Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2319c_(-)_2591858_2592736
DateMon Aug 5 13:25:47 BST 2019
Unique Job IDc455c4b517730a4d
SequenceVTIVVGYLAG ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:56.179 Y:59.202 Z:42.931
Model (left) based on template c3loqA_
Top template information
PDB header:structure genomics, unknown function
Chain: A: PDB Molecule:universal stress protein;
PDBTitle: the crystal structure of a universal stress protein from archaeoglobus2 fulgidus dsm 4304
Confidence and coverage
Confidence:100.0% Coverage: 90%
262 residues ( 90% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3loqA_



100.0 16
PDB header:structure genomics, unknown function
Chain: A: PDB Molecule:universal stress protein;
PDBTitle: the crystal structure of a universal stress protein from archaeoglobus2 fulgidus dsm 4304
2c3olqA_



100.0 13
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:universal stress protein e;
PDBTitle: the crystal structure of a universal stress protein e from proteus2 mirabilis hi4320
3c3mt0A_



100.0 15
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein pa1789;
PDBTitle: the crystal structure of a functionally unknown protein pa1789 from2 pseudomonas aeruginosa pao1
4c4r2jA_



100.0 15
PDB header:metal binding protein, unknown function
Chain: A: PDB Molecule:universal stress protein e;
PDBTitle: crystal structure of ydaa (universal stress protein e) from salmonella2 typhimurium
5c2jaxA_



100.0 22
PDB header:protein binding
Chain: A: PDB Molecule:hypothetical protein tb31.7;
PDBTitle: universal stress protein rv2623 from mycobaterium2 tuberculosis
6c3ab8B_



100.0 19
PDB header:unknown function
Chain: B: PDB Molecule:putative uncharacterized protein ttha0350;
PDBTitle: crystal structure of the hypothetical tandem-type universal stress2 protein ttha0350 complexed with atps.
7c3hgmD_



99.9 14
PDB header:signaling protein
Chain: D: PDB Molecule:universal stress protein tead;
PDBTitle: universal stress protein tead from the trap transporter teaabc of2 halomonas elongata
8d2z3va1



99.9 18
Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Adenine nucleotide alpha hydrolases-like
Family:Universal stress protein-like
9c3s3tD_



99.9 15
PDB header:chaperone
Chain: D: PDB Molecule:nucleotide-binding protein, universal stress protein uspa
PDBTitle: universal stress protein uspa from lactobacillus plantarum
10c5ahwC_



99.9 19
PDB header:signaling protein
Chain: C: PDB Molecule:universal stress protein;
PDBTitle: crystal structure of universal stress protein msmeg_3811 in2 complex with camp
11c3dloC_



99.9 16
PDB header:structural genomics, unknown function
Chain: C: PDB Molecule:universal stress protein;
PDBTitle: structure of universal stress protein from archaeoglobus fulgidus
12d1mjha_



99.9 12
Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Adenine nucleotide alpha hydrolases-like
Family:Universal stress protein-like
13d1tq8a_



99.8 17
Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Adenine nucleotide alpha hydrolases-like
Family:Universal stress protein-like
14c3fg9B_



99.8 13
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:protein of universal stress protein uspa family;
PDBTitle: the crystal structure of an universal stress protein uspa2 family protein from lactobacillus plantarum wcfs1
15c3fh0A_



99.8 14
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative universal stress protein kpn_01444;
PDBTitle: crystal structure of putative universal stress protein kpn_01444 -2 atpase
16c4wnyA_



99.8 14
PDB header:signaling protein
Chain: A: PDB Molecule:universal stress protein;
PDBTitle: crystal structure of a protein from the universal stress protein2 family from burkholderia pseudomallei
17c4r2lB_



99.8 13
PDB header:unknown function
Chain: B: PDB Molecule:universal stress protein f;
PDBTitle: crystal structure of ynaf (universal stress protein f) from salmonella2 typhimurium
18d1jmva_



99.8 14
Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Adenine nucleotide alpha hydrolases-like
Family:Universal stress protein-like
19d2gm3a1



99.8 14
Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Adenine nucleotide alpha hydrolases-like
Family:Universal stress protein-like
20c2pfsA_



