Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2331A_(-)_2604750_2605088
DateMon Aug 5 13:25:48 BST 2019
Unique Job ID64cfb4a6b55ad9f2
SequenceMKGHLATFGH ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:28.910 Y:32.253 Z:27.242
Model (left) based on template c3qftA_
Top template information
PDB header:oxidoreductase
Chain: A: PDB Molecule:nadph--cytochrome p450 reductase;
PDBTitle: crystal structure of nadph-cytochrome p450 reductase (fad/nadph domain2 and r457h mutant)
Confidence and coverage
Confidence: 94.9% Coverage: 51%
57 residues ( 51% of your sequence) have been modelled with 94.9% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
3D viewing
Interactive 3D view in JSmol
For other options to view your downloaded structure offline see the FAQ

Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3qftA_



94.9 26
PDB header:oxidoreductase
Chain: A: PDB Molecule:nadph--cytochrome p450 reductase;
PDBTitle: crystal structure of nadph-cytochrome p450 reductase (fad/nadph domain2 and r457h mutant)
2c2qtzA_



94.2 25
PDB header:oxidoreductase
Chain: A: PDB Molecule:methionine synthase reductase;
PDBTitle: crystal structure of the nadp+-bound fad-containing fnr-like module of2 human methionine synthase reductase
3c6j7aB_



93.9 28
PDB header:oxidoreductase
Chain: B: PDB Molecule:heme oxygenase 1,nadph--cytochrome p450 reductase;
PDBTitle: fusion protein of heme oxygenase-1 and nadph cytochrome p450 reductase2 (17aa)
4c2bpoA_



93.8 28
PDB header:reductase
Chain: A: PDB Molecule:nadph-cytochrom p450 reductase;
PDBTitle: crystal structure of the yeast cpr triple mutant: d74g, y75f, k78a.
5c1ddiA_



93.7 32
PDB header:oxidoreductase
Chain: A: PDB Molecule:sulfite reductase [nadph] flavoprotein alpha-component;
PDBTitle: crystal structure of sir-fp60
6c6efvA_



93.1 32
PDB header:flavoprotein
Chain: A: PDB Molecule:sulfite reductase [nadph] flavoprotein alpha-component;
PDBTitle: the nadph-dependent sulfite reductase flavoprotein adopts an extended2 conformation that is unique to this diflavin reductase
7c5gxuA_



92.4 30
PDB header:oxidoreductase
Chain: A: PDB Molecule:nadph--cytochrome p450 reductase 2;
PDBTitle: cystal structure of arabidopsis atr2
8c1j9zB_



92.0 28
PDB header:oxidoreductase
Chain: B: PDB Molecule:nadph-cytochrome p450 reductase;
PDBTitle: cypor-w677g
9c1f20A_



91.6 23
PDB header:oxidoreductase
Chain: A: PDB Molecule:nitric-oxide synthase;
PDBTitle: crystal structure of rat neuronal nitric-oxide synthase fad/nadp+2 domain at 1.9a resolution.
10c4dqkA_



91.4 25
PDB header:oxidoreductase
Chain: A: PDB Molecule:bifunctional p-450/nadph-p450 reductase;
PDBTitle: crystal structure of the fad binding domain of cytochrome p450 bm3
11d1ddga2



88.6 32
Fold:Ferredoxin reductase-like, C-terminal NADP-linked domain
Superfamily:Ferredoxin reductase-like, C-terminal NADP-linked domain
Family:NADPH-cytochrome p450 reductase-like
12d1ja1a3



88.1 28
Fold:Ferredoxin reductase-like, C-terminal NADP-linked domain
Superfamily:Ferredoxin reductase-like, C-terminal NADP-linked domain
Family:NADPH-cytochrome p450 reductase-like
13c1tllA_



87.6 21
PDB header:oxidoreductase
Chain: A: PDB Molecule:nitric-oxide synthase, brain;
PDBTitle: crystal structure of rat neuronal nitric-oxide synthase2 reductase module at 2.3 a resolution.
14d1f20a2



80.8 26
Fold:Ferredoxin reductase-like, C-terminal NADP-linked domain
Superfamily:Ferredoxin reductase-like, C-terminal NADP-linked domain
Family:NADPH-cytochrome p450 reductase-like
15c4u3qA_



56.7 67
PDB header:lipid binding protein
Chain: A: PDB Molecule:17 kda lipoprotein;
PDBTitle: crystal structure of recombinant tp0435 from treponema pallidum
16c6drfA_



55.8 34
PDB header:signaling protein
Chain: A: PDB Molecule:protein rd3;
PDBTitle: structure of human retinal degeneration 3(rd3) protein
17c1fncA_



