Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2307B_(-)_2579514_2579945
DateMon Aug 5 13:25:45 BST 2019
Unique Job IDcb084d6e67c89c12
SequenceVEEVPTGPPA ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:25.590 Y:27.130 Z:31.648
Model (left) based on template c5xnwA_
Top template information
PDB header:lyase
Chain: A: PDB Molecule:adenylate cyclase exoy;
PDBTitle: crystal structure of exoy, a unique nucleotidyl cyclase toxin from2 pseudomonas aeruginosa
Confidence and coverage
Confidence: 37.5% Coverage: 15%
22 residues ( 15% of your sequence) have been modelled with 37.5% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c5xnwA_



37.5 32
PDB header:lyase
Chain: A: PDB Molecule:adenylate cyclase exoy;
PDBTitle: crystal structure of exoy, a unique nucleotidyl cyclase toxin from2 pseudomonas aeruginosa
2c3zoqA_



35.1 57
PDB header:hydrolase/viral protein
Chain: A: PDB Molecule:uracil-dna glycosylase;
PDBTitle: structure of bsudg-p56 complex
3c5x3hA_



34.7 64
PDB header:dna binding protein
Chain: A: PDB Molecule:uracil-dna glycosylase;
PDBTitle: the y81g mutant of the ung crystal structure from nitratifractor2 salsuginis
4d1laue_



32.9 57
Fold:Uracil-DNA glycosylase-like
Superfamily:Uracil-DNA glycosylase-like
Family:Uracil-DNA glycosylase
5c3tr7A_



31.3 64
PDB header:hydrolase
Chain: A: PDB Molecule:uracil-dna glycosylase;
PDBTitle: structure of a uracil-dna glycosylase (ung) from coxiella burnetii
6d2hxma1



30.7 71
Fold:Uracil-DNA glycosylase-like
Superfamily:Uracil-DNA glycosylase-like
Family:Uracil-DNA glycosylase
7c2zhxG_



29.9 50
PDB header:hydrolase/hydrolase inhibitor
Chain: G: PDB Molecule:uracil-dna glycosylase;
PDBTitle: crystal structure of uracil-dna glycosylase from mycobacterium2 tuberculosis in complex with a proteinaceous inhibitor
8d3euga_



29.7 57
Fold:Uracil-DNA glycosylase-like
Superfamily:Uracil-DNA glycosylase-like
Family:Uracil-DNA glycosylase
9d1okba_



29.2 71
Fold:Uracil-DNA glycosylase-like
Superfamily:Uracil-DNA glycosylase-like
Family:Uracil-DNA glycosylase
10c3cxmA_



29.0 57
PDB header:hydrolase
Chain: A: PDB Molecule:uracil-dna glycosylase;
PDBTitle: leishmania naiffi uracil-dna glycosylase in complex with 5-bromouracil
11c2booA_



28.8 64
PDB header:hydrolase
Chain: A: PDB Molecule:uracil-dna glycosylase;
PDBTitle: the crystal structure of uracil-dna n-glycosylase (ung) from2 deinococcus radiodurans.
12c2uurA_



26.1 20
PDB header:structural protein
Chain: A: PDB Molecule:collagen alpha-1(ix) chain;
PDBTitle: n-terminal nc4 domain of collagen ix
13d1hn0a1



24.2 50
Fold:alpha/alpha toroid
Superfamily:Chondroitin AC/alginate lyase
Family:Hyaluronate lyase-like catalytic, N-terminal domain
14c5uj6A_



24.1 19
PDB header:hydrolase
Chain: A: PDB Molecule:glycosyl hydrolases family 2, sugar binding domain protein;
PDBTitle: crystal structure of bacteroides uniformis beta-glucuronidase
15c1u5mA_



20.7 43
PDB header:structural protein
Chain: A: PDB Molecule:alpha 1 type ii collagen isoform 1;
PDBTitle: structure of a chordin-like cysteine-rich repeat (vwc2 module) from collagen iia
16d1u5ma_



20.7 43
Fold:FnI-like domain
Superfamily:FnI-like domain
Family:VWC domain
17c2ahmG_



19.2 14
PDB header:viral protein, replication
Chain: G: PDB Molecule:replicase polyprotein 1ab, heavy chain;
PDBTitle: crystal structure of sars-cov super complex of non-structural2 proteins: the hexadecamer
18d2ahme1



18.9 14
Fold:Coronavirus NSP8-like
Superfamily:Coronavirus NSP8-like
Family:Coronavirus NSP8-like
19c3g7dA_



18.4 50
PDB header:biosynthetic protein
Chain: A: PDB Molecule:phpd;
PDBTitle: native phpd with cadmium atoms
20d2fc6a1



