Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2361c_(-)_2642588_2643478
DateMon Aug 5 13:25:51 BST 2019
Unique Job IDa1c1b1019f096ef2
SequenceVARDARKRTS ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:64.805 Y:54.051 Z:44.130
Model (left) based on template c2vg2C_
Top template information
PDB header:transferase
Chain: C: PDB Molecule:undecaprenyl pyrophosphate synthetase;
PDBTitle: rv2361 with ipp
Confidence and coverage
Confidence:100.0% Coverage: 96%
283 residues ( 96% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
3D viewing
Interactive 3D view in JSmol
For other options to view your downloaded structure offline see the FAQ

Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c2vg2C_
100.0 100
PDB header:transferase
Chain: C: PDB Molecule:undecaprenyl pyrophosphate synthetase;
PDBTitle: rv2361 with ipp
2c4h8eA_
100.0 40
PDB header:transferase/transferase inhibitor
Chain: A: PDB Molecule:undecaprenyl pyrophosphate synthase;
PDBTitle: structure of s. aureus undecaprenyl diphosphate synthase in complex2 with fpp and sulfate
3c4q9mA_
100.0 42
PDB header:transferase/transferase inhibitor
Chain: A: PDB Molecule:isoprenyl transferase;
PDBTitle: crystal structure of upps in complex with fpp and an allosteric2 inhibitor
4c5hc7A_
100.0 39
PDB header:transferase/transferase inhibitor
Chain: A: PDB Molecule:prenyltransference for protein;
PDBTitle: crystal structure of lavandulyl diphosphate synthase from lavandula x2 intermedia in complex with s-thiolo-isopentenyldiphosphate
5c2vfwB_
100.0 35
PDB header:transferase
Chain: B: PDB Molecule:short-chain z-isoprenyl diphosphate synthetase;
PDBTitle: rv1086 native
6d1ueha_
100.0 40
Fold:Undecaprenyl diphosphate synthase
Superfamily:Undecaprenyl diphosphate synthase
Family:Undecaprenyl diphosphate synthase
7c5gukA_
100.0 27
PDB header:biosynthetic protein
Chain: A: PDB Molecule:cyclolavandulyl diphosphate synthase;
PDBTitle: crystal structure of apo form of cyclolavandulyl diphosphate synthase2 (clds) from streptomyces sp. cl190
8c5hxpA_
100.0 37
PDB header:transferase
Chain: A: PDB Molecule:(2z,6z)-farnesyl diphosphate synthase, chloroplastic;
PDBTitle: crystal structure of z,z-farnesyl diphosphate synthase (d71m, e75a and2 h103y mutants) complexed with ipp
9c1jp3A_
100.0 39
PDB header:transferase
Chain: A: PDB Molecule:undecaprenyl pyrophosphate synthase;
PDBTitle: structure of e.coli undecaprenyl pyrophosphate synthase
10c5xk9F_
100.0 22
PDB header:transferase
Chain: F: PDB Molecule:undecaprenyl diphosphate synthase;
PDBTitle: crystal structure of isosesquilavandulyl diphosphate synthase from2 streptomyces sp. strain cnh-189 in complex with gspp and dmapp
11d1f75a_
100.0 38
Fold:Undecaprenyl diphosphate synthase
Superfamily:Undecaprenyl diphosphate synthase
Family:Undecaprenyl diphosphate synthase
12c6acsA_
100.0 36
PDB header:transferase
Chain: A: PDB Molecule:ditrans,polycis-undecaprenyl-diphosphate synthase ((2e,6e)-
PDBTitle: poly-cis-prenyltransferase
13c2d2rA_
100.0 35
PDB header:transferase
Chain: A: PDB Molecule:undecaprenyl pyrophosphate synthase;
PDBTitle: crystal structure of helicobacter pylori undecaprenyl pyrophosphate2 synthase
14c3ugsB_
100.0 36
PDB header:transferase
Chain: B: PDB Molecule:undecaprenyl pyrophosphate synthase;
PDBTitle: crystal structure of a probable undecaprenyl diphosphate synthase2 (upps) from campylobacter jejuni
15c6jcnB_
100.0 18
PDB header:transferase