45.2 19
PDB header:oxidoreductase (nadp+(a),ferredoxin(a))
Chain: A: PDB Molecule:ferredoxin-nadp+ reductase;
PDBTitle: refined crystal structure of spinach ferredoxin reductase2 at 1.7 angstroms resolution: oxidized, reduced, and 2'-3 phospho-5'-amp bound states
18c1jb9A_



45.0 16
PDB header:oxidoreductase
Chain: A: PDB Molecule:ferredoxin-nadp reductase;
PDBTitle: crystal structure of the ferredoxin:nadp+ reductase from maize root at2 1.7 angstroms
19d1jb9a2



36.2 16
Fold:Ferredoxin reductase-like, C-terminal NADP-linked domain
Superfamily:Ferredoxin reductase-like, C-terminal NADP-linked domain
Family:Reductases
20c2rc5D_



35.2 15
PDB header:oxidoreductase
Chain: D: PDB Molecule:ferredoxin-nadp reductase;
PDBTitle: refined structure of fnr from leptospira interrogans
21c1qgyA_



not modelled 34.8 19
PDB header:oxidoreductase
Chain: A: PDB Molecule:ferredoxin--nadp+ reductase;
PDBTitle: ferredoxin:nadp+ reductase mutant with lys 75 replaced by glu (k75e)
22c4nexA_



not modelled 32.5 20
PDB header:transferase
Chain: A: PDB Molecule:acetylglutamate kinase;
PDBTitle: structure of the n-acetyltransferase domain of x. fastidiosa nags/k
23d2proc1



not modelled 31.5 33
Fold:Alpha-lytic protease prodomain-like
Superfamily:Alpha-lytic protease prodomain
Family:Alpha-lytic protease prodomain
24d1sm4a2



not modelled 27.5 19
Fold:Ferredoxin reductase-like, C-terminal NADP-linked domain
Superfamily:Ferredoxin reductase-like, C-terminal NADP-linked domain
Family:Reductases
25d1wi3a_



not modelled 25.9 41
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Homeodomain
26d1dvoa_



not modelled 24.1 32
Fold:FinO-like
Superfamily:FinO-like
Family:FinO-like
27d1qfza2



not modelled 24.0 23
Fold:Ferredoxin reductase-like, C-terminal NADP-linked domain
Superfamily:Ferredoxin reductase-like, C-terminal NADP-linked domain
Family:Reductases
28c3ltiA_



not modelled 18.3 100
PDB header:transferase
Chain: A: PDB Molecule:dna-directed rna polymerase subunit beta;
PDBTitle: crystal structure of the escherichia coli rna polymerase beta subunit2 beta2-betai4 domains
29d1fnda2



not modelled 18.0 19
Fold:Ferredoxin reductase-like, C-terminal NADP-linked domain
Superfamily:Ferredoxin reductase-like, C-terminal NADP-linked domain
Family:Reductases
30c2b5oA_



not modelled 12.9 13
PDB header:oxidoreductase
Chain: A: PDB Molecule:ferredoxin--nadp reductase;
PDBTitle: ferredoxin-nadp reductase
31d1s3ia2



not modelled 12.2 60
Fold:Formyltransferase
Superfamily:Formyltransferase
Family:Formyltransferase
32d1ei5a1



not modelled 11.6 46
Fold:Streptavidin-like
Superfamily:D-aminopeptidase, middle and C-terminal domains
Family:D-aminopeptidase, middle and C-terminal domains
33c3kcqA_



not modelled 11.3 50
PDB header:transferase
Chain: A: PDB Molecule:phosphoribosylglycinamide formyltransferase;
PDBTitle: crystal structure of phosphoribosylglycinamide formyltransferase from2 anaplasma phagocytophilum
34c3shgB_



not modelled 11.2 50
PDB header:transferase/protein binding
Chain: B: PDB Molecule:vbha;
PDBTitle: vbht fic protein from bartonella schoenbuchensis in complex with vbha2 antitoxin
35d2bw0a2



not modelled 10.9 60
Fold:Formyltransferase
Superfamily:Formyltransferase
Family:Formyltransferase
36c1yrwA_



not modelled 9.7 60
PDB header:transferase
Chain: A: PDB Molecule:protein arna;
PDBTitle: crystal structure of e.coli arna transformylase domain
37d1fmta2



not modelled 9.6 50
Fold:Formyltransferase
Superfamily:Formyltransferase
Family:Formyltransferase
38c1zghA_



not modelled 9.5 50
PDB header:transferase
Chain: A: PDB Molecule:methionyl-trna formyltransferase;
PDBTitle: methionyl-trna formyltransferase from clostridium thermocellum
39d1zgha2



not modelled 9.5 50
Fold:Formyltransferase
Superfamily:Formyltransferase
Family:Formyltransferase
40c4s1nA_



