Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2330c_(lppP)_2603705_2604232
DateMon Aug 5 13:25:48 BST 2019
Unique Job ID3de962f479b9cddf
SequenceVRRQRSAVPI ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:34.250 Y:17.828 Z:27.160
Model (left) based on template c3pe9D_
Top template information
PDB header:unknown function
Chain: D: PDB Molecule:fibronectin(iii)-like module;
PDBTitle: structures of clostridium thermocellum cbha fibronectin(iii)-like2 modules
Confidence and coverage
Confidence: 76.7% Coverage: 22%
39 residues ( 22% of your sequence) have been modelled with 76.7% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3pe9D_



76.7 18
PDB header:unknown function
Chain: D: PDB Molecule:fibronectin(iii)-like module;
PDBTitle: structures of clostridium thermocellum cbha fibronectin(iii)-like2 modules
2c3pdgA_



68.4 19
PDB header:unknown function
Chain: A: PDB Molecule:fibronectin(iii)-like module;
PDBTitle: structures of clostridium thermocellum cbha fibronectin(iii)-like2 modules
3c3pe9B_



67.3 21
PDB header:unknown function
Chain: B: PDB Molecule:fibronectin(iii)-like module;
PDBTitle: structures of clostridium thermocellum cbha fibronectin(iii)-like2 modules
4d1ukca_



44.0 13
Fold:alpha/beta-Hydrolases
Superfamily:alpha/beta-Hydrolases
Family:Fungal lipases
5c5a2gB_



43.1 16
PDB header:hydrolase
Chain: B: PDB Molecule:carboxylic ester hydrolase;
PDBTitle: an esterase from anaerobic clostridium hathewayi can2 hydrolyze aliphatic aromatic polyesters
6c3pe9C_



38.0 18
PDB header:unknown function
Chain: C: PDB Molecule:fibronectin(iii)-like module;
PDBTitle: structures of clostridium thermocellum cbha fibronectin(iii)-like2 modules
7c3pe9A_



38.0 18
PDB header:unknown function
Chain: A: PDB Molecule:fibronectin(iii)-like module;
PDBTitle: structures of clostridium thermocellum cbha fibronectin(iii)-like2 modules
8c5w1uA_



36.7 16
PDB header:hydrolase
Chain: A: PDB Molecule:carboxylic ester hydrolase;
PDBTitle: culex quinquefasciatus carboxylesterase b2
9c6chgB_



36.5 14
PDB header:transferase
Chain: B: PDB Molecule:klla0c10945p;
PDBTitle: crystal structure of the yeast compass catalytic module
10c4fg5B_



35.1 12
PDB header:hydrolase
Chain: B: PDB Molecule:e3 alpha-esterase-7 caboxylesterase;
PDBTitle: crystal structure of the alpha-esterase-7 carboxylesterase, e3, from2 lucilia cuprina
11c4hg6B_



32.3 14
PDB header:transferase
Chain: B: PDB Molecule:cellulose synthase subunit b;
PDBTitle: structure of a cellulose synthase - cellulose translocation2 intermediate
12d1v0ea1



32.1 18
Fold:6-bladed beta-propeller
Superfamily:Sialidases
Family:Endo-alpha-sialidase
13c4xw3B_



30.5 11
PDB header:hydrolase
Chain: B: PDB Molecule:atp-dependent rna helicase ddx1;
PDBTitle: crystal structure of the spry domain of the human dead-box protein2 ddx1
14c6i2tC_



29.9 10
PDB header:hydrolase
Chain: C: PDB Molecule:cholinesterase;
PDBTitle: cryoem reconstruction of full-length, fully-glycosylated human2 butyrylcholinesterase tetramer
15c2pm8A_



29.7 10
PDB header:hydrolase
Chain: A: PDB Molecule:cholinesterase;
PDBTitle: crystal structure of recombinant full length human2 butyrylcholinesterase
16c4p9lA_



26.0 8
PDB header:transport protein
Chain: A: PDB Molecule:ryanodine receptor 2;
PDBTitle: crystal structure of mouse ryanodine receptor 2 spry2 domain (1080-2 1253) disease mutant a1107m
17c4bdtA_



25.1 17
PDB header:hydrolase/inhibitor
Chain: A: PDB Molecule:acetylcholinesterase;
PDBTitle: human acetylcholinesterase in complex with huprine w and fasciculin 2
18d1p0ia_