Chain: B: PDB Molecule:dehydrodolichyl diphosphate synthase complex subunit nus1;
PDBTitle: yeast dehydrodolichyl diphosphate synthase complex subunit nus1
16c4cmxB_
98.7 15
PDB header:nuclear protein
Chain: B: PDB Molecule:rv3378c;
PDBTitle: crystal structure of rv3378c
17c4k3zA_
94.9 10
PDB header:oxidoreductase
Chain: A: PDB Molecule:d-erythrulose 4-phosphate dehydrogenase;
PDBTitle: crystal structure of d-erythrulose 4-phosphate dehydrogenase from2 brucella melitensis, solved by iodide sad
18c3cnyA_
94.7 6
PDB header:biosynthetic protein
Chain: A: PDB Molecule:inositol catabolism protein iole;
PDBTitle: crystal structure of a putative inositol catabolism protein iole2 (iole, lp_3607) from lactobacillus plantarum wcfs1 at 1.85 a3 resolution
19c3qxbB_
94.4 13
PDB header:isomerase
Chain: B: PDB Molecule:putative xylose isomerase;
PDBTitle: crystal structure of a putative xylose isomerase (yp_426450.1) from2 rhodospirillum rubrum atcc 11170 at 1.90 a resolution
20c3bdkB_
94.3 14
PDB header:lyase
Chain: B: PDB Molecule:d-mannonate dehydratase;
PDBTitle: crystal structure of streptococcus suis mannonate2 dehydratase complexed with substrate analogue
21c3dx5A_
not modelled 93.8 10
PDB header:lyase
Chain: A: PDB Molecule:uncharacterized protein asbf;
PDBTitle: crystal structure of the probable 3-dhs dehydratase asbf involved in2 the petrobactin synthesis from bacillus anthracis
22d1tz9a_
not modelled 93.4 13
Fold:TIM beta/alpha-barrel
Superfamily:Xylose isomerase-like
Family:UxuA-like
23c2hk1D_
not modelled 93.2 13
PDB header:isomerase
Chain: D: PDB Molecule:d-psicose 3-epimerase;
PDBTitle: crystal structure of d-psicose 3-epimerase (dpease) in the presence of2 d-fructose
24c2zdsB_
not modelled 93.1 11
PDB header:dna binding protein
Chain: B: PDB Molecule:putative dna-binding protein;
PDBTitle: crystal structure of sco6571 from streptomyces coelicolor a3(2)
25c2ou4C_
not modelled 92.9 15
PDB header:isomerase
Chain: C: PDB Molecule:d-tagatose 3-epimerase;
PDBTitle: crystal structure of d-tagatose 3-epimerase from2 pseudomonas cichorii
26c3cqkB_
not modelled 92.3 12
PDB header:isomerase
Chain: B: PDB Molecule:l-ribulose-5-phosphate 3-epimerase ulae;
PDBTitle: crystal structure of l-xylulose-5-phosphate 3-epimerase ulae (form b)2 complex with zn2+ and sulfate
27c3b4uB_
not modelled 91.1 11
PDB header:lyase
Chain: B: PDB Molecule:dihydrodipicolinate synthase;
PDBTitle: crystal structure of dihydrodipicolinate synthase from agrobacterium2 tumefaciens str. c58
28c3vniC_
not modelled 90.9 13
PDB header:isomerase
Chain: C: PDB Molecule:xylose isomerase domain protein tim barrel;
PDBTitle: crystal structures of d-psicose 3-epimerase from clostridium2 cellulolyticum h10 and its complex with ketohexose sugars
29c5zfsA_
not modelled 89.9 16
PDB header:isomerase
Chain: A: PDB Molecule:d-allulose-3-epimerase;
PDBTitle: crystal structure of arthrobacter globiformis m30 sugar epimerase2 which can produce d-allulose from d-fructose
30c3vylB_
not modelled 89.6 13
PDB header:isomerase
Chain: B: PDB Molecule:l-ribulose 3-epimerase;
PDBTitle: structure of l-ribulose 3-epimerase
31d1i60a_
not modelled 88.9 18
Fold:TIM beta/alpha-barrel
Superfamily:Xylose isomerase-like
Family:IolI-like
32c5tnvA_
not modelled 88.2 10
PDB header:isomerase
Chain: A: PDB Molecule:ap endonuclease, family protein 2;
PDBTitle: crystal structure of a xylose isomerase-like tim barrel protein from2 mycobacterium smegmatis in complex with magnesium
