Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2310_(-)_2583445_2583789
DateMon Aug 5 13:25:46 BST 2019
Unique Job IDc78e3205e6f684a3
SequenceVVAALHAGKA ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:22.022 Y:27.392 Z:29.760
Model (left) based on template c4j2nA_
Top template information
PDB header:viral protein
Chain: A: PDB Molecule:gp37;
PDBTitle: crystal structure of mycobacteriophage pukovnik xis
Confidence and coverage
Confidence: 99.2% Coverage: 44%
50 residues ( 44% of your sequence) have been modelled with 99.2% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
98 residues ( 86%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
3D viewing
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c4j2nA_
99.2 40
PDB header:viral protein
Chain: A: PDB Molecule:gp37;
PDBTitle: crystal structure of mycobacteriophage pukovnik xis
2c4j2nB_
99.2 40
PDB header:viral protein
Chain: B: PDB Molecule:gp37;
PDBTitle: crystal structure of mycobacteriophage pukovnik xis
3c6amaO_
98.8 30
PDB header:dna binding protein/dna
Chain: O: PDB Molecule:putative dna-binding protein;
PDBTitle: structure of s. coelicolor/s. venezuelae bldc-smea-ssfa complex to2 3.09 angstrom
4c1z4hA_
98.6 20
PDB header:protein binding, dna binding protein
Chain: A: PDB Molecule:tor inhibition protein;
PDBTitle: the response regulator tori belongs to a new family of2 atypical excisionase
5c2zhhA_
98.2 17
PDB header:transcription
Chain: A: PDB Molecule:redox-sensitive transcriptional activator soxr;
PDBTitle: crystal structure of soxr
6c1y6uA_
98.0 17
PDB header:dna binding protein
Chain: A: PDB Molecule:excisionase from transposon tn916;
PDBTitle: the structure of the excisionase (xis) protein from2 conjugative transposon tn916 provides insights into the3 regulation of heterobivalent tyrosine recombinases
7c5c8eC_
97.7 16
PDB header:transcription regulator/dna
Chain: C: PDB Molecule:light-dependent transcriptional regulator carh;
PDBTitle: crystal structure of thermus thermophilus carh bound to2 adenosylcobalamin and a 26-bp dna segment
8c5i44E_
97.7 32
PDB header:dna binding protein/dna
Chain: E: PDB Molecule:chromosome-anchoring protein raca;
PDBTitle: structure of raca-dna complex; p21 form
9c2kfsA_
97.7 26
PDB header:dna-binding protein
Chain: A: PDB Molecule:conserved hypothetical regulatory protein;
PDBTitle: nmr structure of rv2175c
10c4r24B_
97.6 16
PDB header:transcrption/dna
Chain: B: PDB Molecule:hth-type transcriptional regulator tnra;
PDBTitle: complete dissection of b. subtilis nitrogen homeostatic circuitry
11c2vz4A_
97.6 18
PDB header:transcription
Chain: A: PDB Molecule:hth-type transcriptional activator tipa;
PDBTitle: the n-terminal domain of merr-like protein tipal bound to promoter dna
12c4r4eA_
97.5 19
PDB header:transcription regulator/dna
Chain: A: PDB Molecule:hth-type transcriptional regulator glnr;
PDBTitle: structure of glnr-dna complex
13c3ucsB_
97.5 15
PDB header:chaperone
Chain: B: PDB Molecule:chaperone-modulator protein cbpm;
PDBTitle: crystal structure of the complex between cbpa j-domain and cbpm
14c3gpvA_
97.4 9
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator, merr family;
PDBTitle: crystal structure of a transcriptional regulator, merr2 family from bacillus thuringiensis