18.4 60
Fold:CCCH zinc finger
Superfamily:CCCH zinc finger
Family:CCCH zinc finger
21c4v19S_



not modelled 18.3 24
PDB header:ribosome
Chain: S: PDB Molecule:mitoribosomal protein ul18m, mrpl18;
PDBTitle: structure of the large subunit of the mammalian mitoribosome, part 12 of 2
22c3ub0D_



not modelled 18.2 21
PDB header:replication
Chain: D: PDB Molecule:non-structural protein 6, nsp6,;
PDBTitle: crystal structure of the nonstructural protein 7 and 8 complex of2 feline coronavirus
23d2j8xa1



not modelled 16.4 54
Fold:Uracil-DNA glycosylase-like
Superfamily:Uracil-DNA glycosylase-like
Family:Uracil-DNA glycosylase
24d1fjra_



not modelled 16.2 27
Fold:Methuselah ectodomain
Superfamily:Methuselah ectodomain
Family:Methuselah ectodomain
25d1uzdc1



not modelled 16.0 56
Fold:RuBisCO, small subunit
Superfamily:RuBisCO, small subunit
Family:RuBisCO, small subunit
26c1hn0A_



not modelled 16.0 50
PDB header:lyase
Chain: A: PDB Molecule:chondroitin abc lyase i;
PDBTitle: crystal structure of chondroitin abc lyase i from proteus vulgaris at2 1.9 angstroms resolution
27d1cwva5



not modelled 15.8 55
Fold:C-type lectin-like
Superfamily:C-type lectin-like
Family:Invasin/intimin cell-adhesion fragment, C-terminal domain
28c5nn7A_



not modelled 15.6 43
PDB header:hydrolase
Chain: A: PDB Molecule:uracil-dna glycosylase;
PDBTitle: kshv uracil-dna glycosylase, apo form
29d1ehda2



not modelled 15.4 50
Fold:Knottins (small inhibitors, toxins, lectins)
Superfamily:Plant lectins/antimicrobial peptides
Family:Hevein-like agglutinin (lectin) domain
30c2fc6A_



not modelled 15.1 60
PDB header:transcription
Chain: A: PDB Molecule:target of egr1, member 1;
PDBTitle: solution structure of the zf-ccch domain of target of egr1,2 member 1 (nuclear)
31c2owrD_



not modelled 14.8 38
PDB header:hydrolase
Chain: D: PDB Molecule:uracil-dna glycosylase;
PDBTitle: crystal structure of vaccinia virus uracil-dna glycosylase
32d8ruci_



not modelled 14.1 56
Fold:RuBisCO, small subunit
Superfamily:RuBisCO, small subunit
Family:RuBisCO, small subunit
33d2erfa1



not modelled 13.5 16
Fold:Concanavalin A-like lectins/glucanases
Superfamily:Concanavalin A-like lectins/glucanases
Family:Laminin G-like module
34c2q1fA_



not modelled 13.4 38
PDB header:lyase
Chain: A: PDB Molecule:chondroitinase;
PDBTitle: crystal structure of chondroitin sulfate lyase abc from bacteroides2 thetaiotaomicron wal2926
35d1ej7s_



not modelled 12.4 56
Fold:RuBisCO, small subunit
Superfamily:RuBisCO, small subunit
Family:RuBisCO, small subunit
36c2mfsA_



not modelled 11.8 40
PDB header:antimicrobial protein
Chain: A: PDB Molecule:ep-amp1;
PDBTitle: solution nmr structure of the cactus-derived antimicrobial peptide ep-2 amp1
37d1en2a2



not modelled 11.4 56
Fold:Knottins (small inhibitors, toxins, lectins)
Superfamily:Plant lectins/antimicrobial peptides
Family:Hevein-like agglutinin (lectin) domain
38c3asiA_



not modelled 11.4 33
PDB header:cell adhesion
Chain: A: PDB Molecule:neurexin-1-alpha;
PDBTitle: alpha-neurexin-1 ectodomain fragment; lns5-egf3-lns6
39c2qieA_



not modelled 11.3 44
PDB header:transferase
Chain: A: PDB Molecule:molybdopterin-converting factor subunit 2;
PDBTitle: staphylococcus aureus molybdopterin synthase in complex with precursor2 z
40d1t1ra3



not modelled 11.2 70
Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
41d1vcaa1



not modelled 11.0 30
Fold:Immunoglobulin-like beta-sandwich
Superfamily:Immunoglobulin
Family:C2 set domains
42d1pgsa2



not modelled 10.8 16
Fold:Nucleoplasmin-like/VP (viral coat and capsid proteins)
Superfamily:PHM/PNGase F
Family:Glycosyl-asparaginase
43d1vfsa1



not modelled 10.6 23
Fold:Domain of alpha and beta subunits of F1 ATP synthase-like
Superfamily:Alanine racemase C-terminal domain-like
Family:Alanine racemase
44d1a0ia1



