependent catalase-like
Family:Heme-dependent catalases
32d1dgfa_
not modelled 5.4 21
Fold:Heme-dependent catalase-like
Superfamily:Heme-dependent catalase-like
Family:Heme-dependent catalases
33c3ej6D_
not modelled 5.3 25
PDB header:oxidoreductase
Chain: D: PDB Molecule:catalase-3;
PDBTitle: neurospora crassa catalase-3 crystal structure
34c4f78A_
not modelled 5.3 11
PDB header:hydrolase
Chain: A: PDB Molecule:d,d-dipeptidase/d,d-carboxypeptidase;
PDBTitle: crystal structure of vancomycin resistance d,d-dipeptidase vanxyg
35d1wv3a1
not modelled 5.2 44
Fold:SMAD/FHA domain
Superfamily:SMAD/FHA domain
Family:EssC N-terminal domain-like
36c3j60I_
not modelled 5.2 50
PDB header:ribosome
Chain: I: PDB Molecule:40s ribosomal protein s8e;
PDBTitle: localization of the small subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome
37d2ivda2
not modelled 5.2 36
Fold:FAD-linked reductases, C-terminal domain
Superfamily:FAD-linked reductases, C-terminal domain
Family:L-aminoacid/polyamine oxidase
38c1sy7B_
not modelled 5.2 25
PDB header:oxidoreductase
Chain: B: PDB Molecule:catalase 1;
PDBTitle: crystal structure of the catalase-1 from neurospora crassa, native2 structure at 1.75a resolution.
39c2vrsC_
not modelled 5.2 24
PDB header:viral protein
Chain: C: PDB Molecule:sigma-c capsid protein;
PDBTitle: structure of avian reovirus sigmac117-326, c2 crystal form

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