15d1r8da_
97.3 14
Fold:Putative DNA-binding domain
Superfamily:Putative DNA-binding domain
Family:DNA-binding N-terminal domain of transcription activators
16d1q06a_
97.3 9
Fold:Putative DNA-binding domain
Superfamily:Putative DNA-binding domain
Family:DNA-binding N-terminal domain of transcription activators
17c5af3A_
97.2 19
PDB header:dna binding
Chain: A: PDB Molecule:vapbc49;
PDBTitle: x-ray crystal structure of rv2018 from mycobacterium tuberculosis
18c3gp4B_
97.2 18
PDB header:transcription regulator
Chain: B: PDB Molecule:transcriptional regulator, merr family;
PDBTitle: crystal structure of putative merr family transcriptional regulator2 from listeria monocytogenes
19d1r8ea1
97.2 12
Fold:Putative DNA-binding domain
Superfamily:Putative DNA-binding domain
Family:DNA-binding N-terminal domain of transcription activators
20c3qaoA_
96.9 16
PDB header:transcription regulator
Chain: A: PDB Molecule:merr-like transcriptional regulator;
PDBTitle: the crystal structure of the n-terminal domain of a merr-like2 transcriptional regulator from listeria monocytogenes egd-e
21c3hh0C_
not modelled 96.9 13
PDB header:transcription regulator
Chain: C: PDB Molecule:transcriptional regulator, merr family;
PDBTitle: crystal structure of a transcriptional regulator, merr family from2 bacillus cereus
22d1j9ia_
not modelled 96.9 20
Fold:Putative DNA-binding domain
Superfamily:Putative DNA-binding domain
Family:Terminase gpNU1 subunit domain
23c2jmlA_
not modelled 96.7 21
PDB header:transcription
Chain: A: PDB Molecule:dna binding domain/transcriptional regulator;
PDBTitle: solution structure of the n-terminal domain of cara repressor
24c5gpeB_
not modelled 96.7 11
PDB header:transcription
Chain: B: PDB Molecule:transcriptional regulator, merr-family;
PDBTitle: crystal structure of the transcription regulator pbrr691 from2 ralstonia metallidurans ch34 in complex with lead(ii)
25c5xqlA_
not modelled 96.5 18
PDB header:transcription
Chain: A: PDB Molecule:multidrug-efflux transporter 1 regulator;
PDBTitle: crystal structure of a pseudomonas aeruginosa transcriptional2 regulator
26c3d6zA_
not modelled 96.5 12
PDB header:transcription regulator/dna
Chain: A: PDB Molecule:multidrug-efflux transporter 1 regulator;
PDBTitle: crystal structure of r275e mutant of bmrr bound to dna and rhodamine
27c5crlA_
not modelled 96.4 20
PDB header:metal binding protein
Chain: A: PDB Molecule:mercuric resistance operon regulatory protein;
PDBTitle: crystal structure of the transcription activator tn501 merr in complex2 with mercury (ii)
28c6paxA_
not modelled 94.9 14
PDB header:gene regulation/dna
Chain: A: PDB Molecule:homeobox protein pax-6;
PDBTitle: crystal structure of the human pax-6 paired domain-dna2 complex reveals a general model for pax protein-dna3 interactions
29c1u78A_
not modelled 94.8 6
PDB header:dna binding protein/dna
Chain: A: PDB Molecule:transposable element tc3 transposase;
PDBTitle: structure of the bipartite dna-binding domain of tc32 transposase bound to transposon dna
30c6fkgC_
not modelled 92.3 21
PDB header:toxin
Chain: C: PDB Molecule:rv1990c (mbca);
PDBTitle: crystal structure of the m.tuberculosis mbct-mbca toxin-antitoxin2 complex.
