Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2342_(-)_2620282_2620539
DateMon Aug 5 13:25:49 BST 2019
Unique Job ID3b9697f8c99f115e
SequenceLIGYVAVLGL ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:16.667 Y:26.801 Z:13.936
Model (left) based on template c4cz5D_
Top template information
PDB header:cell cycle
Chain: D: PDB Molecule:cellular tumor antigen p53;
PDBTitle: truncated tetramerization domain of zebrafish p53 (crystal form i)
Confidence and coverage
Confidence: 28.3% Coverage: 18%
15 residues ( 18% of your sequence) have been modelled with 28.3% confidence by the single highest scoring template.
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3D viewing
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Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c4cz5D_



28.3 40
PDB header:cell cycle
Chain: D: PDB Molecule:cellular tumor antigen p53;
PDBTitle: truncated tetramerization domain of zebrafish p53 (crystal form i)
2c1q90M_



26.7 33
PDB header:photosynthesis
Chain: M: PDB Molecule:cytochrome b6f complex subunit petm;
PDBTitle: structure of the cytochrome b6f (plastohydroquinone : plastocyanin2 oxidoreductase) from chlamydomonas reinhardtii
3d1q90m_



26.7 33
Fold:Single transmembrane helix
Superfamily:PetM subunit of the cytochrome b6f complex
Family:PetM subunit of the cytochrome b6f complex
4c4a9zD_



22.6 33
PDB header:transcription
Chain: D: PDB Molecule:tumor protein 63;
PDBTitle: crystal structure of human p63 tetramerization domain
5c3zy1A_



22.6 33
PDB header:transcription
Chain: A: PDB Molecule:tumor protein 63;
PDBTitle: crystal structure of the human p63 tetramerization domain
6d1zcba1



21.7 19
Fold:Transducin (alpha subunit), insertion domain
Superfamily:Transducin (alpha subunit), insertion domain
Family:Transducin (alpha subunit), insertion domain
7d2bcjq1



20.8 10
Fold:Transducin (alpha subunit), insertion domain
Superfamily:Transducin (alpha subunit), insertion domain
Family:Transducin (alpha subunit), insertion domain
8c4a9zC_



20.0 33
PDB header:transcription
Chain: C: PDB Molecule:tumor protein 63;
PDBTitle: crystal structure of human p63 tetramerization domain
9d1hs5a_



19.7 47
Fold:p53 tetramerization domain
Superfamily:p53 tetramerization domain
Family:p53 tetramerization domain
10c4d1mE_



19.7 40
PDB header:transcription
Chain: E: PDB Molecule:cellular tumor antigen p53;
PDBTitle: tetramerization domain of zebrafish p53 (crystal form ii)
11c5hobB_



18.9 33
PDB header:transcription
Chain: B: PDB Molecule:tumor protein p73;
PDBTitle: p73 homo-tetramerization domain mutant i
12d3saka_



18.8 40
Fold:p53 tetramerization domain
Superfamily:p53 tetramerization domain
Family:p53 tetramerization domain
13c5h75B_



18.6 21
PDB header:lyase
Chain: B: PDB Molecule:mersacidin decarboxylase,immunoglobulin g-binding protein
PDBTitle: crystal structure of the mrsd-protein a fusion protein
14d1zcaa1



18.1 14
Fold:Transducin (alpha subunit), insertion domain
Superfamily:Transducin (alpha subunit), insertion domain
Family:Transducin (alpha subunit), insertion domain
15c5w8sA_



17.9 14
PDB header:transferase
Chain: A: PDB Molecule:lipid-a-disaccharide synthase;
PDBTitle: lipid a disaccharide synthase (lpxb)-7 solubilizing mutations
16d1azta1



17.1 19
Fold:Transducin (alpha subunit), insertion domain
Superfamily:Transducin (alpha subunit), insertion domain
Family:Transducin (alpha subunit), insertion domain
17d1a1ua_



15.4 47
Fold:p53 tetramerization domain
Superfamily:p53 tetramerization domain
Family:p53 tetramerization domain
18d1tada1



14.6 5
Fold:Transducin (alpha subunit), insertion domain
Superfamily:Transducin (alpha subunit), insertion domain
Family:Transducin (alpha subunit), insertion domain
19d1cipa1



