Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2295_(-)_2566782_2567420
DateMon Aug 5 13:25:43 BST 2019
Unique Job ID73c140df282d448c
SequenceMDQSANHACL ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:19.213 Y:15.407 Z:24.145
Model (left) based on template c1bh7A_
Top template information
PDB header:membrane protein
Chain: A: PDB Molecule:band 3;
PDBTitle: a low energy structure for the final cytoplasmic loop of2 band 3, nmr, minimized average structure
Confidence and coverage
Confidence: 61.6% Coverage: 5%
11 residues ( 5% of your sequence) have been modelled with 61.6% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c1bh7A_



61.6 45
PDB header:membrane protein
Chain: A: PDB Molecule:band 3;
PDBTitle: a low energy structure for the final cytoplasmic loop of2 band 3, nmr, minimized average structure
2c4kjeA_



40.3 15
PDB header:oxidoreductase
Chain: A: PDB Molecule:glutaredoxin;
PDBTitle: atomic resolution structure of pfgrx1
3c6iqwA_



38.3 21
PDB header:rna binding protein/rna
Chain: A: PDB Molecule:csm1;
PDBTitle: cryo-em structure of csm effector complex
4c3fzaA_



35.6 16
PDB header:oxidoreductase
Chain: A: PDB Molecule:glutaredoxin;
PDBTitle: crystal structure of poplar glutaredoxin s12 in complex with2 glutathione and beta-mercaptoethanol
5c4i2uA_



35.1 18
PDB header:oxidoreductase
Chain: A: PDB Molecule:glutaredoxin;
PDBTitle: crystal structure of the reduced glutaredoxin from chlorella2 sorokiniana t-89 in complex with glutathione
6c2v5iA_



32.2 64
PDB header:viral protein
Chain: A: PDB Molecule:salmonella typhimurium db7155 bacteriophage det7 tailspike;
PDBTitle: structure of the receptor-binding protein of bacteriophage det7: a2 podoviral tailspike in a myovirus
7c1x31D_



30.0 17
PDB header:oxidoreductase
Chain: D: PDB Molecule:sarcosine oxidase delta subunit;
PDBTitle: crystal structure of heterotetrameric sarcosine oxidase from2 corynebacterium sp. u-96
8d1nnqa2



26.8 35
Fold:Rubredoxin-like
Superfamily:Rubredoxin-like
Family:Rubredoxin
9c4iloA_



25.5 31
PDB header:unknown function
Chain: A: PDB Molecule:ct398;
PDBTitle: 2.12a resolution structure of ct398 from chlamydia trachomatis
10c1x4jA_



24.1 26
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:ring finger protein 38;
PDBTitle: solution structure of ring finger in ring finger protein 38
11c2in3A_



23.9 43
PDB header:isomerase
Chain: A: PDB Molecule:hypothetical protein;
PDBTitle: crystal structure of a putative protein disulfide isomerase from2 nitrosomonas europaea
12d2ct1a1



23.3 27
Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
13c3kzqE_



21.9 43
PDB header:structural genomics, unknown function
Chain: E: PDB Molecule:putative uncharacterized protein vp2116;
PDBTitle: the crystal structure of the protein with unknown function from vibrio2 parahaemolyticus rimd 2210633
14d1lkoa2



21.4 23
Fold:Rubredoxin-like
Superfamily:Rubredoxin-like
Family:Rubredoxin
15c6ifnA_



21.3 13
PDB header:rna binding protein
Chain: A: PDB Molecule:type iii-a crispr-associated protein csm1;
PDBTitle: crystal structure of type iii-a crispr csm complex
16c3mhvC_



20.7 17
PDB header:protein transport
Chain: C: PDB Molecule:vacuolar protein sorting-associated protein 4;
PDBTitle: crystal structure of vps4 and vta1
17d2fc7a1



20.3 17
Fold:RING/U-box
Superfamily:RING/U-box
Family:ZZ domain
18c6ghbB_



20.2 43
PDB header:protein binding
Chain: B: PDB Molecule:upf0413 protein gk0824;
PDBTitle: crystal structure of spx in complex with yjbh (oxidized)
19c3vlfB_



