Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2333c_(-)_2606718_2608331
DateMon Aug 5 13:25:48 BST 2019
Unique Job IDdd014bf23ec246a8
SequenceMNRTQLLTLI ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:51.452 Y:69.971 Z:65.014
Model (left) based on template d1pw4a_
Top template information
Fold:MFS general substrate transporter
Superfamily:MFS general substrate transporter
Family:Glycerol-3-phosphate transporter
Confidence and coverage
Confidence:100.0% Coverage: 76%
407 residues ( 76% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
502 residues ( 93%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d1pw4a_
100.0 13
Fold:MFS general substrate transporter
Superfamily:MFS general substrate transporter
Family:Glycerol-3-phosphate transporter
2c4zp0A_
100.0 18
PDB header:transport protein
Chain: A: PDB Molecule:multidrug transporter mdfa;
PDBTitle: crystal structure of e. coli multidrug transporter mdfa in complex2 with deoxycholate
3c3wdoA_
100.0 17
PDB header:transport protein
Chain: A: PDB Molecule:mfs transporter;
PDBTitle: structure of e. coli yajr transporter
4c6e9oA_
100.0 14
PDB header:membrane protein
Chain: A: PDB Molecule:d-galactonate transport;
PDBTitle: e. coli d-galactonate:proton symporter mutant e133q in the outward2 substrate-bound form
5c4ldsB_
100.0 16
PDB header:transport protein, membrane protein
Chain: B: PDB Molecule:bicyclomycin resistance protein tcab;
PDBTitle: the inward-facing structure of the glucose transporter from2 staphylococcus epidermidis
6c4cl5B_
100.0 14
PDB header:transport protein
Chain: B: PDB Molecule:nitrate transporter 1.1;
PDBTitle: crystal structure of the nitrate transporter nrt1.1 from2 arabidopsis thaliana in complex with nitrate.
7c6h7dA_
100.0 14
PDB header:membrane protein
Chain: A: PDB Molecule:sugar transport protein 10;
PDBTitle: crystal structure of a. thaliana sugar transport protein 10 in complex2 with glucose in the outward occluded state
8c6gs7A_
100.0 13
PDB header:membrane protein
Chain: A: PDB Molecule:dipeptide and tripeptide permease a;
PDBTitle: crystal structure of peptide transporter dtpa-nanobody in glycine2 buffer
9c4ikyA_
100.0 12
PDB header:transport protein
Chain: A: PDB Molecule:di-tripeptide abc transporter (permease);
PDBTitle: crystal structure of peptide transporter pot (e310q mutant) in complex2 with sulfate
10c5c65A_
100.0 12
PDB header:transport protein
Chain: A: PDB Molecule:solute carrier family 2, facilitated glucose transporter
PDBTitle: structure of the human glucose transporter glut3 / slc2a3
11c4apsB_
100.0 12
PDB header:transport protein
Chain: B: PDB Molecule:di-or tripeptide h+ symporter;
PDBTitle: crystal structure of a pot family peptide transporter in an inward2 open conformation.
12c2gfpA_
100.0 21
PDB header:membrane protein
Chain: A: PDB Molecule:multidrug resistance protein d;
PDBTitle: structure of the multidrug transporter emrd from2 escherichia coli
13c4gbzA_
100.0 13
PDB header:transport protein
Chain: A: PDB Molecule:d-xylose-proton symporter;
PDBTitle: the structure of the mfs (major facilitator superfamily) proton:xylose2 symporter xyle bound to d-glucose
14c6g9xB_
100.0 15
PDB header:membrane protein
Chain: B: PDB Molecule:major facilitator superfamily mfs_1;
PDBTitle: crystal structure of a mfs transporter at 2.54 angstroem resolution
15c6exsA_
100.0 15
PDB header:membrane protein
Chain: A: PDB Molecule:peptide abc transporter permease;
PDBTitle: crystal structure of a pot family transporter in complex with2 thioalcohol conjugated peptide.