24.9 10
Fold:alpha/beta-Hydrolases
Superfamily:alpha/beta-Hydrolases
Family:Acetylcholinesterase-like
19d1llfa_



23.3 6
Fold:alpha/beta-Hydrolases
Superfamily:alpha/beta-Hydrolases
Family:Fungal lipases
20d2ha2a1



22.3 17
Fold:alpha/beta-Hydrolases
Superfamily:alpha/beta-Hydrolases
Family:Acetylcholinesterase-like
21d1qe3a_



not modelled 22.2 12
Fold:alpha/beta-Hydrolases
Superfamily:alpha/beta-Hydrolases
Family:Acetylcholinesterase-like
22d1f8ua_



not modelled 21.0 19
Fold:alpha/beta-Hydrolases
Superfamily:alpha/beta-Hydrolases
Family:Acetylcholinesterase-like
23c1f8uA_



not modelled 21.0 19
PDB header:hydrolase/toxin
Chain: A: PDB Molecule:acetylcholinesterase;
PDBTitle: crystal structure of mutant e202q of human acetylcholinesterase2 complexed with green mamba venom peptide fasciculin-ii
24d2fnja1



not modelled 19.0 19
Fold:Concanavalin A-like lectins/glucanases
Superfamily:Concanavalin A-like lectins/glucanases
Family:SPRY domain
25d1dx4a_



not modelled 18.8 8
Fold:alpha/beta-Hydrolases
Superfamily:alpha/beta-Hydrolases
Family:Acetylcholinesterase-like
26c3r87A_



not modelled 17.2 8
PDB header:unknown function
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of orf6 protein from photobacterium profundum
27d1ggbh1



not modelled 16.6 11
Fold:Immunoglobulin-like beta-sandwich
Superfamily:Immunoglobulin
Family:V set domains (antibody variable domain-like)
28d2bcea_



not modelled 16.4 10
Fold:alpha/beta-Hydrolases
Superfamily:alpha/beta-Hydrolases
Family:Acetylcholinesterase-like
29d2ij0c1



not modelled 16.4 14
Fold:Immunoglobulin-like beta-sandwich
Superfamily:Immunoglobulin
Family:V set domains (antibody variable domain-like)
30c5f21B_



not modelled 16.3 11
PDB header:hydrolase/immune system
Chain: B: PDB Molecule:nanobody mu375;
PDBTitle: human cd38 in complex with nanobody mu375
31c2ogsA_



not modelled 16.2 15
PDB header:hydrolase
Chain: A: PDB Molecule:thermostable carboxylesterase est50;
PDBTitle: crystal structure of the geobacillus stearothermophilus2 carboxylesterase est55 at ph 6.2
32d1pj5a1



not modelled 16.0 11
Fold:Elongation factor/aminomethyltransferase common domain
Superfamily:Aminomethyltransferase beta-barrel domain
Family:Aminomethyltransferase beta-barrel domain
33d2afja1



not modelled 15.8 13
Fold:Concanavalin A-like lectins/glucanases
Superfamily:Concanavalin A-like lectins/glucanases
Family:SPRY domain
34c2yyoA_



not modelled 15.8 27
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:spry domain-containing protein 3;
PDBTitle: crystal sturcture of human spry domain
35c5dleD_



not modelled 15.0 33
PDB header:transferase
Chain: D: PDB Molecule:pts system, fructose-specific iiabc component;
PDBTitle: crystal structure from a domain (thr161-f265) from fructose-specific2 iiabc component (pts system) from borrelia burgdorferi
36c6bx3K_



not modelled 15.0 28
PDB header:gene regulation/transferase
Chain: K: PDB Molecule:compass component bre2;
PDBTitle: structure of histone h3k4 methyltransferase
37d1ymme1



not modelled 14.9 12
Fold:Immunoglobulin-like beta-sandwich
Superfamily:Immunoglobulin
Family:V set domains (antibody variable domain-like)
38c6e2hD_



not modelled 14.5 14
PDB header:protein binding
Chain: D: PDB Molecule:set1/ash2 histone methyltransferase complex subunit ash2;
PDBTitle: crystal structure of human ash2l (spry domain and sdi motif) in2 complex with full length dpy-30
39c2m1zA_



not modelled 14.1 33
PDB header:transferase
Chain: A: PDB Molecule:lmo0427 protein;
PDBTitle: solution structure of uncharacterized protein lmo0427
40d2hfda1