33c2rfgB_
not modelled 86.7 12
PDB header:lyase
Chain: B: PDB Molecule:dihydrodipicolinate synthase;
PDBTitle: crystal structure of dihydrodipicolinate synthase from hahella2 chejuensis at 1.5a resolution
34c3kwsB_
not modelled 86.4 10
PDB header:isomerase
Chain: B: PDB Molecule:putative sugar isomerase;
PDBTitle: crystal structure of putative sugar isomerase (yp_001305149.1) from2 parabacteroides distasonis atcc 8503 at 1.68 a resolution
35c3s5oA_
not modelled 85.9 10
PDB header:lyase
Chain: A: PDB Molecule:4-hydroxy-2-oxoglutarate aldolase, mitochondrial;
PDBTitle: crystal structure of human 4-hydroxy-2-oxoglutarate aldolase bound to2 pyruvate
36c3ngfA_
not modelled 85.5 10
PDB header:isomerase
Chain: A: PDB Molecule:ap endonuclease, family 2;
PDBTitle: crystal structure of ap endonuclease, family 2 from brucella2 melitensis
37c3cprB_
not modelled 80.7 16
PDB header:lyase
Chain: B: PDB Molecule:dihydrodipicolinate synthetase;
PDBTitle: the crystal structure of corynebacterium glutamicum2 dihydrodipicolinate synthase to 2.2 a resolution
38c2qtzA_
not modelled 80.1 11
PDB header:oxidoreductase
Chain: A: PDB Molecule:methionine synthase reductase;
PDBTitle: crystal structure of the nadp+-bound fad-containing fnr-like module of2 human methionine synthase reductase
39c2zvrA_
not modelled 79.9 11
PDB header:isomerase
Chain: A: PDB Molecule:uncharacterized protein tm_0416;
PDBTitle: crystal structure of a d-tagatose 3-epimerase-related protein from2 thermotoga maritima
40c6j7aB_
not modelled 79.7 18
PDB header:oxidoreductase
Chain: B: PDB Molecule:heme oxygenase 1,nadph--cytochrome p450 reductase;
PDBTitle: fusion protein of heme oxygenase-1 and nadph cytochrome p450 reductase2 (17aa)
41c3tc3B_
not modelled 79.4 15
PDB header:hydrolase
Chain: B: PDB Molecule:uv damage endonuclease;
PDBTitle: crystal structure of sacuvde
42c3qfeB_
not modelled 79.3 13
PDB header:lyase
Chain: B: PDB Molecule:putative dihydrodipicolinate synthase family protein;
PDBTitle: crystal structures of a putative dihydrodipicolinate synthase family2 protein from coccidioides immitis
43c3eb2A_
not modelled 79.2 17
PDB header:lyase
Chain: A: PDB Molecule:putative dihydrodipicolinate synthetase;
PDBTitle: crystal structure of dihydrodipicolinate synthase from2 rhodopseudomonas palustris at 2.0a resolution
44c2x7vA_
not modelled 79.0 10
PDB header:hydrolase
Chain: A: PDB Molecule:probable endonuclease 4;
PDBTitle: crystal structure of thermotoga maritima endonuclease iv in2 the presence of zinc
45c2nuxB_
not modelled 78.3 19
PDB header:lyase
Chain: B: PDB Molecule:2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho gluconate
PDBTitle: 2-keto-3-deoxygluconate aldolase from sulfolobus acidocaldarius,2 native structure in p6522 at 2.5 a resolution
46c3fluD_
not modelled 78.2 18
PDB header:lyase
Chain: D: PDB Molecule:dihydrodipicolinate synthase;
PDBTitle: crystal structure of dihydrodipicolinate synthase from the pathogen2 neisseria meningitidis
47c6daqA_
not modelled 77.7 14
PDB header:lyase
Chain: A: PDB Molecule:phdj;
PDBTitle: phdj bound to substrate intermediate
48c1j9zB_
not modelled 77.0 13
PDB header:oxidoreductase
Chain: B: PDB Molecule:nadph-cytochrome p450 reductase;
PDBTitle: cypor-w677g
49c2v9dB_
not modelled 76.8 12
PDB header:lyase
Chain: B: PDB Molecule:yage;
PDBTitle: crystal structure of yage, a prophage protein belonging to2 the dihydrodipicolinic acid synthase family from e. coli3 k12