20.1 31
PDB header:chaperone/protein binding
Chain: B: PDB Molecule:26s protease regulatory subunit 7 homolog;
PDBTitle: crystal structure of yeast proteasome interacting protein
20c2dzoD_



19.9 15
PDB header:protein binding
Chain: D: PDB Molecule:26s protease regulatory subunit 6b homolog;
PDBTitle: crystal structure analysis of yeast nas6p complexed with2 the proteasome subunit, rpt3
21c6ghcA_



not modelled 19.8 22
PDB header:hydrolase
Chain: A: PDB Molecule:5-methylcytosine-specific restriction enzyme a;
PDBTitle: modification dependent ecokmcra restriction endonuclease
22d1ivma_



not modelled 19.5 25
Fold:Lysozyme-like
Superfamily:Lysozyme-like
Family:C-type lysozyme
23c4qf3A_



not modelled 19.4 24
PDB header:transcription
Chain: A: PDB Molecule:bromodomain adjacent to zinc finger domain protein 2b;
PDBTitle: crystal structure of human baz2b phd zinc finger in the free form
24d2ct7a1



not modelled 19.3 26
Fold:RING/U-box
Superfamily:RING/U-box
Family:IBR domain
25d1qqya_



not modelled 18.9 25
Fold:Lysozyme-like
Superfamily:Lysozyme-like
Family:C-type lysozyme
26c2dvwB_



not modelled 18.8 23
PDB header:cell cycle/protein-binding
Chain: B: PDB Molecule:26s protease regulatory subunit 6b;
PDBTitle: structure of the oncoprotein gankyrin in complex with s62 atpase of the 26s proteasome
27c2mygA_



not modelled 18.3 15
PDB header:oxidoreductase
Chain: A: PDB Molecule:dithiol glutaredoxin 1;
PDBTitle: solution structure of the dithiolic glutaredoxin 2-c-grx1 from the2 pathogen trypanosoma brucei brucei
28c4uznA_



not modelled 18.2 28
PDB header:hydrolase
Chain: A: PDB Molecule:endo-beta-1,4-glucanase (celulase b);
PDBTitle: the native structure of the family 46 carbohydrate-binding2 module (cbm46) of endo-beta-1,4-glucanase b (cel5b) from3 bacillus halodurans
29c2mvwA_



not modelled 17.9 23
PDB header:metal binding protein
Chain: A: PDB Molecule:protein pml;
PDBTitle: solution structure of the trim19 b-box1 (b1) of human promyelocytic2 leukemia (pml)
30d2nwdx1



not modelled 17.4 22
Fold:Lysozyme-like
Superfamily:Lysozyme-like
Family:C-type lysozyme
31c5gtxA_



not modelled 17.4 14
PDB header:oxidoreductase
Chain: A: PDB Molecule:buckwheat glutaredoxin;
PDBTitle: crystal structure of mutated buckwheat glutaredoxin
32c3qmxA_



not modelled 17.2 19
PDB header:electron transport
Chain: A: PDB Molecule:glutaredoxin a;
PDBTitle: x-ray crystal structure of synechocystis sp. pcc 6803 glutaredoxin a
33d1juga_



not modelled 17.1 26
Fold:Lysozyme-like
Superfamily:Lysozyme-like
Family:C-type lysozyme
34c2m13A_



not modelled 17.0 22
PDB header:metal binding protein
Chain: A: PDB Molecule:cytoplasmic polyadenylation element-binding protein 1;
PDBTitle: the zz domain of cytoplasmic polyadenylation element binding protein 12 (cpeb1)
35c2e6rA_



not modelled 17.0 24
PDB header:dna binding protein
Chain: A: PDB Molecule:jumonji/arid domain-containing protein 1d;
PDBTitle: solution structure of the phd domain in smcy protein
36c5hfiA_



not modelled 16.7 14
PDB header:oxidoreductase
Chain: A: PDB Molecule:uncharacterized protein, cytosolic disulfide reductase
PDBTitle: cytosolic disulfide reductase dsbm from pseudomonas aeruginosa with2 gsh
37d1gd6a_



not modelled 16.5 24
Fold:Lysozyme-like
Superfamily:Lysozyme-like
Family:C-type lysozyme
38d1lsga1