not modelled 13.7 25
Fold:Thioredoxin fold
Superfamily:Thioredoxin-like
Family:HyaE-like
41d1thga_



not modelled 13.6 14
Fold:alpha/beta-Hydrolases
Superfamily:alpha/beta-Hydrolases
Family:Fungal lipases
42c5e24D_



not modelled 13.2 25
PDB header:transport/dna binding/dna
Chain: D: PDB Molecule:protein hairless;
PDBTitle: structure of the su(h)-hairless-dna repressor complex
43c5gsfA_



not modelled 12.9 44
PDB header:hydrolase inhibitor
Chain: A: PDB Molecule:roseltide rt1;
PDBTitle: structure of roseltide rt1
44d1mieh1



not modelled 12.5 13
Fold:Immunoglobulin-like beta-sandwich
Superfamily:Immunoglobulin
Family:V set domains (antibody variable domain-like)
45c5zt3A_



not modelled 12.5 21
PDB header:plant protein
Chain: A: PDB Molecule:wa352;
PDBTitle: crystal structure of wa352 from oryza sativa
46c2qsiB_



not modelled 12.1 25
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:putative hydrogenase expression/formation protein hupg;
PDBTitle: crystal structure of putative hydrogenase expression/formation protein2 hupg from rhodopseudomonas palustris cga009
47c5sxyA_



not modelled 12.0 19
PDB header:chaperone
Chain: A: PDB Molecule:bifunctional coenzyme pqq synthesis protein c/d;
PDBTitle: the solution nmr structure for the pqqd truncation of methylobacterium2 extorquens pqqcd representing a functional and stand-alone3 ribosomally synthesized and post-translational modified (ripp)4 recognition element (rre)
48c3g2bA_



not modelled 12.0 19
PDB header:biosynthetic protein
Chain: A: PDB Molecule:coenzyme pqq synthesis protein d;
PDBTitle: crystal structure of pqqd from xanthomonas campestris
49d1crla_



not modelled 11.9 8
Fold:alpha/beta-Hydrolases
Superfamily:alpha/beta-Hydrolases
Family:Fungal lipases
50d1k4ya_



not modelled 11.8 14
Fold:alpha/beta-Hydrolases
Superfamily:alpha/beta-Hydrolases
Family:Acetylcholinesterase-like
51d1lr0a_



not modelled 11.7 19
Fold:TolA/TonB C-terminal domain
Superfamily:TolA/TonB C-terminal domain
Family:TolA
52c2kyrA_



not modelled 11.4 33
PDB header:transferase
Chain: A: PDB Molecule:fructose-like phosphotransferase enzyme iib component 1;
PDBTitle: solution structure of enzyme iib subunit of pts system from2 escherichia coli k12. northeast structural genomics consortium target3 er315/ontario center for structural proteomics target ec0544
53c1v0eB_



not modelled 11.1 19
PDB header:hydrolase
Chain: B: PDB Molecule:endo-alpha-sialidase;
PDBTitle: endosialidase of bacteriophage k1f
54c4mqtB_



not modelled 10.8 14
PDB header:signaling protein
Chain: B: PDB Molecule:nanobody 9-8;
PDBTitle: structure of active human m2 muscarinic acetylcholine receptor bound2 to the agonist iperoxo and allosteric modulator ly2119620
55d1gpla1



not modelled 10.4 16
Fold:Lipase/lipooxygenase domain (PLAT/LH2 domain)
Superfamily:Lipase/lipooxygenase domain (PLAT/LH2 domain)
Family:Colipase-binding domain
56c2a7yA_



not modelled 10.2 15
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein rv2302/mt2359;
PDBTitle: solution structure of the conserved hypothetical protein2 rv2302 from the bacterium mycobacterium tuberculosis
57d2a7ya1



not modelled 10.2 15
Fold:SH3-like barrel
Superfamily:Cell growth inhibitor/plasmid maintenance toxic component
Family:Rv2302-like
58d1f6wa_



not modelled 10.1 12
Fold:alpha/beta-Hydrolases
Superfamily:alpha/beta-Hydrolases
Family:Acetylcholinesterase-like
59c4p9jC_



not modelled 9.7 12
PDB header:transport protein
Chain: C: PDB Molecule:ryanodine receptor 1;
PDBTitle: crystal structure of rabbit ryanodine receptor 1 spry2 domain (1070-2 1246)
60c4crrA_