not modelled 10.3 50
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:DNA ligase/mRNA capping enzyme postcatalytic domain
45c6hq8B_



not modelled 9.8 67
PDB header:hydrolase
Chain: B: PDB Molecule:beta-1,3-oligosaccharide phosphorylase;
PDBTitle: bacterial beta-1,3-oligosaccharide phosphorylase from gh149 with2 laminarihexaose bound at a surface site
46c5x55A_



not modelled 9.2 50
PDB header:hydrolase
Chain: A: PDB Molecule:probable uracil-dna glycosylase;
PDBTitle: crystal structure of mimivirus uracil-dna glycosylase
47d1ddza2



not modelled 8.7 25
Fold:Resolvase-like
Superfamily:beta-carbonic anhydrase, cab
Family:beta-carbonic anhydrase, cab
48d1x4ka2



not modelled 8.7 44
Fold:Glucocorticoid receptor-like (DNA-binding domain)
Superfamily:Glucocorticoid receptor-like (DNA-binding domain)
Family:LIM domain
49d1f60b_



not modelled 8.1 29
Fold:Ferredoxin-like
Superfamily:eEF-1beta-like
Family:eEF-1beta-like
50c1cb8A_



not modelled 7.8 38
PDB header:lyase
Chain: A: PDB Molecule:protein (chondroitinase ac);
PDBTitle: chondroitinase ac lyase from flavobacterium heparinum
51d1fm0e_



not modelled 7.7 33
Fold:alpha/beta-Hammerhead
Superfamily:Molybdopterin synthase subunit MoaE
Family:Molybdopterin synthase subunit MoaE
52d1j83a_



not modelled 7.6 29
Fold:Galactose-binding domain-like
Superfamily:Galactose-binding domain-like
Family:Family 17 carbohydrate binding module, CBM17
53c1oigA_



not modelled 7.5 50
PDB header:structural protein
Chain: A: PDB Molecule:dumpy, isoform y;
PDBTitle: the solution structure of the dpy module from the dumpy protein
54d1ir1s_



not modelled 7.5 56
Fold:RuBisCO, small subunit
Superfamily:RuBisCO, small subunit
Family:RuBisCO, small subunit
55c4e4fD_



not modelled 7.4 50
PDB header:isomerase
Chain: D: PDB Molecule:mannonate dehydratase;
PDBTitle: crystal structure of enolase pc1_0802 (target efi-502240) from2 pectobacterium carotovorum subsp. carotovorum pc1
56d1rcqa1



not modelled 7.3 30
Fold:Domain of alpha and beta subunits of F1 ATP synthase-like
Superfamily:Alanine racemase C-terminal domain-like
Family:Alanine racemase
57d1q3ja_



not modelled 7.3 43
Fold:Knottins (small inhibitors, toxins, lectins)
Superfamily:Gurmarin-like
Family:Antifungal peptide
58c1q3jA_



not modelled 7.3 43
PDB header:antifungal protein
Chain: A: PDB Molecule:alo3;
PDBTitle: solution structure of alo3: a new knottin-type antifungal peptide from2 the insect acrocinus longimanus
59d1ddza1



not modelled 7.1 25
Fold:Resolvase-like
Superfamily:beta-carbonic anhydrase, cab
Family:beta-carbonic anhydrase, cab
60c5wb5B_



not modelled 7.0 27
PDB header:translation
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: leishmania if4e-1 bound to leishmania 4e-ip1
61d1gh8a_



not modelled 6.9 29
Fold:Ferredoxin-like
Superfamily:eEF-1beta-like
Family:eEF-1beta-like
62c3kw3B_



not modelled 6.8 19
PDB header:isomerase
Chain: B: PDB Molecule:alanine racemase;
PDBTitle: crystal structure of alanine racemase from bartonella henselae with2 covalently bound pyridoxal phosphate
63c3v3wA_



not modelled 6.7 56
PDB header:lyase
Chain: A: PDB Molecule:starvation sensing protein rspa;
PDBTitle: crystal structure of an enolase from the soil bacterium cellvibrio2 japonicus (target efi-502161) with bound mg and glycerol
64d1prtb1



not modelled 6.5 63
Fold:OB-fold
Superfamily:Bacterial enterotoxins
Family:Bacterial AB5 toxins, B-subunits
65c3imkA_



not modelled 6.4 38
PDB header:metal binding protein
Chain: A: PDB Molecule:putative molybdenum carrier protein;
PDBTitle: crystal structure of putative molybdenum carrier protein (yp_461806.1)2 from syntrophus aciditrophicus sb at 1.45 a resolution
66d2cupa3