31c1umqA_
not modelled 92.2 20
PDB header:dna-binding protein
Chain: A: PDB Molecule:photosynthetic apparatus regulatory protein;
PDBTitle: solution structure and dna binding of the effector domain2 from the global regulator prra(rega) from r. sphaeroides:3 insights into dna binding specificity
32d1umqa_
not modelled 92.2 20
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:FIS-like
33d1g2ha_
not modelled 92.1 28
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:FIS-like
34c1g2hA_
not modelled 92.1 28
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulatory protein tyrr homolog;
PDBTitle: solution structure of the dna-binding domain of the tyrr2 protein of haemophilus influenzae
35d1fipa_
not modelled 92.1 25
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:FIS-like
36c4lhfA_
not modelled 92.0 29
PDB header:viral protein
Chain: A: PDB Molecule:regulatory protein cox;
PDBTitle: crystal structure of a dna binding protein from phage p2
37d1etxa_
not modelled 91.8 24
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:FIS-like
38c3bd1B_
not modelled 91.3 27
PDB header:transcription
Chain: B: PDB Molecule:cro protein;
PDBTitle: structure of the cro protein from putative prophage element xfaso 1 in2 xylella fastidiosa strain ann-1
39d1biaa1
not modelled 90.5 19
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Biotin repressor-like
40c2m8gX_
not modelled 90.2 28
PDB header:transcription
Chain: X: PDB Molecule:transcriptional regulator;
PDBTitle: structure, function, and tethering of dna-binding domains in 542 transcriptional activators
41d1j5ya1
not modelled 90.1 31
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Biotin repressor-like
42d1ntca_
not modelled 90.0 37
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:FIS-like
43c3e7lD_
not modelled 89.9 23
PDB header:transcription regulator
Chain: D: PDB Molecule:transcriptional regulator (ntrc family);
PDBTitle: crystal structure of sigma54 activator ntrc4's dna binding2 domain
44c6hn7A_
not modelled 89.9 33
PDB header:dna binding protein
Chain: A: PDB Molecule:redirecting phage packaging protein c (rppc);
PDBTitle: hijacking the hijackers: escherichia coli pathogenicity islands2 redirect helper phage packaging for their own benefit.
45c5m7nA_
not modelled 89.8 24
PDB header:signaling protein
Chain: A: PDB Molecule:nitrogen assimilation regulatory protein;
PDBTitle: crystal structure of ntrx from brucella abortus in complex with atp2 processed with the crystaldirect automated mounting and cryo-cooling3 technology
46d1etob_
not modelled 89.7 24
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:FIS-like
47c4r1hA_
not modelled 89.7 16
PDB header:transcription regulator
Chain: A: PDB Molecule:lmo0741 protein;
PDBTitle: gntr family transcriptional regulator from listeria monocytogenes
48c4l5eA_
not modelled 89.5 21
PDB header:protein binding
Chain: A: PDB Molecule:transcriptional regulator (ntrc family);
PDBTitle: crystal structure of a. aeolicus ntrc1 dna binding domain
49d2jn6a1
not modelled 89.4 35
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Cgl2762-like
50d1pm6a_
not modelled 89.3 21
Fold:Putative DNA-binding domain
Superfamily:Putative DNA-binding domain
Family:Excisionase-like
51c2fjrB_
not modelled 89.1 11
PDB header:transcription regulator
Chain: B: PDB Molecule:repressor protein ci;
PDBTitle: crystal structure of bacteriophage 186
52c1ojlD_
not modelled 89.0 27
PDB header:response regulator
Chain: D: PDB Molecule:transcriptional regulatory protein zrar;
PDBTitle: crystal structure of a sigma54-activator suggests the mechanism for2 the conformational switch necessary for sigma54 binding
53c6j05B_
not modelled 88.6 24
PDB header:transcription