not modelled 16.3 19
Fold:Lysozyme-like
Superfamily:Lysozyme-like
Family:C-type lysozyme
39d2eqla_



not modelled 16.2 22
Fold:Lysozyme-like
Superfamily:Lysozyme-like
Family:C-type lysozyme
40d2ctda2



not modelled 16.0 44
Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
41d1dx8a_



not modelled 16.0 31
Fold:Rubredoxin-like
Superfamily:Rubredoxin-like
Family:Rubredoxin
42d1dfxa2



not modelled 15.6 27
Fold:Rubredoxin-like
Superfamily:Rubredoxin-like
Family:Desulforedoxin
43c3gl5A_



not modelled 15.5 57
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative dsba oxidoreductase sco1869;
PDBTitle: crystal structure of probable dsba oxidoreductase sco1869 from2 streptomyces coelicolor
44d2gzoa1



not modelled 15.2 27
Fold:VC0467-like
Superfamily:VC0467-like
Family:VC0467-like
45d1fkqa_



not modelled 15.2 24
Fold:Lysozyme-like
Superfamily:Lysozyme-like
Family:C-type lysozyme
46c2lvhA_



not modelled 15.2 50
PDB header:metal binding protein
Chain: A: PDB Molecule:putative zinc finger protein orf59a;
PDBTitle: solution structure of the zinc finger afv1p06 protein from the2 hyperthermophilic archaeal virus afv1
47c5x1hS_



not modelled 15.0 16
PDB header:protein transport
Chain: S: PDB Molecule:icmj (dotn);
PDBTitle: structure of legionella pneumophila dotn
48c6j6qF_



not modelled 14.5 40
PDB header:splicing
Chain: F: PDB Molecule:splicing factor yju2;
PDBTitle: cryo-em structure of the yeast b*-b2 complex at an average resolution2 of 3.7 angstrom
49c2goiC_



not modelled 14.3 26
PDB header:cell adhesion, sugar binding protein
Chain: C: PDB Molecule:sperm lysozyme-like protein 1;
PDBTitle: crystal structure of mouse sperm c-type lysozyme-like protein 1
50c5lj3D_



not modelled 14.3 40
PDB header:splicing
Chain: D: PDB Molecule:protein cwc16;
PDBTitle: structure of the core of the yeast spliceosome immediately after2 branching
51d1yuza2



not modelled 14.1 27
Fold:Rubredoxin-like
Superfamily:Rubredoxin-like
Family:Rubredoxin
52c2yt5A_



not modelled 13.8 20
PDB header:transcription
Chain: A: PDB Molecule:metal-response element-binding transcription
PDBTitle: solution structure of the phd domain of metal-response2 element-binding transcription factor 2
53c3riqA_



not modelled 13.8 25
PDB header:viral protein
Chain: A: PDB Molecule:tailspike protein;
PDBTitle: siphovirus 9na tailspike receptor binding domain
54c1rimA_



not modelled 13.8 40
PDB header:de novo protein
Chain: A: PDB Molecule:e6apc2 peptide;
PDBTitle: e6-binding zinc finger (e6apc2)
55c3uiwB_



not modelled 13.5 18
PDB header:oxidoreductase
Chain: B: PDB Molecule:glutaredoxin 2;
PDBTitle: zebrafish grx2 (apo)
56c5jpxA_



not modelled 13.4 20
PDB header:metal binding protein
Chain: A: PDB Molecule:e3 ubiquitin-protein ligase trim21;
PDBTitle: solution structure of the trim21 b-box2 (b2)
57d1ghla_



not modelled 13.2 23
Fold:Lysozyme-like
Superfamily:Lysozyme-like
Family:C-type lysozyme
58c5xzsA_



not modelled 13.0 15
PDB header:transcription
Chain: A: PDB Molecule:histone acetyltransferase p300;
PDBTitle: cryo-em structure of p300
59d1f6sa_



not modelled 13.0 22
Fold:Lysozyme-like
Superfamily:Lysozyme-like
Family:C-type lysozyme
60c1rikA_



not modelled 12.8 40
PDB header:de novo protein
Chain: A: PDB Molecule:e6apc1 peptide;
PDBTitle: e6-binding zinc finger (e6apc1)
61c2e5rA_