50c5iq5A_
not modelled 76.8 12
PDB header:viral protein
Chain: A: PDB Molecule:macro domain;
PDBTitle: nmr solution structure of mayaro virus macro domain
51d1hl2a_
not modelled 76.7 17
Fold:TIM beta/alpha-barrel
Superfamily:Aldolase
Family:Class I aldolase
52d1bxba_
not modelled 74.2 11
Fold:TIM beta/alpha-barrel
Superfamily:Xylose isomerase-like
Family:Xylose isomerase
53c3noeA_
not modelled 73.5 15
PDB header:lyase
Chain: A: PDB Molecule:dihydrodipicolinate synthase;
PDBTitle: crystal structure of dihydrodipicolinate synthase from pseudomonas2 aeruginosa
54c3ktcB_
not modelled 72.3 11
PDB header:isomerase
Chain: B: PDB Molecule:xylose isomerase;
PDBTitle: crystal structure of putative sugar isomerase (yp_050048.1) from2 erwinia carotovora atroseptica scri1043 at 1.54 a resolution
55c3pueA_
not modelled 72.3 16
PDB header:lyase
Chain: A: PDB Molecule:dihydrodipicolinate synthase;
PDBTitle: crystal structure of the complex of dhydrodipicolinate synthase from2 acinetobacter baumannii with lysine at 2.6a resolution
56c3si9B_
not modelled 72.1 17
PDB header:lyase
Chain: B: PDB Molecule:dihydrodipicolinate synthase;
PDBTitle: crystal structure of dihydrodipicolinate synthase from bartonella2 henselae
57c3h5dD_
not modelled 72.1 15
PDB header:lyase
Chain: D: PDB Molecule:dihydrodipicolinate synthase;
PDBTitle: dihydrodipicolinate synthase from drug-resistant streptococcus2 pneumoniae
58c3daqB_
not modelled 71.9 11
PDB header:lyase
Chain: B: PDB Molecule:dihydrodipicolinate synthase;
PDBTitle: crystal structure of dihydrodipicolinate synthase from methicillin-2 resistant staphylococcus aureus
59c4ovxA_
not modelled 71.7 16
PDB header:isomerase
Chain: A: PDB Molecule:xylose isomerase domain protein tim barrel;
PDBTitle: crystal structure of xylose isomerase domain protein from planctomyces2 limnophilus dsm 3776
60c5afdA_
not modelled 71.3 19
PDB header:lyase
Chain: A: PDB Molecule:n-acetylneuraminate lyase;
PDBTitle: native structure of n-acetylneuramininate lyase (sialic acid aldolase)2 from aliivibrio salmonicida
61d2ebfx2
not modelled 71.2 17
Fold:EreA/ChaN-like
Superfamily:EreA/ChaN-like
Family:PMT domain-like
62c2ksnA_
not modelled 69.7 23
PDB header:signaling protein
Chain: A: PDB Molecule:ubiquitin domain-containing protein 2;
PDBTitle: solution structure of the n-terminal domain of dc-ubp/ubtd2
63c5n6yD_
not modelled 69.5 14
PDB header:oxidoreductase
Chain: D: PDB Molecule:nitrogenase vanadium-iron protein alpha chain;
PDBTitle: azotobacter vinelandii vanadium nitrogenase
64c3g0sA_
not modelled 69.4 11
PDB header:lyase
Chain: A: PDB Molecule:dihydrodipicolinate synthase;
PDBTitle: dihydrodipicolinate synthase from salmonella typhimurium lt2
65c3gqeA_
not modelled 69.2 10
PDB header:viral protein
Chain: A: PDB Molecule:non-structural protein 3;
PDBTitle: crystal structure of macro domain of venezuelan equine encephalitis2 virus
66c5gxuA_
not modelled 68.9 18
PDB header:oxidoreductase
Chain: A: PDB Molecule:nadph--cytochrome p450 reductase 2;
PDBTitle: cystal structure of arabidopsis atr2
67c4uxdC_
not modelled 67.2 11
PDB header:lyase
Chain: C: PDB Molecule:2-dehydro-3-deoxy-d-gluconate/2-dehydro-3-deoxy-
PDBTitle: 2-keto 3-deoxygluconate aldolase from picrophilus torridus
68d1xxxa1
not modelled 67.1 12
Fold:TIM beta/alpha-barrel
Superfamily:Aldolase
Family:Class I aldolase
69c2vc6A_
not modelled 66.5 17
