1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.
Sequence		M	T	A	T	S	V	V	R	L	G	T	K	A	A	A	E	Y	L	G	G	L	P	E	S	T	L	R	Y	W	R	Y	W	A	P	V	R	A	A	I	A	L	A	D	T	R	F	A	I	S	P	T	W	M	R	G
Secondary structure
SS confidence
Disorder		?	?	?	?	?	?	?	?	?																																		?	?					?	?	?	?	?	?	?
Disorder confidence

Confidence Key High(9)                     Low (0)

? Disordered ( 33%) Alpha helix ( 75%) Beta strand ( 5%)

Rank Aligned region

PDB 6ama chain O Region: 9 - 29 Aligned: 20 Modelled: 21 Confidence: 35.3% Identity: 20% PDB header:dna binding protein/dna Chain: O: PDB Molecule:putative dna-binding protein; PDBTitle: structure of s. coelicolor/s. venezuelae bldc-smea-ssfa complex to2 3.09 angstrom Phyre2 PDB 2jml chain A Region: 20 - 29 Aligned: 10 Modelled: 10 Confidence: 32.9% Identity: 60% PDB header:transcription Chain: A: PDB Molecule:dna binding domain/transcriptional regulator; PDBTitle: solution structure of the n-terminal domain of cara repressor Phyre2 PDB 1r8d chain A Region: 20 - 29 Aligned: 10 Modelled: 10 Confidence: 31.5% Identity: 30% Fold: Putative DNA-binding domain Superfamily: Putative DNA-binding domain Family: DNA-binding N-terminal domain of transcription activators Phyre2 PDB 4r4e chain A Region: 20 - 30 Aligned: 11 Modelled: 11 Confidence: 31.2% Identity: 27% PDB header:transcription regulator/dna Chain: A: PDB Molecule:hth-type transcriptional regulator glnr; PDBTitle: structure of glnr-dna complex Phyre2 PDB 4r24 chain B Region: 20 - 29 Aligned: 10 Modelled: 10 Confidence: 30.9% Identity: 50% PDB header:transcrption/dna Chain: B: PDB Molecule:hth-type transcriptional regulator tnra; PDBTitle: complete dissection of b. subtilis nitrogen homeostatic circuitry Phyre2 PDB 2vz4 chain A Region: 20 - 29 Aligned: 10 Modelled: 10 Confidence: 30.6% Identity: 30% PDB header:transcription Chain: A: PDB Molecule:hth-type transcriptional activator tipa; PDBTitle: the n-terminal domain of merr-like protein tipal bound to promoter dna Phyre2 PDB 1q06 chain A Region: 20 - 29 Aligned: 10 Modelled: 10 Confidence: 29.9% Identity: 30% Fold: Putative DNA-binding domain Superfamily: Putative DNA-binding domain Family: DNA-binding N-terminal domain of transcription activators Phyre2 PDB 4jjj chain A Region: 12 - 43 Aligned: 32 Modelled: 32 Confidence: 29.7% Identity: 28% PDB header:hydrolase Chain: A: PDB Molecule:cellulose 1,4-beta-cellobiosidase; PDBTitle: the structure of t. fusca gh48 d224n mutant Phyre2 PDB 1l1y chain A Region: 16 - 43 Aligned: 28 Modelled: 28 Confidence: 29.2% Identity: 25% Fold: alpha/alpha toroid Superfamily: Six-hairpin glycosidases Family: Cellulases catalytic domain Phyre2 PDB 4fus chain A Region: 12 - 43 Aligned: 32 Modelled: 32 Confidence: 28.6% Identity: 31% PDB header:hydrolase Chain: A: PDB Molecule:rtx toxins and related ca2+-binding protein; PDBTitle: the x-ray structure of hahella chejuensis family 48 glycosyl hydrolase Phyre2 PDB 4el8 chain A Region: 12 - 43 Aligned: 31 Modelled: 32 Confidence: 27.7% Identity: 42% PDB header:hydrolase Chain: A: PDB Molecule:glycoside hydrolase family 48; PDBTitle: the unliganded structure of c.bescii cela gh48 module Phyre2 PDB 2cob chain A domain 1 Region: 12 - 29 Aligned: 16 Modelled: 18 Confidence: 27.6% Identity: 56% Fold: DNA/RNA-binding 3-helical bundle Superfamily: Homeodomain-like Family: Psq domain Phyre2 PDB 1l2a chain D Region: 16 - 43 Aligned: 28 Modelled: 28 Confidence: 26.1% Identity: 25% PDB header:hydrolase Chain: D: PDB Molecule:cellobiohydrolase; PDBTitle: the crystal structure and catalytic mechanism of2 cellobiohydrolase cels, the major enzymatic component of3 the clostridium thermocellum cellulosome Phyre2 PDB 5c8e chain C Region: 20 - 29 Aligned: 10 Modelled: 10 Confidence: 22.7% Identity: 50% PDB header:transcription regulator/dna Chain: C: PDB Molecule:light-dependent transcriptional regulator carh; PDBTitle: crystal structure of thermus thermophilus carh bound to2 adenosylcobalamin and a 26-bp dna segment Phyre2 PDB 1g9g chain A Region: 12 - 43 Aligned: 32 Modelled: 32 Confidence: 22.0% Identity: 25% Fold: alpha/alpha toroid Superfamily: Six-hairpin glycosidases Family: Cellulases catalytic domain Phyre2 PDB 2zhh chain A Region: 20 - 29 Aligned: 10 Modelled: 10 Confidence: 21.7% Identity: 30% PDB header:transcription Chain: A: PDB Molecule:redox-sensitive transcriptional activator soxr; PDBTitle: crystal structure of soxr Phyre2 PDB 3gp4 chain B Region: 20 - 29 Aligned: 10 Modelled: 10 Confidence: 21.3% Identity: 40% PDB header:transcription regulator Chain: B: PDB Molecule:transcriptional regulator, merr family; PDBTitle: crystal structure of putative merr family transcriptional regulator2 from listeria monocytogenes Phyre2 PDB 1r8e chain A domain 1 Region: 20 - 29 Aligned: 10 Modelled: 10 Confidence: 19.7% Identity: 30% Fold: Putative DNA-binding domain Superfamily: Putative DNA-binding domain Family: DNA-binding N-terminal domain of transcription activators Phyre2 PDB 5i44 chain E Region: 20 - 29 Aligned: 10 Modelled: 10 Confidence: 18.7% Identity: 30% PDB header:dna binding protein/dna Chain: E: PDB Molecule:chromosome-anchoring protein raca; PDBTitle: structure of raca-dna complex; p21 form Phyre2 PDB 3qao chain A Region: 20 - 29 Aligned: 10 Modelled: 10 Confidence: 17.3% Identity: 30% PDB header:transcription regulator Chain: A: PDB Molecule:merr-like transcriptional regulator; PDBTitle: the crystal structure of the n-terminal domain of a merr-like2 transcriptional regulator from listeria monocytogenes egd-e Phyre2 1 c6amaO_ 2 c2jmlA_ 3 d1r8da_ 4 c4r4eA_ 5 c4r24B_ 6 c2vz4A_ 7 d1q06a_ 8 c4jjjA_ 9 d1l1ya_ 10 c4fusA_ 11 c4el8A_ 12 d2coba1 13 c1l2aD_ 14 c5c8eC_ 15 d1g9ga_ 16 c2zhhA_ 17 c3gp4B_ 18 d1r8ea1 19 c5i44E_ 20 c3qaoA_ 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46