1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		L	A	T	S	S	D	D	I	T	I	N	R	H	P	P	L	N	C	A	V	N	R	H	D	E	S	R	R	S	P	L	R	R	G	L	L	A	N	G	L	R	E	R	Q	A	G	A	L	F	E	R	Y	E	S	Q	F	D	S	F	G
Secondary structure
SS confidence
Disorder		?	?	?	?	?	?	?														?	?	?	?	?	?	?	?	?								?	?	?					?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Sequence		Y	I	E	K	V	R	Y	R	G	S	G	Y	R	V	E	D	V	Y	A	R	A	D	S	G	P	S	A	G	A	E	L	P	V	G	P
Secondary structure
SS confidence
Disorder																					?		?	?	?	?	?	?	?	?	?	?	?	?	?	?
Disorder confidence

Confidence Key High(9)                     Low (0)

? Disordered ( 39%) Alpha helix ( 35%) Beta strand ( 21%)

Rank Aligned region

PDB 2htj chain A domain 1 Region: 27 - 46 Aligned: 20 Modelled: 20 Confidence: 56.4% Identity: 55% Fold: DNA/RNA-binding 3-helical bundle Superfamily: "Winged helix" DNA-binding domain Family: FaeA-like Phyre2 PDB 5mlq chain A Region: 9 - 59 Aligned: 47 Modelled: 51 Confidence: 27.5% Identity: 19% PDB header:ligase Chain: A: PDB Molecule:cdps; PDBTitle: structure of cdps from nocardia brasiliensis Phyre2 PDB 2v8s chain V Region: 48 - 56 Aligned: 9 Modelled: 9 Confidence: 19.0% Identity: 33% PDB header:protein transport Chain: V: PDB Molecule:vesicle transport through interaction with PDBTitle: vti1b habc domain - epsinr enth domain complex Phyre2 PDB 3onj chain A Region: 47 - 56 Aligned: 10 Modelled: 10 Confidence: 17.7% Identity: 50% PDB header:protein transport Chain: A: PDB Molecule:t-snare vti1; PDBTitle: crystal structure of yeast vti1p_habc domain Phyre2 PDB 3uc7 chain E Region: 81 - 94 Aligned: 14 Modelled: 14 Confidence: 12.5% Identity: 57% PDB header:de novo protein Chain: E: PDB Molecule:cyclo-tc1; PDBTitle: trp-cage cyclo-tc1 - monoclinic crystal form Phyre2 PDB 1gk7 chain A Region: 60 - 67 Aligned: 8 Modelled: 8 Confidence: 12.4% Identity: 63% PDB header:vimentin Chain: A: PDB Molecule:vimentin; PDBTitle: human vimentin coil 1a fragment (1a) Phyre2 PDB 3uc8 chain C Region: 81 - 94 Aligned: 14 Modelled: 14 Confidence: 12.3% Identity: 57% PDB header:de novo protein Chain: C: PDB Molecule:cyclo-tc1; PDBTitle: trp-cage cyclo-tc1 - tetragonal crystal form Phyre2 PDB 3uc7 chain A Region: 81 - 94 Aligned: 14 Modelled: 14 Confidence: 12.3% Identity: 57% PDB header:de novo protein Chain: A: PDB Molecule:cyclo-tc1; PDBTitle: trp-cage cyclo-tc1 - monoclinic crystal form Phyre2 PDB 3uc8 chain B Region: 81 - 94 Aligned: 14 Modelled: 14 Confidence: 12.3% Identity: 57% PDB header:de novo protein Chain: B: PDB Molecule:cyclo-tc1; PDBTitle: trp-cage cyclo-tc1 - tetragonal crystal form Phyre2 PDB 3uc7 chain D Region: 81 - 94 Aligned: 14 Modelled: 14 Confidence: 12.3% Identity: 57% PDB header:de novo protein Chain: D: PDB Molecule:cyclo-tc1; PDBTitle: trp-cage cyclo-tc1 - monoclinic crystal form Phyre2 PDB 2ll5 chain A Region: 81 - 94 Aligned: 14 Modelled: 14 Confidence: 12.3% Identity: 57% PDB header:de novo protein Chain: A: PDB Molecule:cyclo-tc1; PDBTitle: cyclo-tc1 trp-cage Phyre2 PDB 3uc8 chain A Region: 81 - 94 Aligned: 14 Modelled: 14 Confidence: 12.3% Identity: 57% PDB header:de novo protein Chain: A: PDB Molecule:cyclo-tc1; PDBTitle: trp-cage cyclo-tc1 - tetragonal crystal form Phyre2 PDB 3uc7 chain C Region: 81 - 94 Aligned: 14 Modelled: 14 Confidence: 12.3% Identity: 57% PDB header:de novo protein Chain: C: PDB Molecule:cyclo-tc1; PDBTitle: trp-cage cyclo-tc1 - monoclinic crystal form Phyre2 PDB 3uc7 chain F Region: 81 - 94 Aligned: 14 Modelled: 14 Confidence: 12.3% Identity: 57% PDB header:de novo protein Chain: F: PDB Molecule:cyclo-tc1; PDBTitle: trp-cage cyclo-tc1 - monoclinic crystal form Phyre2 PDB 3uc7 chain B Region: 81 - 94 Aligned: 14 Modelled: 14 Confidence: 12.3% Identity: 57% PDB header:de novo protein Chain: B: PDB Molecule:cyclo-tc1; PDBTitle: trp-cage cyclo-tc1 - monoclinic crystal form Phyre2 PDB 1z0p chain A domain 1 Region: 44 - 62 Aligned: 19 Modelled: 19 Confidence: 12.0% Identity: 37% Fold: Long alpha-hairpin Superfamily: SPy1572-like Family: SPy1572-like Phyre2 PDB 6ivs chain A Region: 1 - 16 Aligned: 16 Modelled: 16 Confidence: 9.8% Identity: 19% PDB header:transcription Chain: A: PDB Molecule:anti-sigma-i factor rsgi1; PDBTitle: solution structure of the n-terminal domain of the anti-sigma factor2 rsgi1 from clostridium thermocellum Phyre2 PDB 4x01 chain D Region: 43 - 53 Aligned: 11 Modelled: 11 Confidence: 9.5% Identity: 64% PDB header:dna binding protein Chain: D: PDB Molecule:dna binding ctp1; PDBTitle: s. pombe ctp1 tetramerization domain Phyre2 PDB 3e9v chain A domain 1 Region: 37 - 73 Aligned: 32 Modelled: 37 Confidence: 8.9% Identity: 31% Fold: BTG domain-like Superfamily: BTG domain-like Family: BTG domain-like Phyre2 PDB 1ew4 chain A Region: 8 - 17 Aligned: 10 Modelled: 10 Confidence: 8.3% Identity: 60% Fold: N domain of copper amine oxidase-like Superfamily: Frataxin/Nqo15-like Family: Frataxin-like Phyre2 1 d2htja1 2 c5mlqA_ 3 c2v8sV_ 4 c3onjA_ 5 c3uc7E_ 6 c1gk7A_ 7 c3uc8C_ 8 c3uc7A_ 9 c3uc8B_ 10 c3uc7D_ 11 c2ll5A_ 12 c3uc8A_ 13 c3uc7C_ 14 c3uc7F_ 15 c3uc7B_ 16 d1z0pa1 17 c6ivsA_ 18 c4x01D_ 19 d3e9va1 20 d1ew4a_ 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45