16c6ei3A_
100.0 13
PDB header:membrane protein
Chain: A: PDB Molecule:proton-dependent oligopeptide transporter family protein;
PDBTitle: crystal structure of auto inhibited pot family peptide transporter
17c4j05A_
100.0 19
PDB header:transport protein
Chain: A: PDB Molecule:phosphate transporter;
PDBTitle: crystal structure of a eukaryotic phosphate transporter
18c4ybqB_
100.0 12
PDB header:transport protein/immune system
Chain: B: PDB Molecule:solute carrier family 2, facilitated glucose transporter
PDBTitle: rat glut5 with fv in the outward-open form
19c3o7pA_
100.0 15
PDB header:transport protein
Chain: A: PDB Molecule:l-fucose-proton symporter;
PDBTitle: crystal structure of the e.coli fucose:proton symporter, fucp (n162a)
20c4w6vA_
100.0 12
PDB header:transport protein
Chain: A: PDB Molecule:di-/tripeptide transporter;
PDBTitle: crystal structure of a peptide transporter from yersinia2 enterocolitica at 3 a resolution
21c2xutC_
not modelled 100.0 12
PDB header:transport protein
Chain: C: PDB Molecule:proton/peptide symporter family protein;
PDBTitle: crystal structure of a proton dependent oligopeptide (pot) family2 transporter.
22d1pv7a_
not modelled 100.0 13
Fold:MFS general substrate transporter
Superfamily:MFS general substrate transporter
Family:LacY-like proton/sugar symporter
23c1pv7B_
not modelled 100.0 13
PDB header:transport protein
Chain: B: PDB Molecule:lactose permease;
PDBTitle: crystal structure of lactose permease with tdg
24c4pypA_
not modelled 100.0 13
PDB header:transport protein
Chain: A: PDB Molecule:solute carrier family 2, facilitated glucose transporter
PDBTitle: crystal structure of the human glucose transporter glut1
25c4lepB_
not modelled 100.0 11
PDB header:membrane protein, tranport protein
Chain: B: PDB Molecule:proton:oligopeptide symporter pot family;
PDBTitle: structural insights into substrate recognition in proton dependent2 oligopeptide transporters
26c4q65A_
not modelled 100.0 13
PDB header:transport protein
Chain: A: PDB Molecule:dipeptide permease d;
PDBTitle: structure of the e. coli peptide transporter ybgh
27c4iu8A_
not modelled 100.0 13
PDB header:transport protein
Chain: A: PDB Molecule:nitrite extrusion protein 2;
PDBTitle: crystal structure of a membrane transporter (selenomethionine2 derivative)
28c4iu9A_
not modelled 100.0 15
PDB header:transport protein
Chain: A: PDB Molecule:nitrite extrusion protein 2;
PDBTitle: crystal structure of a membrane transporter
29c5aynA_
not modelled 100.0 18
PDB header:transport protein
Chain: A: PDB Molecule:solute carrier family 39 (iron-regulated transporter);
PDBTitle: crystal structure of a bacterial homologue of iron transporter2 ferroportin in outward-facing state
30c5aymA_
not modelled 99.9 20
PDB header:transport protein
Chain: A: PDB Molecule:solute carrier family 39 (iron-regulated transporter);
PDBTitle: crystal structure of a bacterial homologue of iron transporter2 ferroportin in outward-facing state with soaked iron
31c4m64D_
not modelled 99.8 11
PDB header:transport protein
Chain: D: PDB Molecule:melibiose carrier protein;
PDBTitle: 3d crystal structure of na+/melibiose symporter of salmonella2 typhimurium
32c6ob7A_
not modelled 99.8 12
PDB header:transport protein
Chain: A: PDB Molecule:equilibrative nucleoside transporter 1;
PDBTitle: human equilibrative nucleoside transporter-1, dilazep bound
33c6nbxG_
not modelled 65.3 8
PDB header:oxidoreductase
Chain: G: PDB Molecule:nadh-quinone oxidoreductase subunit j;
PDBTitle: t.elongatus ndh (data-set 2)
34c4r0cB_
not modelled 62.4 9
PDB header:membrane protein
Chain: B: PDB Molecule:abgt putative transporter family;
PDBTitle: crystal structure of the alcanivorax borkumensis ydah transporter2 reveals an unusual topology
35c3b9yA_
not modelled 56.6 13
PDB header:transport protein
Chain: A: PDB Molecule:ammonium transporter family rh-like protein;
PDBTitle: crystal structure of the nitrosomonas europaea rh protein
36c6cfwI_
not modelled 34.0 6
PDB header:membrane protein
Chain: I: PDB Molecule:mbh subunit;
PDBTitle: cryoem structure of a respiratory membrane-bound hydrogenase
37c3qnqD_
not modelled 28.9 5
PDB header:membrane protein, transport protein
Chain: D: PDB Molecule:pts system, cellobiose-specific iic component;
PDBTitle: crystal structure of the transporter chbc, the iic component from the2 n,n'-diacetylchitobiose-specific phosphotransferase system
38c4djiA_
not modelled 21.1 14
PDB header:transport protein
Chain: A: PDB Molecule:probable glutamate/gamma-aminobutyrate antiporter;
PDBTitle: structure of glutamate-gaba antiporter gadc
39c5iwsA_
not modelled 21.0 11
PDB header:transferase
Chain: A: PDB Molecule:protein-n(pi)-phosphohistidine-sugar phosphotransferase
PDBTitle: crystal structure of the transporter malt, the eiic domain from the2 maltose-specific phosphotransferase system
40d2aw2a1
not modelled 17.2 63
Fold:Immunoglobulin-like beta-sandwich
Superfamily:Immunoglobulin
Family:V set domains (antibody variable domain-like)
41c2h31A_
not modelled 17.2 67
PDB header:ligase, lyase
Chain: A: PDB Molecule:multifunctional protein ade2;
PDBTitle: crystal structure of human paics, a bifunctional carboxylase and2 synthetase in purine biosynthesis
42d1xaua_
not modelled 16.4 50
Fold:Immunoglobulin-like beta-sandwich
Superfamily:Immunoglobulin
Family:I set domains
43c2g9pA_
not modelled 16.1 21
PDB header:antimicrobial protein
Chain: A: PDB Molecule:antimicrobial peptide latarcin 2a;
PDBTitle: nmr structure of a novel antimicrobial peptide, latarcin 2a,2 from spider (lachesana tarabaevi) venom
44c3a0bT_
not modelled 12.6 25
PDB header:electron transport
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: crystal structure of br-substituted photosystem ii complex
45c3arct_
not modelled 12.6 25
PDB header:electron transport, photosynthesis
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: crystal structure of oxygen-evolving photosystem ii at 1.9 angstrom2 resolution
46c4ja0A_
not modelled 12.2 67
PDB header:protein binding
Chain: A: PDB Molecule:phosphoribosylaminoimidazole carboxylase;
PDBTitle: crystal structure of the invertebrate bi-functional purine2 biosynthesis enzyme paics at 2.8 a resolution
47c3prrT_
not modelled 11.2 22
PDB header:photosynthesis
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: crystal structure of cyanobacterial photosystem ii in complex with2 terbutryn (part 2 of 2). this file contains second monomer of psii3 dimer
48c3prqT_
not modelled 11.2 22
PDB header:photosynthesis
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: crystal structure of cyanobacterial photosystem ii in complex with2 terbutryn (part 1 of 2). this file contains first monomer of psii3 dimer
49c4fbyg_
not modelled 11.2 22
PDB header:photosynthesis
Chain: G: PDB Molecule:photosystem q(b) protein 1;
PDBTitle: fs x-ray diffraction of photosystem ii
50c4tnkT_
not modelled 11.2 22
PDB header:electron transport,photosynthesis
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: rt xfel structure of photosystem ii 250 microsec after the third2 illumination at 5.2 a resolution
51c4tnjT_
not modelled 11.2 22
PDB header:electron transport,photosynthesis
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: rt xfel structure of photosystem ii 500 ms after the 2nd illumination2 (2f) at 4.5 a resolution
52c4tnhT_
not modelled 11.2 22
PDB header:electron transport,photosynthesis
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: rt xfel structure of photosystem ii in the dark state at 4.9 a2 resolution
53c4fbyT_
not modelled 11.2 22
PDB header:photosynthesis
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: fs x-ray diffraction of photosystem ii
54c4tnkt_
not modelled 11.2 22
PDB header:electron transport,photosynthesis
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: rt xfel structure of photosystem ii 250 microsec after the third2 illumination at 5.2 a resolution
55c4tniT_
not modelled 11.2 22
PDB header:electron transport,photosynthesis
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: rt xfel structure of photosystem ii 500 ms after the third2 illumination at 4.6 a resolution
56c4ixrT_
not modelled 11.2 22
PDB header:photosynthesis
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: rt fs x-ray diffraction of photosystem ii, first illuminated state
57c4tnit_
not modelled 11.2 22
PDB header:electron transport,photosynthesis
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: rt xfel structure of photosystem ii 500 ms after the third2 illumination at 4.6 a resolution
58c4ixrt_
not modelled 11.2 22
PDB header:photosynthesis
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: rt fs x-ray diffraction of photosystem ii, first illuminated state
59c3bz2T_
not modelled 11.2 22
PDB header:electron transport
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: crystal structure of cyanobacterial photosystem ii (part 2 of 2). this2 file contains second monomer of psii dimer
60c4ixqt_
not modelled 11.2 22
PDB header:photosynthesis
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: rt fs x-ray diffraction of photosystem ii, dark state
61c3bz1T_
not modelled 11.2 22
PDB header:electron transport
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: crystal structure of cyanobacterial photosystem ii (part 1 of 2). this2 file contains first monomer of psii dimer
62c4ixqT_
not modelled 11.2 22
PDB header:photosynthesis
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: rt fs x-ray diffraction of photosystem ii, dark state
63c4tnjt_
not modelled 11.2 22
PDB header:electron transport,photosynthesis
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: rt xfel structure of photosystem ii 500 ms after the 2nd illumination2 (2f) at 4.5 a resolution
64c4tnht_
not modelled 11.2 22
PDB header:electron transport,photosynthesis
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: rt xfel structure of photosystem ii in the dark state at 4.9 a2 resolution
65c5xpdA_
not modelled 10.0 11
PDB header:transport protein
Chain: A: PDB Molecule:sugar transporter;
PDBTitle: sugar transporter of atsweet13 in inward-facing state with a substrate2 analog
66c6r5kA_
not modelled 9.8 16
PDB header:rna binding protein
Chain: A: PDB Molecule:pan2-pan3 deadenylation complex catalytic subunit pan2;
PDBTitle: cryo-em structure of a poly(a) rnp bound to the pan2-pan3 deadenylase
67d1dtdb_
not modelled 9.7 32
Fold:Carboxypeptidase inhibitor
Superfamily:Carboxypeptidase inhibitor
Family:Carboxypeptidase inhibitor
68c5mx2T_
not modelled 9.6 25
PDB header:oxidoreductase
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: photosystem ii depleted of the mn4cao5 cluster at 2.55 a resolution
69c2jlnA_
not modelled 9.4 7
PDB header:membrane protein
Chain: A: PDB Molecule:mhp1;
PDBTitle: structure of mhp1, a nucleobase-cation-symport-1 family2 transporter
70c4r1iB_
not modelled 9.2 13
PDB header:membrane protein
Chain: B: PDB Molecule:aminobenzoyl-glutamate transporter;
PDBTitle: structure and function of neisseria gonorrhoeae mtrf illuminates a2 class of antimetabolite efflux pumps
71c4pj0t_
not modelled 9.1 25
PDB header:oxidoreductase, electron transport
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: structure of t.elongatus photosystem ii, rows of dimers crystal2 packing
72c4pj0T_
not modelled 9.1 25
PDB header:oxidoreductase, electron transport
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: structure of t.elongatus photosystem ii, rows of dimers crystal2 packing
73c5mx2t_
not modelled 9.1 25
PDB header:oxidoreductase
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: photosystem ii depleted of the mn4cao5 cluster at 2.55 a resolution
74c4rvyT_
not modelled 9.0 25
PDB header:oxidoreductase
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: serial time resolved crystallography of photosystem ii using a2 femtosecond x-ray laser. the s state after two flashes (s3)
75c5e7ct_
not modelled 9.0 25
PDB header:photosynthesis
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: macromolecular diffractive imaging using imperfect crystals - bragg2 data
76c3a0hT_
not modelled 9.0 25
PDB header:electron transport
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: crystal structure of i-substituted photosystem ii complex
77c5e79t_
not modelled 9.0 25
PDB header:photosynthesis
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: macromolecular diffractive imaging using imperfect crystals
78c3arcT_
not modelled 9.0 25
PDB header:electron transport, photosynthesis
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: crystal structure of oxygen-evolving photosystem ii at 1.9 angstrom2 resolution
79c3a0ht_
not modelled 9.0 25
PDB header:electron transport
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: crystal structure of i-substituted photosystem ii complex
80c3kziT_
not modelled 9.0 25
PDB header:electron transport
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: crystal structure of monomeric form of cyanobacterial photosystem ii
81c4rvyt_
not modelled 9.0 25
PDB header:oxidoreductase
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: serial time resolved crystallography of photosystem ii using a2 femtosecond x-ray laser. the s state after two flashes (s3)
82d2axtt1
not modelled 9.0 25
Fold:Single transmembrane helix
Superfamily:Photosystem II reaction center protein T, PsbT
Family:PsbT-like
83c5e7cT_
not modelled 9.0 25
PDB header:photosynthesis
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: macromolecular diffractive imaging using imperfect crystals - bragg2 data
84c2axtT_
not modelled 9.0 25
PDB header:electron transport
Chain: T: PDB Molecule:photosystem ii reaction center t protein;
PDBTitle: crystal structure of photosystem ii from thermosynechococcus elongatus
85c2axtt_
not modelled 9.0 25
PDB header:electron transport
Chain: T: PDB Molecule:photosystem ii reaction center t protein;
PDBTitle: crystal structure of photosystem ii from thermosynechococcus elongatus
86c5e79T_
not modelled 9.0 25
PDB header:photosynthesis
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: macromolecular diffractive imaging using imperfect crystals
87c1s5lt_
not modelled 9.0 25
PDB header:photosynthesis
Chain: T: PDB Molecule:photosystem ii psbt protein;
PDBTitle: architecture of the photosynthetic oxygen evolving center
88c1s5lT_
not modelled 9.0 25
PDB header:photosynthesis
Chain: T: PDB Molecule:photosystem ii psbt protein;
PDBTitle: architecture of the photosynthetic oxygen evolving center
89d1lghb_
not modelled 9.0 17
Fold:Light-harvesting complex subunits
Superfamily:Light-harvesting complex subunits
Family:Light-harvesting complex subunits
90c4px7A_
not modelled 8.6 16
PDB header:hydrolase
Chain: A: PDB Molecule:phosphatidylglycerophosphatase;
PDBTitle: crystal structure of lipid phosphatase e. coli pgpb
91c6et5u_
not modelled 8.2 21
PDB header:photosynthesis
Chain: U: PDB Molecule:light-harvesting protein b-1015 gamma chain;
PDBTitle: reaction centre light harvesting complex 1 from blc. virids
92c3v5uA_
not modelled 7.5 15
PDB header:metal transport
Chain: A: PDB Molecule:uncharacterized membrane protein mj0091;
PDBTitle: structure of sodium/calcium exchanger from methanocaldococcus2 jannaschii dsm 2661
93c4kppA_
not modelled 7.2 12
PDB header:membrane protein
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of h+/ca2+ exchanger cax
94c5i6cB_
not modelled 7.0 15
PDB header:transport protein
Chain: B: PDB Molecule:uric acid-xanthine permease;
PDBTitle: the structure of the eukaryotic purine/h+ symporter, uapa, in complex2 with xanthine
95c2knpA_
not modelled 6.8 67
PDB header:unknown function
Chain: A: PDB Molecule:mcocc-1;
PDBTitle: isolation and characterization of peptides from momordica2 cochinchinensis seeds.
96c2kncA_
not modelled 6.7 18
PDB header:cell adhesion
Chain: A: PDB Molecule:integrin alpha-iib;
PDBTitle: platelet integrin alfaiib-beta3 transmembrane-cytoplasmic2 heterocomplex
97d2nr9a1
not modelled 6.7 13
Fold:Rhomboid-like
Superfamily:Rhomboid-like
Family:Rhomboid-like
98c5b66T_
not modelled 6.4 26
PDB header:electron transport, photosynthesis
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: crystal structure analysis of photosystem ii complex
99c4il6t_
not modelled 6.3 26
PDB header:electron transport
Chain: T: PDB Molecule:photosystem ii reaction center protein t;
PDBTitle: structure of sr-substituted photosystem ii

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below