14.5 11
Fold:Transducin (alpha subunit), insertion domain
Superfamily:Transducin (alpha subunit), insertion domain
Family:Transducin (alpha subunit), insertion domain
20c3j9eD_



14.4 5
PDB header:viral protein
Chain: D: PDB Molecule:vp5;
PDBTitle: atomic structure of a non-enveloped virus reveals ph sensors for a2 coordinated process of cell entry
21c3tsaA_



not modelled 12.6 17
PDB header:transferase
Chain: A: PDB Molecule:ndp-rhamnosyltransferase;
PDBTitle: spinosyn rhamnosyltransferase spng
22d1g5qa_



not modelled 12.3 20
Fold:Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
Superfamily:Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
Family:Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
23c2wttH_



not modelled 11.5 16
PDB header:transcription
Chain: H: PDB Molecule:tumor protein p73;
PDBTitle: structure of the human p73 tetramerization domain (crystal form ii)
24c2wttN_



not modelled 11.3 27
PDB header:transcription
Chain: N: PDB Molecule:tumor protein p73;
PDBTitle: structure of the human p73 tetramerization domain (crystal form ii)
25c2j10B_



not modelled 10.9 40
PDB header:transcription
Chain: B: PDB Molecule:cellular tumor antigen p53;
PDBTitle: p53 tetramerization domain mutant t329f q331k
26c2j10D_



not modelled 10.9 40
PDB header:transcription
Chain: D: PDB Molecule:cellular tumor antigen p53;
PDBTitle: p53 tetramerization domain mutant t329f q331k
27c2j10A_



not modelled 10.9 40
PDB header:transcription
Chain: A: PDB Molecule:cellular tumor antigen p53;
PDBTitle: p53 tetramerization domain mutant t329f q331k
28d1aiea_



not modelled 10.7 40
Fold:p53 tetramerization domain
Superfamily:p53 tetramerization domain
Family:p53 tetramerization domain
29c6gcsJ_



not modelled 10.7 35
PDB header:oxidoreductase
Chain: J: PDB Molecule:nujm subunit;
PDBTitle: cryo-em structure of respiratory complex i from yarrowia lipolytica
30c6jlsA_



not modelled 10.6 17
PDB header:biosynthetic protein
Chain: A: PDB Molecule:putative flavoprotein decarboxylase;
PDBTitle: crystal structure of fmn-dependent cysteine decarboxylases tvaf from2 thioviridamide biosynthesis
31c2qjhH_



not modelled 10.4 3
PDB header:lyase
Chain: H: PDB Molecule:putative aldolase mj0400;
PDBTitle: m. jannaschii adh synthase covalently bound to2 dihydroxyacetone phosphate
32c2rjbD_



not modelled 10.4 10
PDB header:structural genomics, unknown function
Chain: D: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of uncharacterized protein ydcj (sf1787) from2 shigella flexneri which includes domain duf1338. northeast structural3 genomics consortium target sfr276
33c4rieB_



not modelled 10.0 20
PDB header:transferase
Chain: B: PDB Molecule:glycosyl transferase homolog;
PDBTitle: landomycin glycosyltransferase langt2
34c6cfwI_



not modelled 10.0 35
PDB header:membrane protein
Chain: I: PDB Molecule:mbh subunit;
PDBTitle: cryoem structure of a respiratory membrane-bound hydrogenase
35c4leiB_



not modelled 9.8 20
PDB header:transferase
Chain: B: PDB Molecule:ndp-forosamyltransferase;
PDBTitle: spinosyn forosaminyltransferase spnp
36d1n2aa1



not modelled 9.5 14
Fold:GST C-terminal domain-like
Superfamily:GST C-terminal domain-like
Family:Glutathione S-transferase (GST), C-terminal domain
37c2j11D_



not modelled 9.4 40
PDB header:transcription
Chain: D: PDB Molecule:cellular tumor antigen p53;
PDBTitle: p53 tetramerization domain mutant y327s t329g q331g
38c2kegA_



not modelled 9.4 36
PDB header:antimicrobial protein
Chain: A: PDB Molecule:plnk;
PDBTitle: nmr structure of plantaricin k in dpc-micelles
39c2wttL_