99.8 17
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:universal stress protein;
PDBTitle: crystal structure of universal stress protein from nitrosomonas2 europaea
21c2dumD_



not modelled 99.8 14
PDB header:structural genomics, unknown function
Chain: D: PDB Molecule:hypothetical protein ph0823;
PDBTitle: crystal structure of hypothetical protein, ph0823
22d1q77a_



not modelled 99.7 15
Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Adenine nucleotide alpha hydrolases-like
Family:Universal stress protein-like
23c3idfA_



not modelled 99.7 13
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:usp-like protein;
PDBTitle: the crystal structure of a usp-like protein from wolinella2 succinogenes to 2.0a
24c4kpuB_



not modelled 96.2 20
PDB header:electron transport
Chain: B: PDB Molecule:electron transfer flavoprotein alpha/beta-subunit;
PDBTitle: electron transferring flavoprotein of acidaminococcus fermentans:2 towards a mechanism of flavin-based electron bifurcation
25d1o94c_



not modelled 94.8 16
Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Adenine nucleotide alpha hydrolases-like
Family:ETFP subunits
26c3g40A_



not modelled 94.6 11
PDB header:transport protein
Chain: A: PDB Molecule:na-k-cl cotransporter;
PDBTitle: crystal structure of the cytoplasmic domain of a2 prokaryotic cation chloride cotransporter
27d3clsc1



not modelled 93.4 19
Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Adenine nucleotide alpha hydrolases-like
Family:ETFP subunits
28c5ol2E_



not modelled 92.1 13
PDB header:flavoprotein
Chain: E: PDB Molecule:electron transfer flavoprotein small subunit;
PDBTitle: the electron transferring flavoprotein/butyryl-coa dehydrogenase2 complex from clostridium difficile
29c6fahB_



not modelled 90.6 18
PDB header:flavoprotein
Chain: B: PDB Molecule:caffeyl-coa reductase-etf complex subunit card;
PDBTitle: molecular basis of the flavin-based electron-bifurcating caffeyl-coa2 reductase reaction
30d1efpb_



not modelled 86.0 15
Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Adenine nucleotide alpha hydrolases-like
Family:ETFP subunits
31c5ow0B_



not modelled 85.9 19
PDB header:electron transport
Chain: B: PDB Molecule:electron transfer flavoprotein, beta subunit;
PDBTitle: crystal structure of an electron transfer flavoprotein from2 geobacillus metallireducens
32c5gafi_



not modelled 83.8 13
PDB header:ribosome
Chain: I: PDB Molecule:50s ribosomal protein l10;
PDBTitle: rnc in complex with srp
33c3a2kB_



not modelled 78.8 15
PDB header:ligase/rna
Chain: B: PDB Molecule:trna(ile)-lysidine synthase;
PDBTitle: crystal structure of tils complexed with trna
34c4ltyD_



not modelled 77.9 12
PDB header:hydrolase
Chain: D: PDB Molecule:exonuclease subunit sbcd;
PDBTitle: crystal structure of e.coli sbcd at 1.8 a resolution
35d1efvb_



not modelled 77.6 17
Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Adenine nucleotide alpha hydrolases-like
Family:ETFP subunits
36c2j289_



not modelled 77.5 15
PDB header:ribosome
Chain: 9: PDB Molecule:signal recognition particle 54;
PDBTitle: model of e. coli srp bound to 70s rncs
37c2ejbA_



not modelled 74.4 10
PDB header:lyase
Chain: A: PDB Molecule:probable aromatic acid decarboxylase;
PDBTitle: crystal structure of phenylacrylic acid decarboxylase from2 aquifex aeolicus
38c1kh2D_



not modelled 73.1 18
PDB header:ligase
Chain: D: PDB Molecule:argininosuccinate synthetase;
PDBTitle: crystal structure of thermus thermophilus hb8 argininosuccinate2 synthetase in complex with atp
39c6eoaA_



not modelled 70.2 9
PDB header:flavoprotein
Chain: A: PDB Molecule:phosphopantothenoylcysteine decarboxylase;
PDBTitle: crystal structure of hal3 from cryptococcus neoformans
40c2q8uA_



not modelled 69.4 17
PDB header:hydrolase
Chain: A: PDB Molecule:exonuclease, putative;
PDBTitle: crystal structure of mre11 from thermotoga maritima msb8 (tm1635) at2 2.20 a resolution
41c2e21A_



not modelled 68.5 15
PDB header:ligase
Chain: A: PDB Molecule:trna(ile)-lysidine synthase;
PDBTitle: crystal structure of tils in a complex with amppnp from aquifex2 aeolicus.
42c4mm1E_