PDB header:lyase
Chain: A: PDB Molecule:dihydrodipicolinate synthase;
PDBTitle: structure of mosa from s. meliloti with pyruvate bound
70c3n2xB_
not modelled 64.5 11
PDB header:lyase
Chain: B: PDB Molecule:uncharacterized protein yage;
PDBTitle: crystal structure of yage, a prophage protein belonging to the2 dihydrodipicolinic acid synthase family from e. coli k12 in complex3 with pyruvate
71c3fkkA_
not modelled 64.4 13
PDB header:lyase
Chain: A: PDB Molecule:l-2-keto-3-deoxyarabonate dehydratase;
PDBTitle: structure of l-2-keto-3-deoxyarabonate dehydratase
72c3bi8A_
not modelled 64.3 11
PDB header:lyase
Chain: A: PDB Molecule:dihydrodipicolinate synthase;
PDBTitle: structure of dihydrodipicolinate synthase from clostridium2 botulinum
73d1k77a_
not modelled 64.3 19
Fold:TIM beta/alpha-barrel
Superfamily:Xylose isomerase-like
Family:Hypothetical protein YgbM (EC1530)
74c5ak1A_
not modelled 63.2 15
PDB header:hydrolase
Chain: A: PDB Molecule:carbohydrate binding family 6;
PDBTitle: the penta-modular cellulosomal arabinoxylanase ctxyl5a2 structure as revealed by x-ray crystallography
75c3ju2A_
not modelled 62.8 15
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein smc04130;
PDBTitle: crystal structure of protein smc04130 from sinorhizobium meliloti 1021
76c2yxgD_
not modelled 61.8 15
PDB header:lyase
Chain: D: PDB Molecule:dihydrodipicolinate synthase;
PDBTitle: crystal structure of dihyrodipicolinate synthase (dapa)
77c2qw5B_
not modelled 61.5 7
PDB header:isomerase
Chain: B: PDB Molecule:xylose isomerase-like tim barrel;
PDBTitle: crystal structure of a putative sugar phosphate isomerase/epimerase2 (ava4194) from anabaena variabilis atcc 29413 at 1.78 a resolution
78c3lciA_
not modelled 60.7 17
PDB header:lyase
Chain: A: PDB Molecule:n-acetylneuraminate lyase;
PDBTitle: the d-sialic acid aldolase mutant v251w
79c3lmzA_
not modelled 60.6 9
PDB header:isomerase
Chain: A: PDB Molecule:putative sugar isomerase;
PDBTitle: crystal structure of putative sugar isomerase. (yp_001305105.1) from2 parabacteroides distasonis atcc 8503 at 1.44 a resolution
80c2bpoA_
not modelled 60.0 15
PDB header:reductase
Chain: A: PDB Molecule:nadph-cytochrom p450 reductase;
PDBTitle: crystal structure of the yeast cpr triple mutant: d74g, y75f, k78a.
81d1xima_
not modelled 59.1 18
Fold:TIM beta/alpha-barrel
Superfamily:Xylose isomerase-like
Family:Xylose isomerase
82c2ehhE_
not modelled 58.2 13
PDB header:lyase
Chain: E: PDB Molecule:dihydrodipicolinate synthase;
PDBTitle: crystal structure of dihydrodipicolinate synthase from2 aquifex aeolicus
83c5ud6B_
not modelled 57.2 17
PDB header:lyase
Chain: B: PDB Molecule:dihydrodipicolinate synthase;
PDBTitle: crystal structure of dhdps from cyanidioschyzon merolae with lysine2 bound
84c3lerA_
not modelled 56.7 19
PDB header:lyase
Chain: A: PDB Molecule:dihydrodipicolinate synthase;
PDBTitle: crystal structure of dihydrodipicolinate synthase from campylobacter2 jejuni subsp. jejuni nctc 11168
85c3q71A_
not modelled 56.6 14
PDB header:transferase
Chain: A: PDB Molecule:poly [adp-ribose] polymerase 14;
PDBTitle: human parp14 (artd8) - macro domain 2 in complex with adenosine-5-2 diphosphoribose
86c5ktlA_
not modelled 56.5 15
PDB header:lyase
Chain: A: PDB Molecule:4-hydroxy-tetrahydrodipicolinate synthase;
PDBTitle: dihydrodipicolinate synthase from the industrial and evolutionarily2 important cyanobacteria anabaena variabilis.