not modelled 9.6 10
PDB header:hydrolase
Chain: A: PDB Molecule:endo-1,3-beta-glucanase, family gh16;
PDBTitle: crystal structure of the c-terminal cbm6 of lamc a marine2 laminarianse from zobellia galactanivorans
61c2grxC_



not modelled 9.3 29
PDB header:metal transport
Chain: C: PDB Molecule:protein tonb;
PDBTitle: crystal structure of tonb in complex with fhua, e. coli2 outer membrane receptor for ferrichrome
62d1ea5a_



not modelled 9.2 15
Fold:alpha/beta-Hydrolases
Superfamily:alpha/beta-Hydrolases
Family:Acetylcholinesterase-like
63d1yrza2



not modelled 9.0 11
Fold:5-bladed beta-propeller
Superfamily:Arabinanase/levansucrase/invertase
Family:alpha-L-arabinanase-like
64c2w6cX_



not modelled 8.8 15
PDB header:hydrolase
Chain: X: PDB Molecule:acetylcholinesterase;
PDBTitle: ache in complex with a bis-(-)-nor-meptazinol derivative
65c5zc2B_



not modelled 8.8 15
PDB header:flavoprotein
Chain: B: PDB Molecule:p-hydroxyphenylacetate 3-hydroxylase, reductase component;
PDBTitle: acinetobacter baumannii p-hydroxyphenylacetate 3-hydroxylase (hpah),2 reductase component (c1)
66c4qt6A_



not modelled 8.7 7
PDB header:transport protein
Chain: A: PDB Molecule:probable e3 ubiquitin-protein ligase herc1;
PDBTitle: crystal structure of the spry domain of human herc1
67c2m2kA_



not modelled 8.5 35
PDB header:transport protein
Chain: A: PDB Molecule:hasb protein;
PDBTitle: the structure of hasb ctd
68d2gskb1



not modelled 8.4 29
Fold:TolA/TonB C-terminal domain
Superfamily:TolA/TonB C-terminal domain
Family:TonB
69d1gz7a_



not modelled 8.3 11
Fold:alpha/beta-Hydrolases
Superfamily:alpha/beta-Hydrolases
Family:Fungal lipases
70c4fbrA_



not modelled 8.1 25
PDB header:carbohydrate binding protein
Chain: A: PDB Molecule:myxobacterial hemagglutinin;
PDBTitle: crystal structure of the myxococcus xanthus hemagglutinin (mbha)
71d2fnjb1



not modelled 8.1 18
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ubiquitin-related
72c5jiaH_



not modelled 7.8 13
PDB header:ran-binding protein
Chain: H: PDB Molecule:ran-binding protein 10;
PDBTitle: the crystal structure of ius-spry domain from ranbp10
73d1pjwa_



not modelled 7.4 18
Fold:Immunoglobulin-like beta-sandwich
Superfamily:E set domains
Family:Class II viral fusion proteins C-terminal domain
74c6a4mA_



not modelled 7.4 25
PDB header:hydrolase
Chain: A: PDB Molecule:uric acid degradation bifunctional protein pucl;
PDBTitle: structure of urate oxidase from bacillus subtilis 168
75d2h7ca1



not modelled 7.2 18
Fold:alpha/beta-Hydrolases
Superfamily:alpha/beta-Hydrolases
Family:Acetylcholinesterase-like
76c5b42A_



not modelled 6.9 20
PDB header:dna binding protein
Chain: A: PDB Molecule:dna mismatch repair protein mutl;
PDBTitle: crystal structure of the c-terminal endonuclease domain of aquifex2 aeolicus mutl.
77d1inva_



not modelled 6.8 17
Fold:6-bladed beta-propeller
Superfamily:Sialidases
Family:Sialidases (neuraminidases)
78d1j2ga2



not modelled 6.7 25
Fold:T-fold
Superfamily:Tetrahydrobiopterin biosynthesis enzymes-like
Family:Urate oxidase (uricase)
79d2ibaa2



not modelled 6.6 33
Fold:T-fold
Superfamily:Tetrahydrobiopterin biosynthesis enzymes-like
Family:Urate oxidase (uricase)
80c4mj3B_



not modelled 6.5 17
PDB header:hydrolase
Chain: B: PDB Molecule:haloalkane dehalogenase;
PDBTitle: haloalkane dehalogenase dmra from mycobacterium rhodesiae js60
81c4hizA_