not modelled 12.8 22
PDB header:dna binding protein
Chain: A: PDB Molecule:dystrobrevin alpha;
PDBTitle: solution structure of the zz domain of dystrobrevin alpha2 (dystrobrevin-alpha)
62d1h7va_



not modelled 12.7 31
Fold:Rubredoxin-like
Superfamily:Rubredoxin-like
Family:Rubredoxin
63d1ibia2



not modelled 12.6 63
Fold:Glucocorticoid receptor-like (DNA-binding domain)
Superfamily:Glucocorticoid receptor-like (DNA-binding domain)
Family:LIM domain
64c2z2fA_



not modelled 12.5 26
PDB header:hydrolase
Chain: A: PDB Molecule:lysozyme c-2;
PDBTitle: x-ray crystal structure of bovine stomach lysozyme
65c2v3bB_



not modelled 12.5 22
PDB header:oxidoreductase
Chain: B: PDB Molecule:rubredoxin 2;
PDBTitle: crystal structure of the electron transfer complex rubredoxin -2 rubredoxin reductase from pseudomonas aeruginosa.
66d1rb9a_



not modelled 12.4 31
Fold:Rubredoxin-like
Superfamily:Rubredoxin-like
Family:Rubredoxin
67c3gmfA_



not modelled 12.1 43
PDB header:oxidoreductase
Chain: A: PDB Molecule:protein-disulfide isomerase;
PDBTitle: crystal structure of protein-disulfide isomerase from novosphingobium2 aromaticivorans
68d1iiza_



not modelled 12.1 26
Fold:Lysozyme-like
Superfamily:Lysozyme-like
Family:C-type lysozyme
69d1wena_



not modelled 12.0 12
Fold:FYVE/PHD zinc finger
Superfamily:FYVE/PHD zinc finger
Family:PHD domain
70c2lzeA_



not modelled 11.7 14
PDB header:de novo protein
Chain: A: PDB Molecule:a primordial catalytic fold generated by in vitro
PDBTitle: ligase 10c
71c2klxA_



not modelled 11.7 18
PDB header:oxidoreductase
Chain: A: PDB Molecule:glutaredoxin;
PDBTitle: solution structure of glutaredoxin from bartonella henselae str.2 houston
72d2rdva_



not modelled 11.7 31
Fold:Rubredoxin-like
Superfamily:Rubredoxin-like
Family:Rubredoxin
73c5wakB_



not modelled 11.6 50
PDB header:transcription
Chain: B: PDB Molecule:polycomb protein suz12;
PDBTitle: crystal structure of a suz12-rbbp4 binary complex
74c2jm1A_



not modelled 11.5 28
PDB header:metal binding protein
Chain: A: PDB Molecule:transcriptional regulator atrx;
PDBTitle: structures and chemical shift assignments for the add domain of the2 atrx protein
75d1iu5a_



not modelled 11.5 35
Fold:Rubredoxin-like
Superfamily:Rubredoxin-like
Family:Rubredoxin
76c2imeA_



not modelled 11.5 14
PDB header:transferase
Chain: A: PDB Molecule:2-hydroxychromene-2-carboxylate isomerase;
PDBTitle: 2-hydroxychromene-2-carboxylate isomerase: a kappa class glutathione-2 s-transferase from pseudomonas putida
77c1yzxB_



not modelled 10.9 14
PDB header:transferase
Chain: B: PDB Molecule:glutathione s-transferase kappa 1;
PDBTitle: crystal structure of human kappa class glutathione transferase
78c1yuzB_



not modelled 10.7 37
PDB header:oxidoreductase
Chain: B: PDB Molecule:nigerythrin;
PDBTitle: partially reduced state of nigerythrin
79d6rxna_



not modelled 10.6 24
Fold:Rubredoxin-like
Superfamily:Rubredoxin-like
Family:Rubredoxin
80c3gn5B_



not modelled 10.5 30
PDB header:dna binding protein
Chain: B: PDB Molecule:hth-type transcriptional regulator mqsa (ygit/b3021);
PDBTitle: structure of the e. coli protein mqsa (ygit/b3021)
81c5cohA_