not modelled 67.8 20
PDB header:transferase
Chain: E: PDB Molecule:geranylgeranylglyceryl phosphate synthase;
PDBTitle: gggps from methanothermobacter thermautotrophicus
43d1uf3a_



not modelled 66.4 18
Fold:Metallo-dependent phosphatases
Superfamily:Metallo-dependent phosphatases
Family:TT1561-like
44d1ii7a_



not modelled 65.7 18
Fold:Metallo-dependent phosphatases
Superfamily:Metallo-dependent phosphatases
Family:DNA double-strand break repair nuclease
45c3auzA_



not modelled 65.5 10
PDB header:recombination
Chain: A: PDB Molecule:dna double-strand break repair protein mre11;
PDBTitle: crystal structure of mre11 with manganese
46d1j20a1



not modelled 63.0 19
Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Adenine nucleotide alpha hydrolases-like
Family:N-type ATP pyrophosphatases
47c3qg5D_



not modelled 62.5 17
PDB header:hydrolase
Chain: D: PDB Molecule:mre11;
PDBTitle: the mre11:rad50 complex forms an atp dependent molecular clamp in dna2 double-strand break repair
48d1np7a2



not modelled 62.2 12
Fold:Cryptochrome/photolyase, N-terminal domain
Superfamily:Cryptochrome/photolyase, N-terminal domain
Family:Cryptochrome/photolyase, N-terminal domain
49c2xmoB_



not modelled 62.0 13
PDB header:hydrolase
Chain: B: PDB Molecule:lmo2642 protein;
PDBTitle: the crystal structure of lmo2642
50d2yvta1



not modelled 61.3 26
Fold:Metallo-dependent phosphatases
Superfamily:Metallo-dependent phosphatases
Family:TT1561-like
51c6jddA_



not modelled 56.9 12
PDB header:biosynthetic protein
Chain: A: PDB Molecule:cypemycin cysteine dehydrogenase (decarboxylating);
PDBTitle: crystal structure of the cypemycin decarboxylase cypd.
52c3av0A_



not modelled 56.8 6
PDB header:recombination
Chain: A: PDB Molecule:dna double-strand break repair protein mre11;
PDBTitle: crystal structure of mre11-rad50 bound to atp s
53c4fcxB_



not modelled 56.0 22
PDB header:hydrolase
Chain: B: PDB Molecule:dna repair protein rad32;
PDBTitle: s.pombe mre11 apoenzym
54c2ze5A_



not modelled 55.8 13
PDB header:transferase
Chain: A: PDB Molecule:isopentenyl transferase;
PDBTitle: crystal structure of adenosine phosphate-isopentenyltransferase
55c2iy3A_



not modelled 55.3 14
PDB header:rna-binding
Chain: A: PDB Molecule:signal recognition particle protein,signal recognition
PDBTitle: structure of the e. coli signal regognition particle
56c6jlsA_



not modelled 54.9 18
PDB header:biosynthetic protein
Chain: A: PDB Molecule:putative flavoprotein decarboxylase;
PDBTitle: crystal structure of fmn-dependent cysteine decarboxylases tvaf from2 thioviridamide biosynthesis
57d1gsoa2



not modelled 54.0 21
Fold:PreATP-grasp domain
Superfamily:PreATP-grasp domain
Family:BC N-terminal domain-like
58c3cvyA_



not modelled 53.0 12
PDB header:lyase/dna
Chain: A: PDB Molecule:re11660p;
PDBTitle: drosophila melanogaster (6-4) photolyase bound to repaired ds dna
59c3dm5A_



not modelled 52.0 10
PDB header:rna binding protein, transport protein
Chain: A: PDB Molecule:signal recognition 54 kda protein;
PDBTitle: structures of srp54 and srp19, the two proteins assembling the2 ribonucleic core of the signal recognition particle from the archaeon3 pyrococcus furiosus.
60d1vbka1



not modelled 50.9 14
Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Adenine nucleotide alpha hydrolases-like
Family:ThiI-like
61c4fbkB_



not modelled 49.4 22
PDB header:hydrolase, protein binding
Chain: B: PDB Molecule:dna repair and telomere maintenance protein nbs1,dna repair
PDBTitle: crystal structure of a covalently fused nbs1-mre11 complex with one2 manganese ion per active site
62d2hy5a1



not modelled 47.1 9
Fold:DsrEFH-like
Superfamily:DsrEFH-like
Family:DsrEF-like
63c2yxbA_