not modelled 6.4 29
Fold:Glucocorticoid receptor-like (DNA-binding domain)
Superfamily:Glucocorticoid receptor-like (DNA-binding domain)
Family:LIM domain
67c6rdu9_



not modelled 6.3 33
PDB header:proton transport
Chain: 9: PDB Molecule:asa-9: polytomella f-atp synthase associated subunit 9;
PDBTitle: cryo-em structure of polytomella f-atp synthase, rotary substate 1e,2 monomer-masked refinement
68c3tenD_



not modelled 6.3 25
PDB header:hydrolase
Chain: D: PDB Molecule:cs2 hydrolase;
PDBTitle: holo form of carbon disulfide hydrolase
69c3aaiB_



not modelled 6.1 12
PDB header:transcription
Chain: B: PDB Molecule:copper homeostasis operon regulatory protein;
PDBTitle: x-ray crystal structure of csor from thermus thermophilus hb8
70c1iq5B_



not modelled 6.0 67
PDB header:metal binding protein/protein binding
Chain: B: PDB Molecule:ca2+/calmodulin dependent kinase kinase;
PDBTitle: calmodulin/nematode ca2+/calmodulin dependent kinase kinase2 fragment
71c5g23A_



not modelled 6.0 38
PDB header:structural protein
Chain: A: PDB Molecule:type-iv like pilin ttha1219;
PDBTitle: type iv-like pilin ttha1219 from thermus thermophilus
72c1zuvA_



not modelled 5.9 53
PDB header:antimicrobial protein
Chain: A: PDB Molecule:amaranthus caudatus antimicrobial peptide 2;
PDBTitle: 24 nmr structures of acamp2-like peptide with phenylalanine2 18 mutated to tryptophan
73c6jbzC_



not modelled 5.9 33
PDB header:transferase
Chain: C: PDB Molecule:molybdenum cofactor biosynthesis protein e;
PDBTitle: structural analysis of molybdopterin synthases from two mycobacteria2 pathogens
74c2mijA_



not modelled 5.8 83
PDB header:antimicrobial protein
Chain: A: PDB Molecule:spbc2 prophage-derived bacteriocin sublancin-168;
PDBTitle: nmr structure of the s-linked glycopeptide sublancin 168
75d1v58a2



not modelled 5.7 35
Fold:Cystatin-like
Superfamily:DsbC/DsbG N-terminal domain-like
Family:DsbC/DsbG N-terminal domain-like
76c2mniA_



not modelled 5.6 35
PDB header:unknown function
Chain: A: PDB Molecule:hp_q4d059;
PDBTitle: chemical shift assignments and structure of q4d059, a hypothetical2 protein from trypanosoma cruzi
77c2c5dA_



not modelled 5.6 29
PDB header:signaling protein/receptor
Chain: A: PDB Molecule:growth-arrest-specific protein 6 precursor;
PDBTitle: structure of a minimal gas6-axl complex
78d2cupa1



not modelled 5.4 30
Fold:Glucocorticoid receptor-like (DNA-binding domain)
Superfamily:Glucocorticoid receptor-like (DNA-binding domain)
Family:LIM domain
79c2wjsA_



not modelled 5.4 40
PDB header:cell adhesion
Chain: A: PDB Molecule:laminin subunit alpha-2;
PDBTitle: crystal structure of the lg1-3 region of the laminin alpha22 chain
80d2fiya1



not modelled 5.4 19
Fold:FdhE-like
Superfamily:FdhE-like
Family:FdhE-like
81d2ixoa1



not modelled 5.3 27
Fold:PTPA-like
Superfamily:PTPA-like
Family:PTPA-like
82c3oiqB_



not modelled 5.3 34
PDB header:protein binding
Chain: B: PDB Molecule:dna polymerase alpha catalytic subunit a;
PDBTitle: crystal structure of yeast telomere protein cdc13 ob1 and the2 catalytic subunit of dna polymerase alpha pol1
83c4o1kA_



not modelled 5.2 28
PDB header:lyase
Chain: A: PDB Molecule:carbonic anhydrase;
PDBTitle: crystal structures of two tetrameric beta-carbonic anhydrases from the2 filamentous ascomycete sordaria macrospora.
84d1ic1a1



not modelled 5.2 43
Fold:Immunoglobulin-like beta-sandwich
Superfamily:Immunoglobulin
Family:C2 set domains
85c5efvC_



not modelled 5.1 27
PDB header:structural protein
Chain: C: PDB Molecule:phi eta orf 56-like protein;
PDBTitle: the host-recognition device of staphylococcus aureus phage phi11
86c3pmmA_



not modelled 5.0 25
PDB header:hydrolase
Chain: A: PDB Molecule:putative cytoplasmic protein;
PDBTitle: the crystal structure of a possible member of gh105 family from2 klebsiella pneumoniae subsp. pneumoniae mgh 78578

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