not modelled 10.4 57
PDB header:oxidoreductase
Chain: A: PDB Molecule:frne protein;
PDBTitle: crystal structure of a novel disulfide oxidoreductase from deinococcus2 radiodurans crystallized in presence of beta-mercaptoethanol
82c6c24A_



not modelled 10.3 50
PDB header:gene regulation
Chain: A: PDB Molecule:polycomb protein suz12;
PDBTitle: cryo-em structure of prc2 bound to cofactors aebp2 and jarid2 in the2 extended active state
83c2k5cA_



not modelled 10.2 18
PDB header:metal binding protein
Chain: A: PDB Molecule:uncharacterized protein pf0385;
PDBTitle: nmr structure for pf0385
84d1x68a1



not modelled 10.2 23
Fold:Glucocorticoid receptor-like (DNA-binding domain)
Superfamily:Glucocorticoid receptor-like (DNA-binding domain)
Family:LIM domain
85c2hr5B_



not modelled 10.2 11
PDB header:metal binding protein
Chain: B: PDB Molecule:rubrerythrin;
PDBTitle: pf1283- rubrerythrin from pyrococcus furiosus iron bound form
86c3mjhD_



not modelled 10.1 33
PDB header:protein transport
Chain: D: PDB Molecule:early endosome antigen 1;
PDBTitle: crystal structure of human rab5a in complex with the c2h2 zinc finger2 of eea1
87d1hhla_



not modelled 10.1 19
Fold:Lysozyme-like
Superfamily:Lysozyme-like
Family:C-type lysozyme
88c2m4yA_



not modelled 10.0 28
PDB header:electron transport
Chain: A: PDB Molecule:rubredoxin;
PDBTitle: rubredoxin type protein from mycobacterium ulcerans
89c2fe8B_



not modelled 9.9 21
PDB header:hydrolase
Chain: B: PDB Molecule:replicase polyprotein 1ab;
PDBTitle: sars coronavirus papain-like protease: structure of a viral2 deubiquitinating enzyme
90d1r4wa_



not modelled 9.8 14
Fold:Thioredoxin fold
Superfamily:Thioredoxin-like
Family:DsbA-like
91d1vzia2



not modelled 9.5 27
Fold:Rubredoxin-like
Superfamily:Rubredoxin-like
Family:Desulforedoxin
92c2mnyA_



not modelled 9.4 21
PDB header:oxidoreductase
Chain: A: PDB Molecule:lysine-specific demethylase 5b;
PDBTitle: nmr structure of kdm5b phd1 finger
93c1freA_



not modelled 9.4 15
PDB header:zinc-binding protein
Chain: A: PDB Molecule:nuclear factor xnf7;
PDBTitle: xnf7 bbox, developmental protein, ph 7.5, 30 c, with zinc,2 nmr, 1 structure
94c3fz5C_



not modelled 9.4 0
PDB header:isomerase
Chain: C: PDB Molecule:possible 2-hydroxychromene-2-carboxylate isomerase;
PDBTitle: crystal structure of possible 2-hydroxychromene-2-carboxylate2 isomerase from rhodobacter sphaeroides
95c3c7mB_



not modelled 9.4 43
PDB header:oxidoreductase
Chain: B: PDB Molecule:thiol:disulfide interchange protein dsba-like;
PDBTitle: crystal structure of reduced dsbl
96c3gn3B_



not modelled 9.3 43
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:putative protein-disulfide isomerase;
PDBTitle: crystal structure of a putative protein-disulfide isomerase from2 pseudomonas syringae to 2.5a resolution.
97c3alrA_



not modelled 9.1 43
PDB header:metal binding protein
Chain: A: PDB Molecule:nanos protein;
PDBTitle: crystal structure of nanos
98c2wwaJ_



not modelled 9.0 18
PDB header:ribosome
Chain: J: PDB Molecule:60s ribosomal protein l19;
PDBTitle: cryo-em structure of idle yeast ssh1 complex bound to the yeast 80s2 ribosome
99c2aklA_



not modelled 9.0 28
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:phna-like protein pa0128;
PDBTitle: solution structure for phn-a like protein pa0128 from2 pseudomonas aeruginosa

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