not modelled 9.4 67
PDB header:transferase
Chain: A: PDB Molecule:phosphoribosylglycinamide formyltransferase;
PDBTitle: the crystal structure of phosphoribosylglycinamide formyltransferase2 from streptococcus pneumoniae tigr4
41c3aufA_



not modelled 8.5 56
PDB header:transferase
Chain: A: PDB Molecule:glycinamide ribonucleotide transformylase 1;
PDBTitle: crystal structure of glycinamide ribonucleotide transformylase 1 from2 symbiobacterium toebii
42c5uaiA_



not modelled 8.4 50
PDB header:transferase
Chain: A: PDB Molecule:methionyl-trna formyltransferase;
PDBTitle: crystal structure of methionyl-trna formyltransferase from pseudomonas2 aeruginosa
43c3tqrA_



not modelled 8.4 60
PDB header:transferase
Chain: A: PDB Molecule:phosphoribosylglycinamide formyltransferase;
PDBTitle: structure of the phosphoribosylglycinamide formyltransferase (purn) in2 complex with ches from coxiella burnetii
44c3iz5d_



not modelled 8.3 75
PDB header:ribosome
Chain: D: PDB Molecule:60s ribosomal protein l4 (l4p);
PDBTitle: localization of the large subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome
45c3izrd_



not modelled 8.3 75
PDB header:ribosome
Chain: D: PDB Molecule:60s ribosomal protein l4 (l4p);
PDBTitle: localization of the large subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome
46c6ci2A_



not modelled 8.2 40
PDB header:transferase
Chain: A: PDB Molecule:formyltransferase psej;
PDBTitle: crystal structure of the formyltransferase psej from anoxybacillus2 kamchatkensis
47c3tqqA_



not modelled 8.1 56
PDB header:transferase
Chain: A: PDB Molecule:methionyl-trna formyltransferase;
PDBTitle: structure of the methionyl-trna formyltransferase (fmt) from coxiella2 burnetii
48c4ds3A_



not modelled 7.9 50
PDB header:transferase
Chain: A: PDB Molecule:phosphoribosylglycinamide formyltransferase;
PDBTitle: crystal structure of phosphoribosylglycinamide formyltransferase from2 brucella melitensis
49c3rfoA_



not modelled 7.8 50
PDB header:transferase
Chain: A: PDB Molecule:methionyl-trna formyltransferase;
PDBTitle: crystal structure of methyionyl-trna formyltransferase from bacillus2 anthracis
50c4npgA_



not modelled 7.6 43
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative lipoprotein;
PDBTitle: crystal structure of a hypothetical protein (bt1938) from bacteroides2 thetaiotaomicron vpi-5482 at 2.50 a resolution
51c2ibjA_



not modelled 7.2 24
PDB header:electron transport
Chain: A: PDB Molecule:cytochrome b5;
PDBTitle: structure of house fly cytochrome b5
52c1fmtA_



not modelled 7.1 56
PDB header:formyltransferase
Chain: A: PDB Molecule:methionyl-trna fmet formyltransferase;
PDBTitle: methionyl-trnafmet formyltransferase from escherichia coli
53c5vytD_



not modelled 7.1 78
PDB header:transferase
Chain: D: PDB Molecule:gdp-mannose 4,6-dehydratase / gdp-4-amino-4,6-dideoxy-d-
PDBTitle: crystal structure of the wbkc n-formyltransferase (f142a variant) from2 brucella melitensis
54c4faoI_



not modelled 7.1 39
PDB header:signaling protein/signaling protein
Chain: I: PDB Molecule:serine/threonine-protein kinase receptor r3;
PDBTitle: specificity and structure of a high affinity activin-like 1 (alk1)2 signaling complex
55d1jkxa_



not modelled 7.1 60
Fold:Formyltransferase
Superfamily:Formyltransferase
Family:Formyltransferase
56c5ujhA_



not modelled 7.0 83
PDB header:cytokine
Chain: A: PDB Molecule:granulin;
PDBTitle: ov-grn12-34
57c5jsdB_



not modelled 7.0 50
PDB header:viral protein
Chain: B: PDB Molecule:phiab6 tailspike;
PDBTitle: crystal structure of phiab6 tailspike in complex with five-repeated2 oligosaccharides of acinetobacter baumannii surface polysaccharide
58d3proc1



not modelled 6.9 54
Fold:Alpha-lytic protease prodomain-like
Superfamily:Alpha-lytic protease prodomain
Family:Alpha-lytic protease prodomain
59c5ujgA_



not modelled 6.7 83
PDB header:cytokine
Chain: A: PDB Molecule:granulin;
PDBTitle: ovgrn12-35_3s
60c3q0iA_