Chain: B: PDB Molecule:transcriptional regulator arsr;
PDBTitle: structures of two arsr as(iii)-responsive repressors: implications for2 the mechanism of derepression
54c2oqgA_
not modelled 88.4 19
PDB header:transcription
Chain: A: PDB Molecule:possible transcriptional regulator, arsr family protein;
PDBTitle: arsr-like transcriptional regulator from rhodococcus sp. rha1
55c3eqxB_
not modelled 88.4 16
PDB header:dna binding protein
Chain: B: PDB Molecule:fic domain containing transcriptional regulator;
PDBTitle: crystal structure of a fic family protein (so_4266) from shewanella2 oneidensis at 1.6 a resolution
56c3jthA_
not modelled 87.8 12
PDB header:transcription
Chain: A: PDB Molecule:transcription activator hlyu;
PDBTitle: crystal structure of a transcriptional regulator hlyu from2 vibrio vulnificus cmcp6
57c2rn7A_
not modelled 87.7 18
PDB header:unknown function
Chain: A: PDB Molecule:is629 orfa;
PDBTitle: nmr solution structure of tnpe protein from shigella2 flexneri. northeast structural genomics target sfr125
58c2kpjA_
not modelled 87.5 26
PDB header:transcription regulator
Chain: A: PDB Molecule:sos-response transcriptional repressor, lexa;
PDBTitle: solution structure of protein sos-response transcriptional2 repressor, lexa from eubacterium rectale. northeast3 structural genomics consortium target err9a
59d1r1ta_
not modelled 87.2 21
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:ArsR-like transcriptional regulators
60d1r69a_
not modelled 87.2 19
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:Phage repressors
61c3hefB_
not modelled 87.1 18
PDB header:viral protein
Chain: B: PDB Molecule:gene 1 protein;
PDBTitle: crystal structure of the bacteriophage sf6 terminase small subunit
62c5j9iH_
not modelled 86.9 18
PDB header:antitoxin
Chain: H: PDB Molecule:antitoxin iga-2;
PDBTitle: crystal structure of the higa2 antitoxin c-terminal domain
63d1rh6a_
not modelled 86.9 20
Fold:Putative DNA-binding domain
Superfamily:Putative DNA-binding domain
Family:Excisionase-like
64c1r22B_
not modelled 86.8 22
PDB header:transcription repressor
Chain: B: PDB Molecule:transcriptional repressor smtb;
PDBTitle: crystal structure of the cyanobacterial metallothionein2 repressor smtb (c14s/c61s/c121s mutant) in the zn2alpha5-3 form
65c3omtA_
not modelled 86.7 15
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: putative antitoxin component, chu_2935 protein, from xre family from2 prevotella buccae.
66c2lkpB_
not modelled 86.3 23
PDB header:transcription regulator
Chain: B: PDB Molecule:transcriptional regulator, arsr family;
PDBTitle: solution structure of apo-nmtr
67d2d1ha1
not modelled 86.3 20
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:TrmB-like
68c2gm4B_
not modelled 86.2 22
PDB header:recombination, dna
Chain: B: PDB Molecule:transposon gamma-delta resolvase;
PDBTitle: an activated, tetrameric gamma-delta resolvase: hin chimaera bound to2 cleaved dna
69d2ppxa1
not modelled 86.2 11
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:SinR domain-like
70c2ppxA_
not modelled 86.2 11
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein atu1735;
PDBTitle: crystal structure of a hth xre-family like protein from agrobacterium2 tumefaciens
71c4omzG_
not modelled 86.1 15
PDB header:transcription
Chain: G: PDB Molecule:nolr;
PDBTitle: crystal structure of nolr from sinorhizobium fredii
72c5jaaB_
not modelled 85.8 18
PDB header:toxin
Chain: B: PDB Molecule:antitoxin iga-2;
PDBTitle: crystal structure of the higba2 toxin-antitoxin complex
73c4go1A_
not modelled 85.6 39
PDB header:transcription
Chain: A: PDB Molecule:transcriptional regulator lsrr;
PDBTitle: crystal structure of full length transcription repressor lsrr from e.2 coli.