not modelled 6.2 19
PDB header:hydrolase,viral protein
Chain: A: PDB Molecule:endosialidase;
PDBTitle: phage phi92 endosialidase
82d1xoya_



not modelled 6.2 17
Fold:Galactose-binding domain-like
Superfamily:Galactose-binding domain-like
Family:Hypothetical protein AT3g04780/F7O18 27
83c5c33B_



not modelled 6.1 14
PDB header:contractile protein
Chain: B: PDB Molecule:ryanodine receptor 2;
PDBTitle: crystal structure of mouse ryanodine receptor 2 spry1 domain
84c6qe7A_



not modelled 6.1 11
PDB header:sugar binding protein
Chain: A: PDB Molecule:anti-sigma factor domain-containing protein;
PDBTitle: anti-sigma factor domain-containing protein
85c4eigB_



not modelled 5.9 8
PDB header:oxidoreductase/immune system
Chain: B: PDB Molecule:ca1698 camel antibody fragment;
PDBTitle: ca1698 camel antibody fragment in complex with dhfr
86d2esve1



not modelled 5.8 15
Fold:Immunoglobulin-like beta-sandwich
Superfamily:Immunoglobulin
Family:V set domains (antibody variable domain-like)
87c3ktbD_



not modelled 5.8 71
PDB header:transcription regulator
Chain: D: PDB Molecule:arsenical resistance operon trans-acting repressor;
PDBTitle: crystal structure of arsenical resistance operon trans-acting2 repressor from bacteroides vulgatus atcc 8482
88d1igih1



not modelled 5.7 7
Fold:Immunoglobulin-like beta-sandwich
Superfamily:Immunoglobulin
Family:V set domains (antibody variable domain-like)
89d43c9b_



not modelled 5.6 13
Fold:Immunoglobulin-like beta-sandwich
Superfamily:Immunoglobulin
Family:V set domains (antibody variable domain-like)
90c3tojA_



not modelled 5.6 14
PDB header:transcription
Chain: A: PDB Molecule:set1/ash2 histone methyltransferase complex subunit ash2;
PDBTitle: structure of the spry domain of human ash2l
91c2ys2A_



not modelled 5.6 16
PDB header:transferase
Chain: A: PDB Molecule:cytoplasmic tyrosine-protein kinase bmx;
PDBTitle: solution structure of the btk motif of human cytoplasmic2 tyrosine-protein kinase bmx
92d1bcoa1



not modelled 5.6 4
Fold:mu transposase, C-terminal domain
Superfamily:mu transposase, C-terminal domain
Family:mu transposase, C-terminal domain
93d1u07a_



not modelled 5.4 29
Fold:TolA/TonB C-terminal domain
Superfamily:TolA/TonB C-terminal domain
Family:TonB
94c3npfB_



not modelled 5.4 43
PDB header:hydrolase
Chain: B: PDB Molecule:putative dipeptidyl-peptidase vi;
PDBTitle: crystal structure of a putative dipeptidyl-peptidase vi (bacova_00612)2 from bacteroides ovatus at 1.72 a resolution
95c5lw8A_



not modelled 5.3 35
PDB header:metal transport
Chain: A: PDB Molecule:protein tonb;
PDBTitle: nmr solution structure of helicobacter pylori tonb-ctd (residues 194-2 285)
96c2kaoA_



not modelled 5.3 18
PDB header:oxidoreductase
Chain: A: PDB Molecule:methionine-r-sulfoxide reductase b1;
PDBTitle: structure of reduced mouse methionine sulfoxide reductase b12 (sec95cys mutant)
97c2xivA_



not modelled 5.2 29
PDB header:structural protein
Chain: A: PDB Molecule:hypothetical invasion protein;
PDBTitle: structure of rv1477, hypothetical invasion protein of mycobacterium2 tuberculosis
98d1w7ab4



not modelled 5.1 33
Fold:MutS N-terminal domain-like
Superfamily:DNA repair protein MutS, domain I
Family:DNA repair protein MutS, domain I
99c4ffyH_



not modelled 5.1 10
PDB header:immune system/viral protein
Chain: H: PDB Molecule:denv1-e111 single chain variable fragment (heavy chain);
PDBTitle: crystal structure of denv1-e111 single chain variable fragment bound2 to denv-1 diii, strain 16007.

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