87c3d0cB_
not modelled 56.3 13
PDB header:lyase
Chain: B: PDB Molecule:dihydrodipicolinate synthase;
PDBTitle: crystal structure of dihydrodipicolinate synthase from oceanobacillus2 iheyensis at 1.9 a resolution
88c5hmqE_
not modelled 56.1 12
PDB header:lyase
Chain: E: PDB Molecule:4-hydroxyphenylpyruvate dioxygenase;
PDBTitle: xylose isomerase-like tim barrel/4-hydroxyphenylpyruvate dioxygenase2 fusion protein
89c3wqoB_
not modelled 54.8 19
PDB header:unknown function
Chain: B: PDB Molecule:uncharacterized protein mj1311;
PDBTitle: crystal structure of d-tagatose 3-epimerase-like protein
90d1zr5a1
not modelled 54.5 9
Fold:Macro domain-like
Superfamily:Macro domain-like
Family:Macro domain
91c3e96B_
not modelled 53.7 9
PDB header:lyase
Chain: B: PDB Molecule:dihydrodipicolinate synthase;
PDBTitle: crystal structure of dihydrodipicolinate synthase from bacillus2 clausii
92d1xkya1
not modelled 53.5 17
Fold:TIM beta/alpha-barrel
Superfamily:Aldolase
Family:Class I aldolase
93c6mqhA_
not modelled 52.9 17
PDB header:lyase
Chain: A: PDB Molecule:4-hydroxy-tetrahydrodipicolinate synthase;
PDBTitle: crystal structure of 4-hydroxy-tetrahydrodipicolinate synthase (htpa2 synthase) from burkholderia mallei
94c3aamA_
not modelled 52.3 16
PDB header:hydrolase
Chain: A: PDB Molecule:endonuclease iv;
PDBTitle: crystal structure of endonuclease iv from thermus thermophilus hb8
95c1ddiA_
not modelled 52.0 16
PDB header:oxidoreductase
Chain: A: PDB Molecule:sulfite reductase [nadph] flavoprotein alpha-component;
PDBTitle: crystal structure of sir-fp60
96c2r8wB_
not modelled 51.4 13
PDB header:lyase
Chain: B: PDB Molecule:agr_c_1641p;
PDBTitle: the crystal structure of dihydrodipicolinate synthase (atu0899) from2 agrobacterium tumefaciens str. c58
97d1o5ka_
not modelled 51.1 13
Fold:TIM beta/alpha-barrel
Superfamily:Aldolase
Family:Class I aldolase
98d1bxca_
not modelled 51.1 13
Fold:TIM beta/alpha-barrel
Superfamily:Xylose isomerase-like
Family:Xylose isomerase
99c4i7vD_
not modelled 50.6 16
PDB header:biosynthetic protein
Chain: D: PDB Molecule:dihydrodipicolinate synthase;
PDBTitle: agrobacterium tumefaciens dhdps with pyruvate
100c5kivA_
not modelled 50.3 16
PDB header:hydrolase
Chain: A: PDB Molecule:protein-adp-ribose hydrolase;
PDBTitle: crystal structure of saumacro (sav0325)
101c5mrjA_
not modelled 50.2 15
PDB header:hydrolase
Chain: A: PDB Molecule:beta-xylanase;
PDBTitle: crystal structure of endo-1,4-beta-xylanase-like protein from2 acremonium chrysogenum
102c5c54D_
not modelled 49.9 13
PDB header:lyase
Chain: D: PDB Molecule:dihydrodipicolinate synthase/n-acetylneuraminate lyase;
PDBTitle: crystal structure of a novel n-acetylneuraminic acid lyase from2 corynebacterium glutamicum
103d2a6na1
not modelled 49.8 12
Fold:TIM beta/alpha-barrel
Superfamily:Aldolase
Family:Class I aldolase
104c4ur7B_
not modelled 47.9 7
PDB header:lyase
Chain: B: PDB Molecule:keto-deoxy-d-galactarate dehydratase;
PDBTitle: crystal structure of keto-deoxy-d-galactarate dehydratase2 complexed with pyruvate
105c3p6lA_