not modelled 6.6 56
PDB header:transferase
Chain: A: PDB Molecule:methionyl-trna formyltransferase;
PDBTitle: methionyl-trna formyltransferase from vibrio cholerae
61d2c4fl3



not modelled 6.5 73
Fold:GLA-domain
Superfamily:GLA-domain
Family:GLA-domain
62c4nv1D_



not modelled 6.5 50
PDB header:transferase
Chain: D: PDB Molecule:formyltransferase;
PDBTitle: crystal structure of a 4-n formyltransferase from francisella2 tularensis
63c5al6A_



not modelled 6.4 50
PDB header:structural protein
Chain: A: PDB Molecule:anastral spindle 2;
PDBTitle: central coiled-coil domain (cccd) of drosophila melanogaster ana2. a2 natural, parallel, tetrameric coiled-coil bundle.
64c3et4A_



not modelled 6.4 16
PDB header:hydrolase
Chain: A: PDB Molecule:outer membrane protein p4, nadp phosphatase;
PDBTitle: structure of recombinant haemophilus influenzae e(p4) acid phosphatase
65d1cyoa_



not modelled 6.3 24
Fold:Cytochrome b5-like heme/steroid binding domain
Superfamily:Cytochrome b5-like heme/steroid binding domain
Family:Cytochrome b5
66c4b8nC_



not modelled 6.3 25
PDB header:electron transport
Chain: C: PDB Molecule:cytochrome b5-host origin;
PDBTitle: cytochrome b5 of ostreococcus tauri virus 2
67c4pzuF_



not modelled 6.1 50
PDB header:transferase
Chain: F: PDB Molecule:uncharacterized protein rv3404c/mt3512;
PDBTitle: crystal structure of a putative uncharacterize protein rv3404c and2 likely sugar n-formyltransferase from mycobacterium tuberculosis
68c3tdqB_



not modelled 6.0 24
PDB header:cell adhesion
Chain: B: PDB Molecule:pily2 protein;
PDBTitle: crystal structure of a fimbrial biogenesis protein pily22 (pily2_pa4555) from pseudomonas aeruginosa pao1 at 2.10 a resolution
69c6gmaA_



not modelled 5.9 15
PDB header:protein binding
Chain: A: PDB Molecule:rb1-inducible coiled-coil protein 1;
PDBTitle: crystal structure of the fip200 c-terminal region
70c3p9xB_



not modelled 5.8 56
PDB header:transferase
Chain: B: PDB Molecule:phosphoribosylglycinamide formyltransferase;
PDBTitle: crystal structure of phosphoribosylglycinamide formyltransferase from2 bacillus halodurans
71d1rgoa2



not modelled 5.8 64
Fold:CCCH zinc finger
Superfamily:CCCH zinc finger
Family:CCCH zinc finger
72c3hrdF_



not modelled 5.8 22
PDB header:oxidoreductase
Chain: F: PDB Molecule:nicotinate dehydrogenase medium molybdopterin
PDBTitle: crystal structure of nicotinate dehydrogenase
73c2kc8B_



not modelled 5.7 64
PDB header:toxin/toxin repressor
Chain: B: PDB Molecule:antitoxin relb;
PDBTitle: structure of e. coli toxin rele (r81a/r83a) mutant in2 complex with antitoxin relbc (k47-l79) peptide
74c2ywrA_



not modelled 5.7 44
PDB header:transferase
Chain: A: PDB Molecule:phosphoribosylglycinamide formyltransferase;
PDBTitle: crystal structure of gar transformylase from aquifex aeolicus
75c3o1lB_



not modelled 5.7 44
PDB header:hydrolase
Chain: B: PDB Molecule:formyltetrahydrofolate deformylase;
PDBTitle: crystal structure of a formyltetrahydrofolate deformylase (pspto_4314)2 from pseudomonas syringae pv. tomato str. dc3000 at 2.20 a resolution
76c4lzxB_



not modelled 5.5 38
PDB header:metal binding protein
Chain: B: PDB Molecule:iq domain-containing protein g;
PDBTitle: complex of iqcg and ca2+-free cam
77d1meoa_



not modelled 5.5 70
Fold:Formyltransferase
Superfamily:Formyltransferase
Family:Formyltransferase
78d1axib1



not modelled 5.3 19
Fold:Immunoglobulin-like beta-sandwich
Superfamily:Fibronectin type III
Family:Fibronectin type III
79c2i34B_



not modelled 5.2 21
PDB header:hydrolase
Chain: B: PDB Molecule:acid phosphatase;
PDBTitle: the crystal structure of class c acid phosphatase from bacillus2 anthracis with tungstate bound

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite