Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2386A_(RVBD2386A)_2680468_2680677
DateMon Aug 5 13:25:54 BST 2019
Unique Job ID69765ede0a82aed6
SequenceMFVIRLADGE ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:28.543 Y:22.223 Z:55.444
Model (left) based on template d1jz8a4
Top template information
Fold:Supersandwich
Superfamily:Galactose mutarotase-like
Family:beta-Galactosidase, domain 5
Confidence and coverage
Confidence: 52.0% Coverage: 70%
48 residues ( 70% of your sequence) have been modelled with 52.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d1jz8a4



52.0 15
Fold:Supersandwich
Superfamily:Galactose mutarotase-like
Family:beta-Galactosidase, domain 5
2d2omwb1



20.4 14
Fold:Immunoglobulin-like beta-sandwich
Superfamily:Cadherin-like
Family:Cadherin
3c3ff8B_



17.7 27
PDB header:cell adhesion/immune system
Chain: B: PDB Molecule:epithelial cadherin;
PDBTitle: structure of nk cell receptor klrg1 bound to e-cadherin
4d1l3wa1



15.8 28
Fold:Immunoglobulin-like beta-sandwich
Superfamily:Cadherin-like
Family:Cadherin
5c1nciB_



15.3 29
PDB header:cell adhesion protein
Chain: B: PDB Molecule:n-cadherin;
PDBTitle: structural basis of cell-cell adhesion by cadherins
6d2omzb1



14.0 28
Fold:Immunoglobulin-like beta-sandwich
Superfamily:Cadherin-like
Family:Cadherin
7c4zmtF_



14.0 20
PDB header:cell adhesion
Chain: F: PDB Molecule:cadherin-3;
PDBTitle: crystal structure of human p-cadherin (ss-x-dimer-long)
8c3mv14_



13.4 12
PDB header:hydrolase
Chain: 4: PDB Molecule:beta-galactosidase;
PDBTitle: e.coli (lacz) beta-galactosidase (r599a) in complex with guanidinium
9c3ff7B_



13.3 29
PDB header:cell adhesion/immune system
Chain: B: PDB Molecule:epithelial cadherin;
PDBTitle: structure of nk cell receptor klrg1 bound to e-cadherin
10c1nciA_



13.2 18
PDB header:cell adhesion protein
Chain: A: PDB Molecule:n-cadherin;
PDBTitle: structural basis of cell-cell adhesion by cadherins
11d1ncia_



13.2 18
Fold:Immunoglobulin-like beta-sandwich
Superfamily:Cadherin-like
Family:Cadherin
12c1nchB_



12.4 16
PDB header:cell adhesion protein
Chain: B: PDB Molecule:n-cadherin;
PDBTitle: structural basis of cell-cell adhesion by cadherins
13c1jz6C_



11.5 14
PDB header:hydrolase
Chain: C: PDB Molecule:beta-galactosidase;
PDBTitle: e. coli (lacz) beta-galactosidase in complex with galacto-2 tetrazole
14c2rqxA_



11.4 50
PDB header:signaling protein
Chain: A: PDB Molecule:polymyxin b resistance protein;
PDBTitle: solution nmr structure of pmrd from klebsiella pneumoniae
15c1ncgA_



11.3 17
PDB header:cell adhesion protein
Chain: A: PDB Molecule:n-cadherin;
PDBTitle: structural basis of cell-cell adhesion by cadherins
16c1zxkB_



11.1 25
PDB header:cell adhesion
Chain: B: PDB Molecule:cadherin-8;
PDBTitle: crystal structure of cadherin8 ec1 domain
17c2p6yA_



7.5 25
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein vca0587;
PDBTitle: x-ray structure of the protein q9km02_vibch from vibrio cholerae at2 the resolution 1.63 a. northeast structural genomics consortium3 target vcr80.
18c1nchA_



7.3 29
PDB header:cell adhesion protein
Chain: A: PDB Molecule:n-cadherin;
PDBTitle: structural basis of cell-cell adhesion by cadherins
19c2jsoA_



7.1 40
PDB header:signaling protein
Chain: A: PDB Molecule:polymyxin resistance protein pmrd;
PDBTitle: antimicrobial resistance protein
20d1igqa_



7.0 21
Fold:SH3-like barrel
Superfamily:C-terminal domain of transcriptional repressors
Family:Transcriptional repressor protein KorB
21c1zvnA_



not modelled 6.9 24
PDB header:cell adhesion
Chain: A: PDB Molecule:cadherin 1;
PDBTitle: crystal structure of chick mn-cadherin ec1
22d2f9zc1



not modelled 6.6 29
Fold:CNF1/YfiH-like putative cysteine hydrolases
Superfamily:CNF1/YfiH-like putative cysteine hydrolases
Family:CheD-like
23c1dgjA_



not modelled 6.5 19
PDB header:oxidoreductase
Chain: A: PDB Molecule:aldehyde oxidoreductase;
PDBTitle: crystal structure of the aldehyde oxidoreductase from2 desulfovibrio desulfuricans atcc 27774
24c4lq8B_



not modelled 6.3 24
PDB header:cell adhesion
Chain: B: PDB Molecule:sca-family protein;
PDBTitle: rickettsia rickettsii cell surface antigen 4 (sca4) head domain2 (residues 21-360)
25c3hwuA_



not modelled 6.2 13
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative dna-binding protein;
PDBTitle: crystal structure of putative dna-binding protein (yp_299413.1) from2 ralstonia eutropha jmp134 at 1.30 a resolution
26c1zxkA_



not modelled 6.2 24
PDB header:cell adhesion
Chain: A: PDB Molecule:cadherin-8;
PDBTitle: crystal structure of cadherin8 ec1 domain
27d1igub_



not modelled 6.1 21
Fold:SH3-like barrel
Superfamily:C-terminal domain of transcriptional repressors
Family:Transcriptional repressor protein KorB
28d1a0ia1



not modelled 6.1 29
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:DNA ligase/mRNA capping enzyme postcatalytic domain
29c5xknE_



not modelled 5.8 45
PDB header:transferase/signaling protein
Chain: E: PDB Molecule:epidermal patterning factor-like protein 4;
PDBTitle: crystal structure of plant receptor erl2 in complexe with epfl4
30c5xknF_



not modelled 5.8 45
PDB header:transferase/signaling protein
Chain: F: PDB Molecule:epidermal patterning factor-like protein 4;
PDBTitle: crystal structure of plant receptor erl2 in complexe with epfl4
31c5kwbA_



not modelled 5.6 29
PDB header:viral protein
Chain: A: PDB Molecule:spike glycoprotein;
PDBTitle: crystal structure of the receptor binding domain of the spike2 glycoprotein of human betacoronavirus hku1 (hku1 1a-ctd, 1.93 angstrom, molecular replacement)
32d2qlva1



not modelled 5.5 20
Fold:TBP-like
Superfamily:KA1-like
Family:Ssp2 C-terminal domain-like
33c5ghaF_



not modelled 5.4 41
PDB header:transferase/transport protein
Chain: F: PDB Molecule:sulfur carrier ttub;
PDBTitle: sulfur transferase ttua in complex with sulfur carrier ttub
34c3htrB_



not modelled 5.4 19
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized prc-barrel domain protein;
PDBTitle: crystal structure of prc-barrel domain protein from2 rhodopseudomonas palustris
35c3hlzA_



not modelled 5.3 50
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein bt_1490;
PDBTitle: crystal structure of bt_1490 (np_810393.1) from bacteroides2 thetaiotaomicron vpi-5482 at 1.50 a resolution
36c4eogA_



not modelled 5.3 33
PDB header:dna binding protein
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of csx1 of pyrococcus furiosus

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