not modelled 9.1 27
PDB header:transcription
Chain: L: PDB Molecule:tumor protein p73;
PDBTitle: structure of the human p73 tetramerization domain (crystal form ii)
40c1flcB_



not modelled 8.2 38
PDB header:hydrolase
Chain: B: PDB Molecule:haemagglutinin-esterase-fusion glycoprotein;
PDBTitle: x-ray structure of the haemagglutinin-esterase-fusion glycoprotein of2 influenza c virus
41d1p3y1_



not modelled 8.2 19
Fold:Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
Superfamily:Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
Family:Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
42d1f2ea1



not modelled 7.9 10
Fold:GST C-terminal domain-like
Superfamily:GST C-terminal domain-like
Family:Glutathione S-transferase (GST), C-terminal domain
43c4fzrA_



not modelled 7.9 9
PDB header:transferase
Chain: A: PDB Molecule:ssfs6;
PDBTitle: crystal structure of ssfs6, streptomyces sp. sf25752 glycosyltransferase
44c2ls4A_



not modelled 7.6 46
PDB header:metal transport
Chain: A: PDB Molecule:high affinity copper uptake protein 1;
PDBTitle: 1h chemical shift assignments for the third transmembrane domain from2 the human copper transport 1
45c2j6yB_



not modelled 7.5 26
PDB header:hydrolase
Chain: B: PDB Molecule:phosphoserine phosphatase rsbu;
PDBTitle: structural and functional characterisation of partner switching2 regulating the environmental stress response in bacillus subtilis
46c6g2jY_



not modelled 7.3 24
PDB header:oxidoreductase
Chain: Y: PDB Molecule:mcg5603;
PDBTitle: mouse mitochondrial complex i in the active state
47c4zbbD_



not modelled 7.3 9
PDB header:transferase
Chain: D: PDB Molecule:pcure2p8;
PDBTitle: crystal structure of the glutathione transferase ure2p8 from2 phanerochaete chrysosporium complexed with glutathionyl-s-3 dinitrobenzene.
48c5ldwY_



not modelled 7.0 24
PDB header:oxidoreductase
Chain: Y: PDB Molecule:nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit
PDBTitle: structure of mammalian respiratory complex i, class1
49d2tpta3



not modelled 6.9 32
Fold:alpha/beta-Hammerhead
Superfamily:Pyrimidine nucleoside phosphorylase C-terminal domain
Family:Pyrimidine nucleoside phosphorylase C-terminal domain
50c3gndC_



not modelled 6.8 11
PDB header:lyase
Chain: C: PDB Molecule:aldolase lsrf;
PDBTitle: crystal structure of e. coli lsrf in complex with ribulose-5-phosphate
51c4hfqB_



not modelled 6.8 20
PDB header:hydrolase
Chain: B: PDB Molecule:mutt/nudix family protein;
PDBTitle: crystal structure of udp-x diphosphatase
52c3wadA_



not modelled 6.6 14
PDB header:transferase
Chain: A: PDB Molecule:glycosyltransferase;
PDBTitle: crystal structure of glycosyltransferase vinc involved in the2 biosynthesis of vicenistatin
53c4onxB_



not modelled 5.9 8
PDB header:transferase
Chain: B: PDB Molecule:sensor histidine kinase;
PDBTitle: 2.8 angstrom crystal structure of sensor domain of histidine kinase2 from clostridium perfringens.
54c2imuA_



not modelled 5.6 29
PDB header:viral protein
Chain: A: PDB Molecule:structural polyprotein (pp) p1;
PDBTitle: nmr structure of pep46 from the infectious bursal disease2 virus (ibdv) in dodecylphosphocholin (dpc).
55c4isdA_



not modelled 5.6 7
PDB header:transferase
Chain: A: PDB Molecule:glutathione s-transferase;
PDBTitle: crystal structure of glutathione transferase homolog from burkholderia2 gl bgr1, target efi-501803, with bound glutathione
56c1p58E_



not modelled 5.5 24
PDB header:virus
Chain: E: PDB Molecule:envelope protein m;
PDBTitle: complex organization of dengue virus membrane proteins as revealed by2 9.5 angstrom cryo-em reconstruction

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