not modelled 46.4 12
PDB header:isomerase
Chain: A: PDB Molecule:coenzyme b12-dependent mutase;
PDBTitle: crystal structure of the methylmalonyl-coa mutase alpha-subunit from2 aeropyrum pernix
64d1wy5a1



not modelled 46.0 10
Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Adenine nucleotide alpha hydrolases-like
Family:PP-loop ATPase
65d1nu0a_



not modelled 45.0 10
Fold:Ribonuclease H-like motif
Superfamily:Ribonuclease H-like
Family:Putative Holliday junction resolvase RuvX
66c3t1iC_



not modelled 44.8 20
PDB header:hydrolase
Chain: C: PDB Molecule:double-strand break repair protein mre11a;
PDBTitle: crystal structure of human mre11: understanding tumorigenic mutations
67c2j37W_



not modelled 44.7 11
PDB header:ribosome
Chain: W: PDB Molecule:signal recognition particle 54 kda protein (srp54);
PDBTitle: model of mammalian srp bound to 80s rncs
68c3vrhA_



not modelled 41.8 14
PDB header:rna binding protein
Chain: A: PDB Molecule:putative uncharacterized protein ph0300;
PDBTitle: crystal structure of ph0300
69c2v3cC_



not modelled 37.8 16
PDB header:signaling protein
Chain: C: PDB Molecule:signal recognition 54 kda protein;
PDBTitle: crystal structure of the srp54-srp19-7s.s srp rna complex2 of m. jannaschii
70c3vkbA_



not modelled 37.6 14
PDB header:transferase
Chain: A: PDB Molecule:moeo5;
PDBTitle: crystal structure of moeo5 soaked with fspp overnight
71c3gndC_



not modelled 37.4 19
PDB header:lyase
Chain: C: PDB Molecule:aldolase lsrf;
PDBTitle: crystal structure of e. coli lsrf in complex with ribulose-5-phosphate
72c4grdA_



not modelled 37.0 16
PDB header:lyase,isomerase
Chain: A: PDB Molecule:phosphoribosylaminoimidazole carboxylase catalytic subunit;
PDBTitle: crystal structure of phosphoribosylaminoimidazole carboxylase2 catalytic subunit from burkholderia cenocepacia j2315
73d1sbza_



not modelled 35.3 12
Fold:Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
Superfamily:Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
Family:Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
74c3pm6B_



not modelled 34.4 17
PDB header:lyase
Chain: B: PDB Molecule:putative fructose-bisphosphate aldolase;
PDBTitle: crystal structure of a putative fructose-1,6-biphosphate aldolase from2 coccidioides immitis solved by combined sad mr
75d2g0ta1



not modelled 33.5 17
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Nitrogenase iron protein-like
76d1e0ta3



not modelled 32.9 24
Fold:Pyruvate kinase C-terminal domain-like
Superfamily:PK C-terminal domain-like
Family:Pyruvate kinase, C-terminal domain
77d1o4va_



not modelled 31.1 18
Fold:Flavodoxin-like
Superfamily:N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
Family:N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
78c5l3rC_



not modelled 30.9 13
PDB header:protein transport
Chain: C: PDB Molecule:signal recognition particle 54 kda protein, chloroplastic;
PDBTitle: structure of the gtpase heterodimer of chloroplast srp54 and ftsy from2 arabidopsis thaliana
79c1qzwC_



not modelled 30.6 14
PDB header:signaling protein/rna
Chain: C: PDB Molecule:signal recognition 54 kda protein;
PDBTitle: crystal structure of the complete core of archaeal srp and2 implications for inter-domain communication
80c1qzuB_



not modelled 30.4 13
PDB header:lyase
Chain: B: PDB Molecule:hypothetical protein mds018;
PDBTitle: crystal structure of human phosphopantothenoylcysteine decarboxylase
81c5ghaC_



not modelled 29.8 26
PDB header:transferase/transport protein
Chain: C: PDB Molecule:sulfur transferase ttua;
PDBTitle: sulfur transferase ttua in complex with sulfur carrier ttub
82c2p0yA_



not modelled 29.6 17
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein lp_0780;
PDBTitle: crystal structure of q88yi3_lacpl from lactobacillus plantarum.2 northeast structural genomics consortium target lpr6
83c4r3uD_



not modelled 29.6 10
PDB header:isomerase
Chain: D: PDB Molecule:2-hydroxyisobutyryl-coa mutase small subunit;
PDBTitle: crystal structure of 2-hydroxyisobutyryl-coa mutase
84d1pkla3



not modelled 29.6 12
Fold:Pyruvate kinase C-terminal domain-like
Superfamily:PK C-terminal domain-like
Family:Pyruvate kinase, C-terminal domain
85d2iela1



not modelled 28.4 14
Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Adenine nucleotide alpha hydrolases-like
Family:Universal stress protein-like
86c3ib7A_



not modelled 28.2 10
PDB header:hydrolase
Chain: A: PDB Molecule:icc protein;
PDBTitle: crystal structure of full length rv0805
87d2d1pa1



not modelled 28.0 10
Fold:DsrEFH-like
Superfamily:DsrEFH-like
Family:DsrEF-like
88c4r81C_



not modelled 27.8 8
PDB header:oxidoreductase
Chain: C: PDB Molecule:nadh dehydrogenase;
PDBTitle: nad(p)h:quinone oxidoreductase from methanothermobacter marburgensis
89c1s3mA_



not modelled 27.5 14
PDB header:phosphodiesterase
Chain: A: PDB Molecule:hypothetical protein mj0936;
PDBTitle: structural and functional characterization of a novel2 archaeal phosphodiesterase
90d1s3la_



not modelled 27.5 14
Fold:Metallo-dependent phosphatases
Superfamily:Metallo-dependent phosphatases
Family:YfcE-like
91d1m7ja3



not modelled 27.1 17
Fold:TIM beta/alpha-barrel
Superfamily:Metallo-dependent hydrolases
Family:D-aminoacylase, catalytic domain
92c2ppvA_



not modelled 26.6 16
PDB header:transferase
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a protein belonging to the upf0052 (se_0549) from2 staphylococcus epidermidis atcc 12228 at 2.00 a resolution
93c4ykeA_



not modelled 26.4 20
PDB header:hydrolase
Chain: A: PDB Molecule:mre11;
PDBTitle: crystal structure of eukaryotic mre11 catalytic domain from chaetomium2 thermophilum
94d1xmpa_



not modelled 26.4 13
Fold:Flavodoxin-like
Superfamily:N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
Family:N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
95c5ol2D_



not modelled 25.6 17
PDB header:flavoprotein
Chain: D: PDB Molecule:electron transfer flavoprotein large subunit;
PDBTitle: the electron transferring flavoprotein/butyryl-coa dehydrogenase2 complex from clostridium difficile
96d2p1ra1



not modelled 25.6 24
Fold:NAD kinase/diacylglycerol kinase-like
Superfamily:NAD kinase/diacylglycerol kinase-like
Family:Diacylglycerol kinase-like
97c1ni5A_



not modelled 23.1 14
PDB header:cell cycle
Chain: A: PDB Molecule:putative cell cycle protein mesj;
PDBTitle: structure of the mesj pp-atpase from escherichia coli
98d1to6a_



not modelled 22.8 21
Fold:Glycerate kinase I
Superfamily:Glycerate kinase I
Family:Glycerate kinase I
99d1ni5a1



not modelled 22.4 20
Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Adenine nucleotide alpha hydrolases-like
Family:PP-loop ATPase
100c2xrzA_



not modelled 22.4 11
PDB header:lyase/dna
Chain: A: PDB Molecule:deoxyribodipyrimidine photolyase;
PDBTitle: x-ray structure of archaeal class ii cpd photolyase from2 methanosarcina mazei in complex with intact cpd-lesion
101d1qzua_



not modelled 21.7 13
Fold:Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
Superfamily:Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
Family:Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
102d3bula2



not modelled 21.2 9
Fold:Flavodoxin-like
Superfamily:Cobalamin (vitamin B12)-binding domain
Family:Cobalamin (vitamin B12)-binding domain
103c2pjuD_



not modelled 21.1 14
PDB header:transcription
Chain: D: PDB Molecule:propionate catabolism operon regulatory protein;
PDBTitle: crystal structure of propionate catabolism operon regulatory protein2 prpr
104c6qlgD_



not modelled 20.6 13
PDB header:transferase
Chain: D: PDB Molecule:flavin prenyltransferase pad1, mitochondrial;
PDBTitle: crystal structure of anubix (pada1) in complex with fmn and2 dimethylallyl pyrophosphate
105c6ofuC_



not modelled 20.1 15
PDB header:lyase
Chain: C: PDB Molecule:ydji aldolase;
PDBTitle: x-ray crystal structure of the ydji aldolase from escherichia coli k12

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