74c6j0eB_
not modelled 85.6 26
PDB header:transcription
Chain: B: PDB Molecule:arsenic responsive repressor arsr;
PDBTitle: structures of two arsr as(iii)-responsive repressors: implications for2 the mechanism of derepression
75d2ao9a1
not modelled 85.5 32
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Nanomeric phage protein-like
76c2ebyA_
not modelled 85.4 32
PDB header:transcription
Chain: A: PDB Molecule:putative hth-type transcriptional regulator ybaq;
PDBTitle: crystal structure of a hypothetical protein from e. coli
77c2zkzC_
not modelled 85.2 18
PDB header:transcription
Chain: C: PDB Molecule:transcriptional repressor pagr;
PDBTitle: crystal structure of the transcriptional repressor pagr of bacillus2 anthracis
78c3ezfA_
not modelled 85.2 24
PDB header:biosynthetic protein
Chain: A: PDB Molecule:para;
PDBTitle: partition protein
79c3e6dA_
not modelled 85.1 24
PDB header:transcription regulation
Chain: A: PDB Molecule:cyclic nucleotide-binding protein;
PDBTitle: crystal structure of cprk c200s
80c3gn5B_
not modelled 85.0 22
PDB header:dna binding protein
Chain: B: PDB Molecule:hth-type transcriptional regulator mqsa (ygit/b3021);
PDBTitle: structure of the e. coli protein mqsa (ygit/b3021)
81c3bs3A_
not modelled 84.9 21
PDB header:dna binding protein
Chain: A: PDB Molecule:putative dna-binding protein;
PDBTitle: crystal structure of a putative dna-binding protein from bacteroides2 fragilis
82c3f6vA_
not modelled 84.7 21
PDB header:transcription regulator
Chain: A: PDB Molecule:possible transcriptional regulator, arsr family protein;
PDBTitle: crystal structure of possible transcriptional regulator for arsenical2 resistance
83c5dukA_
not modelled 84.7 25
PDB header:transcription
Chain: A: PDB Molecule:putative dna binding protein;
PDBTitle: n-terminal structure of putative dna binding transcription factor from2 thermoplasmatales archaeon scgc ab-539-n05
84d1x57a1
not modelled 84.4 11
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:EDF1-like
85c2w48D_
not modelled 84.4 43
PDB header:transcription
Chain: D: PDB Molecule:sorbitol operon regulator;
PDBTitle: crystal structure of the full-length sorbitol operon2 regulator sorc from klebsiella pneumoniae
86d1rzsa_
not modelled 84.4 25
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:Phage repressors
87d1adra_
not modelled 84.1 14
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:Phage repressors
88c3by6C_
not modelled 84.0 10
PDB header:transcription regulator
Chain: C: PDB Molecule:predicted transcriptional regulator;
PDBTitle: crystal structure of a transcriptional regulator from oenococcus oeni
89c3mlfC_
not modelled 83.8 29
PDB header:transcription regulator
Chain: C: PDB Molecule:transcriptional regulator;
PDBTitle: putative transcriptional regulator from staphylococcus aureus.
90c3cuoB_
not modelled 83.5 18
PDB header:transcription regulator
Chain: B: PDB Molecule:uncharacterized hth-type transcriptional regulator ygav;
PDBTitle: crystal structure of the predicted dna-binding transcriptional2 regulator from e. coli
91c3vk0B_
not modelled 83.5 18
PDB header:dna binding protein
Chain: B: PDB Molecule:transcriptional regulator;
PDBTitle: crystal structure of hypothetical transcription factor nhtf from2 neisseria
92c2xcjB_
not modelled 83.4 32
PDB header:viral protein
Chain: B: PDB Molecule:c protein;
PDBTitle: crystal structure of p2 c, the immunity repressor of2 temperate e. coli phage p2
93d1r1ua_
not modelled 83.4 19
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:ArsR-like transcriptional regulators
94d1b0na2
not modelled 83.3 11
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:SinR domain-like
95d1llib_
not modelled 83.2 21
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:Phage repressors
96c3iwfA_
not modelled 83.2 32
PDB header:transcription regulator
Chain: A: PDB Molecule:transcription regulator rpir family;
PDBTitle: the crystal structure of the n-terminal domain of a rpir2 transcriptional regulator from staphylococcus epidermidis to 1.4a
97d2icta1
not modelled 83.1 14