not modelled 47.3 6
PDB header:isomerase
Chain: A: PDB Molecule:sugar phosphate isomerase/epimerase;
PDBTitle: crystal structure of a sugar phosphate isomerase/epimerase (bdi_1903)2 from parabacteroides distasonis atcc 8503 at 1.85 a resolution
106d1bg4a_
not modelled 47.3 9
Fold:TIM beta/alpha-barrel
Superfamily:(Trans)glycosidases
Family:beta-glycanases
107c3zddA_
not modelled 47.0 17
PDB header:hydrolase/dna
Chain: A: PDB Molecule:protein xni;
PDBTitle: structure of e. coli exoix in complex with the palindromic 5ov62 oligonucleotide and potassium
108c5hqcA_
not modelled 46.5 13
PDB header:hydrolase
Chain: A: PDB Molecule:glycoside hydrolase family 97 enzyme;
PDBTitle: a glycoside hydrolase family 97 enzyme r171k variant from2 pseudoalteromonas sp. strain k8
109c3dz1A_
not modelled 46.3 14
PDB header:lyase
Chain: A: PDB Molecule:dihydrodipicolinate synthase;
PDBTitle: crystal structure of dihydrodipicolinate synthase from2 rhodopseudomonas palustris at 1.87a resolution
110d1qh8a_
not modelled 45.9 11
Fold:Chelatase-like
Superfamily:"Helical backbone" metal receptor
Family:Nitrogenase iron-molybdenum protein
111c6daoB_
not modelled 45.8 15
PDB header:lyase
Chain: B: PDB Molecule:trans-o-hydroxybenzylidenepyruvate hydratase-aldolase;
PDBTitle: nahe wt selenomethionine
112c2zq0B_
not modelled 45.5 12
PDB header:hydrolase
Chain: B: PDB Molecule:alpha-glucosidase (alpha-glucosidase susb);
PDBTitle: crystal structure of susb complexed with acarbose
113c4xv0A_
not modelled 45.0 11
PDB header:hydrolase
Chain: A: PDB Molecule:beta-xylanase;
PDBTitle: crystal structure of an endo-beta-1,4-xylanase (glycoside hydrolase2 family 10/gh10) enzyme from trichoderma reesei
114c5ui3C_
not modelled 44.9 16
PDB header:lyase
Chain: C: PDB Molecule:dihydrodipicolinate synthase;
PDBTitle: crystal structure of dhdps from chlamydomonas reinhardtii
115d1yvka1
not modelled 43.7 17
Fold:Acyl-CoA N-acyltransferases (Nat)
Superfamily:Acyl-CoA N-acyltransferases (Nat)
Family:N-acetyl transferase, NAT
116c4ah7C_
not modelled 43.1 19
PDB header:lyase
Chain: C: PDB Molecule:n-acetylneuraminate lyase;
PDBTitle: structure of wild type stapylococcus aureus n-acetylneuraminic acid2 lyase in complex with pyruvate
117c2lr8A_
not modelled 42.7 18
PDB header:apoptosis
Chain: A: PDB Molecule:casp8-associated protein 2;
PDBTitle: solution nmr structure of casp8-associated protein 2 from homo2 sapiens, northeast structural genomics consortium (nesg) target3 hr8150a
118c4nq1B_
not modelled 42.7 11
PDB header:lyase
Chain: B: PDB Molecule:4-hydroxy-tetrahydrodipicolinate synthase;
PDBTitle: legionella pneumophila dihydrodipicolinate synthase with first2 substrate pyruvate bound in the active site
119c3bzjA_
not modelled 42.3 12
PDB header:hydrolase
Chain: A: PDB Molecule:uv endonuclease;
PDBTitle: uvde k229l
120c4ablA_
not modelled 41.9 15
PDB header:transferase
Chain: A: PDB Molecule:poly [adp-ribose] polymerase 14;
PDBTitle: human parp14 (artd8, bal2) - macro domain 3

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite