Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2337c_(-)_2611879_2612997
DateMon Aug 5 13:25:49 BST 2019
Unique Job ID876db14b69851f70
SequenceMRAGRWGPGM ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:71.129 Y:54.920 Z:47.682
Model (left) based on template c2ymvA_
Top template information
PDB header:oxidoreductase
Chain: A: PDB Molecule:acg nitroreductase;
PDBTitle: structure of reduced m smegmatis 5246, a homologue of m.2 tuberculosis acg
Confidence and coverage
Confidence:100.0% Coverage: 85%
317 residues ( 85% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c2ymvA_



100.0 22
PDB header:oxidoreductase
Chain: A: PDB Molecule:acg nitroreductase;
PDBTitle: structure of reduced m smegmatis 5246, a homologue of m.2 tuberculosis acg
2c3gr3B_



99.7 18
PDB header:flavoprotein
Chain: B: PDB Molecule:nitroreductase;
PDBTitle: crystal structure of a nitroreductase-like family protein (pnba,2 bh06130) from bartonella henselae str. houston-1 at 1.45 a resolution
3c3eo8A_



99.7 12
PDB header:flavoprotein
Chain: A: PDB Molecule:blub-like flavoprotein;
PDBTitle: crystal structure of blub-like flavoprotein (yp_001089088.1) from2 clostridium difficile 630 at 1.74 a resolution
4c2islB_



99.6 21
PDB header:flavoprotein
Chain: B: PDB Molecule:blub;
PDBTitle: blub bound to reduced flavin (fmnh2) and molecular oxygen.2 (clear crystal form)
5c2wzvB_



99.6 18
PDB header:oxidoreductase
Chain: B: PDB Molecule:nfnb protein;
PDBTitle: crystal structure of the fmn-dependent nitroreductase nfnb2 from mycobacterium smegmatis
6c4xomB_



99.6 23
PDB header:unknown function
Chain: B: PDB Molecule:coenzyme f420:l-glutamate ligase;
PDBTitle: coenzyme f420:l-glutamate ligase (fbib) from mycobacterium2 tuberculosis (c-terminal domain).
7c3e39A_



99.5 17
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative nitroreductase;
PDBTitle: crystal structure of a putative nitroreductase in complex with fmn2 (dde_0787) from desulfovibrio desulfuricans subsp. at 1.70 a3 resolution
8c3kwkA_



99.5 15
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative nadh dehydrogenase/nad(p)h nitroreductase;
PDBTitle: crystal structure of putative nadh dehydrogenase/nad(p)h2 nitroreductase (np_809094.1) from bacteroides thetaiotaomicron vpi-3 5482 at 1.54 a resolution
9c3gh8A_



99.5 10
PDB header:oxidoreductase
Chain: A: PDB Molecule:iodotyrosine dehalogenase 1;
PDBTitle: crystal structure of mus musculus iodotyrosine deiodinase (iyd) bound2 to fmn and di-iodotyrosine (dit)
10c5ko8B_



99.5 19
PDB header:oxidoreductase
Chain: B: PDB Molecule:nitroreductase;
PDBTitle: crystal structure of haliscomenobacter hydrossis iodotyrosine2 deiodinase (iyd) bound to fmn and mono-iodotyrosine (i-tyr)
11d1vfra_



99.5 13
Fold:FMN-dependent nitroreductase-like
Superfamily:FMN-dependent nitroreductase-like
Family:NADH oxidase/flavin reductase
12c3gfaB_



99.5 12
PDB header:oxidoreductase
Chain: B: PDB Molecule:putative nitroreductase;
PDBTitle: crystal structure of a putative nitroreductase in complex with fmn2 (cd3205) from clostridium difficile 630 at 1.35 a resolution
13d1bkja_



99.5 12
Fold:FMN-dependent nitroreductase-like
Superfamily:FMN-dependent nitroreductase-like
Family:NADH oxidase/flavin reductase
14c3to0A_



99.5 13
PDB header:oxidoreductase
Chain: A: PDB Molecule:iodotyrosine deiodinase 1;
PDBTitle: crystal structure of mus musculus iodotyrosine deiodinase (iyd) c217a,2 c239a bound to fmn
15d1noxa_



99.4 16
Fold:FMN-dependent nitroreductase-like
Superfamily:FMN-dependent nitroreductase-like
Family:NADH oxidase/flavin reductase
16c3n2sD_



99.4 17
PDB header:oxidoreductase
Chain: D: PDB Molecule:nadph-dependent nitro/flavin reductase;
PDBTitle: structure of nfra1 nitroreductase from b. subtilis
17c2i7hE_



99.4 19
PDB header:oxidoreductase
Chain: E: PDB Molecule:nitroreductase-like family protein;
PDBTitle: crystal structure of the nitroreductase-like family protein from2 bacillus cereus
18c3ek3A_



99.4 15
PDB header:flavoprotein
Chain: A: PDB Molecule:nitroreductase;
PDBTitle: crystal structure of nitroreductase with bound fmn (yp_211706.1) from2 bacteroides fragilis nctc 9343 at 1.70 a resolution
19c5hdjA_



99.4 14
PDB header:oxidoreductase
Chain: A: PDB Molecule:nfra1;
PDBTitle: structure of b. megaterium nfra1
20c4qlyB_



99.4 21
PDB header:oxidoreductase
Chain: B: PDB Molecule:enone reductase cla-er;
PDBTitle: crystal structure of cla-er, a novel enone reductase catalyzing a key2 step of a gut-bacterial fatty acid saturation metabolism,3 biohydrogenation
21d1f5va_



not modelled 99.4 17
Fold:FMN-dependent nitroreductase-like
Superfamily:FMN-dependent nitroreductase-like
Family:NADH oxidase/flavin reductase
22c3m5kA_



not modelled 99.4 14
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative nadh dehydrogenase/nad(p)h nitroreductase;
PDBTitle: crystal structure of putative nadh dehydrogenase/nad(p)h2 nitroreductase (bdi_1728) from parabacteroides distasonis atcc 85033 at 1.86 a resolution
23d1zcha1



not modelled 99.4 19
Fold:FMN-dependent nitroreductase-like
Superfamily:FMN-dependent nitroreductase-like
Family:NADH oxidase/flavin reductase
24d1ykia1



not modelled 99.4 12
Fold:FMN-dependent nitroreductase-like
Superfamily:FMN-dependent nitroreductase-like
Family:NADH oxidase/flavin reductase
25c3bm2B_



not modelled 99.4 14
PDB header:oxidoreductase
Chain: B: PDB Molecule:protein ydja;
PDBTitle: crystal structure of a minimal nitroreductase ydja from escherichia2 coli k12 with and without fmn cofactor
26d1kqba_



not modelled 99.4 13
Fold:FMN-dependent nitroreductase-like
Superfamily:FMN-dependent nitroreductase-like
Family:NADH oxidase/flavin reductase
27c3k6hB_



not modelled 99.4 19
PDB header:oxidoreductase
Chain: B: PDB Molecule:nitroreductase family protein;
PDBTitle: crystal structure of a nitroreductase family protein from2 agrobacterium tumefaciens str. c58
28c5heiE_



not modelled 99.3 20
PDB header:oxidoreductase
Chain: E: PDB Molecule:nfra2;
PDBTitle: structure of b. megaterium nfra2
29c3bemA_



not modelled 99.3 13
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative nad(p)h nitroreductase ydfn;
PDBTitle: crystal structure of putative nitroreductase ydfn (2632848) from2 bacillus subtilis at 1.65 a resolution
30c6czpH_



not modelled 99.3 10
PDB header:oxidoreductase
Chain: H: PDB Molecule:oxygen-insensitive nad(p)h nitroreductase;
PDBTitle: 2.2 angstrom resolution crystal structure oxygen-insensitive nad(p)h-2 dependent nitroreductase nfsb from vibrio vulnificus in complex with3 fmn
31c3ge6B_



not modelled 99.3 24
PDB header:oxidoreductase
Chain: B: PDB Molecule:nitroreductase;
PDBTitle: crystal structure of a putative nitroreductase in complex with fmn2 (exig_2970) from exiguobacterium sibiricum 255-15 at 1.85 a3 resolution
32c3ge5A_



not modelled 99.3 21
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative nad(p)h:fmn oxidoreductase;
PDBTitle: crystal structure of a putative nad(p)h:fmn oxidoreductase (pg0310)2 from porphyromonas gingivalis w83 at 1.70 a resolution
33d2b67a1



not modelled 99.3 14
Fold:FMN-dependent nitroreductase-like
Superfamily:FMN-dependent nitroreductase-like
Family:NADH oxidase/flavin reductase
34c3pxvD_



not modelled 99.3 18
PDB header:oxidoreductase
Chain: D: PDB Molecule:nitroreductase;
PDBTitle: crystal structure of a nitroreductase with bound fmn (dhaf_2018) from2 desulfitobacterium hafniense dcb-2 at 2.30 a resolution
35c3gagB_



not modelled 99.3 13
PDB header:oxidoreductase
Chain: B: PDB Molecule:putative nadh dehydrogenase, nadph nitroreductase;
PDBTitle: crystal structure of a nitroreductase-like protein (smu.346) from2 streptococcus mutans at 1.70 a resolution
36c4eo3A_



not modelled 99.3 20
PDB header:oxidoreductase
Chain: A: PDB Molecule:bacterioferritin comigratory protein/nadh dehydrogenase;
PDBTitle: peroxiredoxin nitroreductase fusion enzyme
37c3eofB_



not modelled 99.3 12
PDB header:oxidoreductase
Chain: B: PDB Molecule:putative oxidoreductase;
PDBTitle: crystal structure of putative oxidoreductase (yp_213212.1) from2 bacteroides fragilis nctc 9343 at 1.99 a resolution
38c2hayD_



not modelled 99.3 19
PDB header:oxidoreductase
Chain: D: PDB Molecule:putative nad(p)h-flavin oxidoreductase;
PDBTitle: the crystal structure of the putative nad(p)h-flavin oxidoreductase2 from streptococcus pyogenes m1 gas
39c3of4A_



not modelled 99.3 14
PDB header:oxidoreductase
Chain: A: PDB Molecule:nitroreductase;
PDBTitle: crystal structure of a fmn/fad- and nad(p)h-dependent nitroreductase2 (nfnb, il2077) from idiomarina loihiensis l2tr at 1.90 a resolution
40c3qdlD_



not modelled 99.3 14
PDB header:oxidoreductase
Chain: D: PDB Molecule:oxygen-insensitive nadph nitroreductase;
PDBTitle: crystal structure of rdxa from helicobacter pyroli
41c3g14B_



not modelled 99.3 15
PDB header:oxidoreductase
Chain: B: PDB Molecule:nitroreductase family protein;
PDBTitle: crystal structure of nitroreductase family protein (yp_877874.1) from2 clostridium novyi nt at 1.75 a resolution
42c3gbhC_



not modelled 99.2 10
PDB header:oxidoreductase
Chain: C: PDB Molecule:nad(p)h-flavin oxidoreductase;
PDBTitle: crystal structure of a putative nad(p)h:fmn oxidoreductase (se1966)2 from staphylococcus epidermidis atcc 12228 at 2.00 a resolution
43c4dn2A_



not modelled 99.2 21
PDB header:oxidoreductase
Chain: A: PDB Molecule:nitroreductase;
PDBTitle: crystal structure of putative nitroreductase from geobacter2 metallireducens gs-15
44c3e10B_



not modelled 99.2 19
PDB header:oxidoreductase
Chain: B: PDB Molecule:putative nadh oxidase;
PDBTitle: crystal structure of putative nadh oxidase (np_348178.1) from2 clostridium acetobutylicum at 1.40 a resolution
45c3koqC_



not modelled 99.2 14
PDB header:oxidoreductase
Chain: C: PDB Molecule:nitroreductase family protein;
PDBTitle: crystal structure of a nitroreductase family protein (cd3355) from2 clostridium difficile 630 at 1.58 a resolution
46c2r01A_



not modelled 99.2 20
PDB header:oxidoreductase
Chain: A: PDB Molecule:nitroreductase family protein;
PDBTitle: crystal structure of a putative fmn-dependent nitroreductase (ct0345)2 from chlorobium tepidum tls at 1.15 a resolution
47d1ywqa1



not modelled 99.1 12
Fold:FMN-dependent nitroreductase-like
Superfamily:FMN-dependent nitroreductase-like
Family:NADH oxidase/flavin reductase
48c5j6cA_



not modelled 99.1 18
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative reductase;
PDBTitle: fmn-dependent nitroreductase (cdr20291_0767) from clostridium2 difficile r20291
49c2h0uA_