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:SinR domain-like
98c2r0qF_
not modelled 83.0 22
PDB header:recombination/dna
Chain: F: PDB Molecule:putative transposon tn552 dna-invertase bin3;
PDBTitle: crystal structure of a serine recombinase- dna regulatory2 complex
99c3t76A_
not modelled 83.0 22
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator vanug;
PDBTitle: crystal structure of transcriptional regulator vanug, form ii
100d1i5za1
not modelled 82.8 39
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:CAP C-terminal domain-like
101c3clcC_
not modelled 82.8 11
PDB header:transcription regulator/dna
Chain: C: PDB Molecule:regulatory protein;
PDBTitle: crystal structure of the restriction-modification controller protein2 c.esp1396i tetramer in complex with its natural 35 base-pair operator
102d1y9qa1
not modelled 82.8 21
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:Probable transcriptional regulator VC1968, N-terminal domain
103c3pqkD_
not modelled 82.7 14
PDB header:transcription
Chain: D: PDB Molecule:biofilm growth-associated repressor;
PDBTitle: crystal structure of the transcriptional repressor bigr from xylella2 fastidiosa
104c3trbA_
not modelled 82.7 14
PDB header:dna binding protein
Chain: A: PDB Molecule:virulence-associated protein i;
PDBTitle: structure of an addiction module antidote protein of a higa (higa)2 family from coxiella burnetii
105d1utxa_
not modelled 82.7 29
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:SinR domain-like
106d1mkma1
not modelled 82.6 10
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Transcriptional regulator IclR, N-terminal domain
107c3fmyA_
not modelled 82.6 22
PDB header:dna binding protein
Chain: A: PDB Molecule:hth-type transcriptional regulator mqsa
PDBTitle: structure of the c-terminal domain of the e. coli protein2 mqsa (ygit/b3021)
108c3f6wE_
not modelled 82.4 20
PDB header:dna binding protein
Chain: E: PDB Molecule:xre-family like protein;
PDBTitle: xre-family like protein from pseudomonas syringae pv. tomato str.2 dc3000
109c3i4pA_
not modelled 82.3 25
PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator, asnc family;
PDBTitle: crystal structure of asnc family transcriptional regulator from2 agrobacterium tumefaciens
110d2a6ca1
not modelled 82.1 50
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:NE1354
111c3neuA_
not modelled 82.1 11
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:lin1836 protein;
PDBTitle: the crystal structure of a functionally-unknown protein lin1836 from2 listeria innocua clip11262
112d1y7ya1
not modelled 82.0 21
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:SinR domain-like
113c2o3fC_
not modelled 82.0 28
PDB header:transcription
Chain: C: PDB Molecule:putative hth-type transcriptional regulator ybbh;
PDBTitle: structural genomics, the crystal structure of the n-2 terminal domain of the putative transcriptional regulator3 ybbh from bacillus subtilis subsp. subtilis str. 168.
114c3f6oB_
not modelled 81.9 17
PDB header:transcription regulator
Chain: B: PDB Molecule:probable transcriptional regulator, arsr family
PDBTitle: crystal structure of arsr family transcriptional regulator,2 rha00566
115d2o3fa1
not modelled 81.7 28
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:RpiR-like
116c3op9A_
not modelled 81.7 29
PDB header:transcription regulator
Chain: A: PDB Molecule:pli0006 protein;
PDBTitle: crystal structure of transcriptional regulator from listeria innocua
117d2bjca1
not modelled 81.6 32
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:GalR/LacI-like bacterial regulator
118d3e5ua1
not modelled 81.6 28
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:CAP C-terminal domain-like
119d1ft9a1
not modelled 81.6 35
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:CAP C-terminal domain-like
120c1b0nA_
not modelled 81.5 11
PDB header:transcription regulator
Chain: A: PDB Molecule:protein (sinr protein);
PDBTitle: sinr protein/sini protein complex

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite