Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2325c_(-)_2597019_2597867
DateMon Aug 5 13:25:47 BST 2019
Unique Job ID6ec5738ddef5bc3d
SequenceMTTTSAPARN ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:58.847 Y:71.866 Z:72.377
Model (left) based on template c5d7tH_
Top template information
PDB header:transport protein
Chain: H: PDB Molecule:energy-coupling factor transporter transmembrane protein
PDBTitle: folate ecf transporter: apo state
Confidence and coverage
Confidence:100.0% Coverage: 88%
247 residues ( 88% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c5d7tH_



100.0 18
PDB header:transport protein
Chain: H: PDB Molecule:energy-coupling factor transporter transmembrane protein
PDBTitle: folate ecf transporter: apo state
2c4huqT_



100.0 21
PDB header:hydrolase
Chain: T: PDB Molecule:energy-coupling factor transporter transmembrane protein
PDBTitle: crystal structure of a transporter
3c4rfsT_



100.0 19
PDB header:hydrolase, transport protein
Chain: T: PDB Molecule:energy-coupling factor transporter transmembrane protein
PDBTitle: structure of a pantothenate energy coupling factor transporter
4c5x3xq_



100.0 20
PDB header:transport protein
Chain: Q: PDB Molecule:uncharacterized protein cbiq;
PDBTitle: 2.8a resolution structure of a cobalt energy-coupling factor2 transporter-cbimqo
5c3hd7A_



17.9 12
PDB header:exocytosis
Chain: A: PDB Molecule:vesicle-associated membrane protein 2;
PDBTitle: helical extension of the neuronal snare complex into the membrane,2 spacegroup c 1 2 1
6c2xzmL_



17.5 23
PDB header:ribosome
Chain: L: PDB Molecule:40s ribosomal protein s12;
PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 1
7c1s1hL_



17.3 15
PDB header:ribosome
Chain: L: PDB Molecule:40s ribosomal protein s23;
PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from yeast2 obtained by docking atomic models for rna and protein components into3 a 11.7 a cryo-em map. this file, 1s1h, contains 40s subunit. the 60s4 ribosomal subunit is in file 1s1i.
8c3u5gX_



14.6 17
PDB header:ribosome
Chain: X: PDB Molecule:40s ribosomal protein s23-a;
PDBTitle: the structure of the eukaryotic ribosome at 3.0 a resolution. this2 entry contains proteins of the 40s subunit, ribosome b
9d1k4ta2



13.5 20
Fold:DNA breaking-rejoining enzymes
Superfamily:DNA breaking-rejoining enzymes
Family:Eukaryotic DNA topoisomerase I, catalytic core
10c3j20N_



12.9 25
PDB header:ribosome
Chain: N: PDB Molecule:30s ribosomal protein s12p;
PDBTitle: promiscuous behavior of proteins in archaeal ribosomes revealed by2 cryo-em: implications for evolution of eukaryotic ribosomes (30s3 ribosomal subunit)
11c2zkql_



12.2 15
PDB header:ribosomal protein/rna
Chain: L: PDB Molecule:
PDBTitle: structure of a mammalian ribosomal 40s subunit within an 80s complex2 obtained by docking homology models of the rna and proteins into an3 8.7 a cryo-em map
12c3zeyS_



10.8 25
PDB header:ribosome
Chain: S: PDB Molecule:40s ribosomal protein s23, putative;
PDBTitle: high-resolution cryo-electron microscopy structure of the trypanosoma2 brucei ribosome
13c2mv6A_



10.3 29
PDB header:membrane protein
Chain: A: PDB Molecule:erythropoietin receptor;
PDBTitle: solution structure of the transmembrane domain and the juxta-membrane2 domain of the erythropoietin receptor in micelles
14c5xyiX_



8.7 17
PDB header:ribosome
Chain: X: PDB Molecule:40s ribosomal protein s23, putative;
PDBTitle: small subunit of trichomonas vaginalis ribosome
15c5jx6C_



6.1 20
PDB header:hydrolase
Chain: C: PDB Molecule:glucanase;
PDBTitle: gh6 orpinomyces sp. y102 enzyme
16c3skqA_



5.9 19
PDB header:metal transport
Chain: A: PDB Molecule:mitochondrial distribution and morphology protein 38;
PDBTitle: mdm38 is a 14-3-3-like receptor and associates with the protein2 synthesis machinery at the inner mitochondrial membrane
17c2lsmA_



5.7 20
PDB header:chaperone
Chain: A: PDB Molecule:dna-packaging protein fi;
PDBTitle: solution structure of gpfi c-terminal domain
18c3ol0C_



5.3 27
PDB header:de novo protein
Chain: C: PDB Molecule:de novo designed monomer trefoil-fold sub-domain which
PDBTitle: crystal structure of monofoil-4p homo-trimer: de novo designed monomer2 trefoil-fold sub-domain which forms homo-trimer assembly

Binding site prediction 

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below