not modelled 99.1 18
PDB header:oxidoreductase
Chain: A: PDB Molecule:nadph-flavin oxidoreductase;
PDBTitle: crystal structure of nad(p)h-flavin oxidoreductase from helicobacter2 pylori
50d2frea1



not modelled 99.1 21
Fold:FMN-dependent nitroreductase-like
Superfamily:FMN-dependent nitroreductase-like
Family:NADH oxidase/flavin reductase
51c2wqfA_



not modelled 99.0 19
PDB header:oxidoreductase
Chain: A: PDB Molecule:copper induced nitroreductase d;
PDBTitle: crystal structure of the nitroreductase cind from2 lactococcus lactis in complex with fmn
52d2ifaa1



not modelled 99.0 14
Fold:FMN-dependent nitroreductase-like
Superfamily:FMN-dependent nitroreductase-like
Family:NADH oxidase/flavin reductase
53c4urpB_



not modelled 99.0 16
PDB header:oxidoreductase
Chain: B: PDB Molecule:fatty acid repression mutant protein 2;
PDBTitle: the crystal structure of nitroreductase from saccharomyces2 cerevisiae
54d1vkwa_



not modelled 98.8 28
Fold:FMN-dependent nitroreductase-like
Superfamily:FMN-dependent nitroreductase-like
Family:Putative nitroreductase TM1586
55c3hj9A_



not modelled 98.8 31
PDB header:oxidoreductase
Chain: A: PDB Molecule:oxidoreductase;
PDBTitle: crystal structure of a putative nitroreductase (reut_a1228) from2 ralstonia eutropha jmp134 at 2.00 a resolution
56c3hoiA_



not modelled 98.7 24
PDB header:oxidoreductase
Chain: A: PDB Molecule:fmn-dependent nitroreductase bf3017;
PDBTitle: crystal structure of fmn-dependent nitroreductase bf3017 from2 bacteroides fragilis nctc 9343 (yp_212631.1) from bacteroides3 fragilis nctc 9343 at 1.55 a resolution
57c5j62B_



not modelled 98.5 15
PDB header:oxidoreductase
Chain: B: PDB Molecule:putative reductase;
PDBTitle: fmn-dependent nitroreductase (cdr20291_0684) from clostridium2 difficile r20291
58c3eo7A_



not modelled 98.5 19
PDB header:flavoprotein
Chain: A: PDB Molecule:putative nitroreductase;
PDBTitle: crystal structure of a putative nitroreductase (ava_2154) from2 anabaena variabilis atcc 29413 at 1.80 a resolution
59c5lq4B_



not modelled 98.3 18
PDB header:oxidoreductase
Chain: B: PDB Molecule:cyagox;
PDBTitle: the structure of thcox, the first oxidase protein from the cyanobactin2 pathways
60c6gosC_



not modelled 94.5 16
PDB header:antibiotic/inhibitor
Chain: C: PDB Molecule:microcin b17-processing protein mcbc;
PDBTitle: e. coli microcin synthetase mcbbcd complex with pro-mccb17 bound
61c3vteA_



not modelled 61.0 8
PDB header:oxidoreductase
Chain: A: PDB Molecule:tetrahydrocannabinolic acid synthase;
PDBTitle: crystal structure of tetrahydrocannabinolic acid synthase from2 cannabis sativa
62d1f3ub_



not modelled 33.0 15
Fold:triple barrel
Superfamily:Rap30/74 interaction domains
Family:Rap30/74 interaction domains
63c2h1oH_



not modelled 20.3 29
PDB header:gene regulation/dna complex
Chain: H: PDB Molecule:trafficking protein a;
PDBTitle: structure of fitab bound to ir36 dna fragment
64c3fwaA_



not modelled 19.8 5
PDB header:flavoprotein
Chain: A: PDB Molecule:reticuline oxidase;
PDBTitle: structure of berberine bridge enzyme, c166a variant in complex with2 (s)-reticuline
65d2bsqe1



not modelled 19.1 29
Fold:Ribbon-helix-helix
Superfamily:Ribbon-helix-helix
Family:Trafficking protein A-like
66c5sxpF_



not modelled 12.7 23
PDB header:signaling protein/ligase
Chain: F: PDB Molecule:e3 ubiquitin-protein ligase itchy homolog;
PDBTitle: structural basis for the interaction between itch prr and beta-pix
67c4kdiC_



not modelled 12.2 25
PDB header:signaling protein/hydrolase
Chain: C: PDB Molecule:ubiquitin thioesterase otu1;
PDBTitle: crystal structure of p97/vcp n in complex with otu1 ubxl
68c3d2hA_



not modelled 11.8 5
PDB header:oxidoreductase
Chain: A: PDB Molecule:berberine bridge-forming enzyme;
PDBTitle: structure of berberine bridge enzyme from eschscholzia californica,2 monoclinic crystal form
69d2fcia1



not modelled 11.1 20
Fold:SH2-like
Superfamily:SH2 domain
Family:SH2 domain
70d2qmsa1



not modelled 11.0 0
Fold:SH2-like
Superfamily:SH2 domain
Family:SH2 domain
71c5sxpG_



not modelled 10.9 23
PDB header:signaling protein/ligase
Chain: G: PDB Molecule:e3 ubiquitin-protein ligase itchy homolog;
PDBTitle: structural basis for the interaction between itch prr and beta-pix
72d1ecfa2



not modelled 10.8 9
Fold:Ntn hydrolase-like
Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Family:Class II glutamine amidotransferases
73d1nrva_



not modelled 8.7 0
Fold:SH2-like
Superfamily:SH2 domain
Family:SH2 domain
74c6hq9A_



not modelled 8.6 75
PDB header:hydrolase
Chain: A: PDB Molecule:dna excision repair protein ercc-6-like 2;
PDBTitle: crystal structure of the tudor domain of human ercc6-l2
75c2aapA_



not modelled 7.5 17
PDB header:toxin
Chain: A: PDB Molecule:jingzhaotoxin-vii;
PDBTitle: solution structure of jingzhaotoxin-vii
76c2l2rA_



not modelled 7.3 0
PDB header:antimicrobial protein
Chain: A: PDB Molecule:antimicrobial peptide ecamp1;
PDBTitle: helical hairpin structure of a novel antimicrobial peptide ecamp1 from2 seeds of barnyard grass (echinochloa crus-galli)
77c2jy0A_



not modelled 6.8 23
PDB header:membrane protein, viral protein
Chain: A: PDB Molecule:protease ns2-3;
PDBTitle: solution nmr structure of hcv ns2 protein, membrane segment2 (1-27)
78c2hzsH_



not modelled 6.4 6
PDB header:transcription
Chain: H: PDB Molecule:rna polymerase ii mediator complex subunit 18;
PDBTitle: structure of the mediator head submodule med8c/18/20
79c6gcsg_



not modelled 6.3 11
PDB header:oxidoreductase
Chain: G: PDB Molecule:30-kda protein (nugm);
PDBTitle: cryo-em structure of respiratory complex i from yarrowia lipolytica
80d2ijqa1



not modelled 6.0 23
Fold:Hyaluronidase domain-like
Superfamily:TTHA0068-like
Family:TTHA0068-like
81c4ml8C_



not modelled 5.8 11
PDB header:oxidoreductase
Chain: C: PDB Molecule:cytokinin oxidase 2;
PDBTitle: structure of maize cytokinin oxidase/dehydrogenase 2 (zmcko2)
82d1r5ta_



not modelled 5.7 15
Fold:Cytidine deaminase-like
Superfamily:Cytidine deaminase-like
Family:Cytidine deaminase
83c3tsjA_



not modelled 5.6 7
PDB header:allergen, oxidoreductase
Chain: A: PDB Molecule:pollen allergen phl p 4;
PDBTitle: crystal structure of phl p 4, a grass pollen allergen with glucose2 dehydrogenase activity
84c2jyaA_



not modelled 5.3 23
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein atu1810;
PDBTitle: nmr solution structure of protein atu1810 from agrobacterium2 tumefaciens. northeast structural genomics consortium target atr23,3 ontario centre for structural proteomics target atc1776
85c5lnkc_



not modelled 5.2 23
PDB header:oxidoreductase
Chain: C: PDB Molecule:
PDBTitle: entire ovine respiratory complex i
86d1kjqa2



not modelled 5.2 14
Fold:PreATP-grasp domain
Superfamily:PreATP-grasp domain
Family:BC N-terminal domain-like

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