Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2395A_(RVBD2395A)_2692234_2692449
DateMon Aug 5 13:25:55 BST 2019
Unique Job ID8dd17f294bd488e4
SequenceLTMTASVAKV ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:24.979 Y:27.559 Z:32.349
Model (left) based on template c6gcsP_
Top template information
PDB header:oxidoreductase
Chain: P: PDB Molecule:nb4m subunit;
PDBTitle: cryo-em structure of respiratory complex i from yarrowia lipolytica
Confidence and coverage
Confidence: 50.8% Coverage: 44%
31 residues ( 44% of your sequence) have been modelled with 50.8% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c6gcsP_



50.8 19
PDB header:oxidoreductase
Chain: P: PDB Molecule:nb4m subunit;
PDBTitle: cryo-em structure of respiratory complex i from yarrowia lipolytica
2d2vkva2



31.1 24
Fold:Tetracyclin repressor-like, C-terminal domain
Superfamily:Tetracyclin repressor-like, C-terminal domain
Family:Tetracyclin repressor-like, C-terminal domain
3c5lc5W_



24.2 31
PDB header:oxidoreductase
Chain: W: PDB Molecule:nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit
PDBTitle: structure of mammalian respiratory complex i, class2
4c2mt3A_



15.4 40
PDB header:transcription
Chain: A: PDB Molecule:rna polymerase sigma-54 factor;
PDBTitle: structure of -24 dna binding domain of sigma 54 from e.coli
5c5w7dA_



12.4 29
PDB header:hydrolase
Chain: A: PDB Molecule:acyloxyacyl hydrolase;
PDBTitle: murine acyloxyacyl hydrolase (aoah), s262a mutant
6d1gnya_



9.1 69
Fold:Galactose-binding domain-like
Superfamily:Galactose-binding domain-like
Family:CBM15
7c3w1sC_



8.6 18
PDB header:ligase
Chain: C: PDB Molecule:ubiquitin-like protein atg12;
PDBTitle: crystal structure of saccharomyces cerevisiae atg12-atg5 conjugate2 bound to the n-terminal domain of atg16
8c6f0gD_



6.9 67
PDB header:chaperone
Chain: D: PDB Molecule:ip3;
PDBTitle: crystal structure asf1-ip3
9c6f0gC_



6.9 67
PDB header:chaperone
Chain: C: PDB Molecule:ip3;
PDBTitle: crystal structure asf1-ip3
10c6adqP_



6.8 67
PDB header:electron transport
Chain: P: PDB Molecule:prokaryotic respiratory supercomplex associate factor 1
PDBTitle: respiratory complex ciii2civ2sod2 from mycobacterium smegmatis
11c6r1eC_



5.8 22
PDB header:flavoprotein
Chain: C: PDB Molecule:dodecin;
PDBTitle: structure of dodecin from streptomyces coelicolor
12c2rilA_



5.4 21
PDB header:oxidoreductase
Chain: A: PDB Molecule:antibiotic biosynthesis monooxygenase;
PDBTitle: crystal structure of a putative monooxygenase (yp_001095275.1) from2 shewanella loihica pv-4 at 1.26 a resolution
13c4hedA_



5.4 40
PDB header:signaling protein
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: zebrafish chemokine cxl1
14c5l3xB_



5.4 50
PDB header:transcription
Chain: B: PDB Molecule:negative elongation factor c/d;
PDBTitle: crystal structure of negative elongation factor subcomplex nelf-ac
15c2m4eA_



5.3 22
PDB header:unknown function
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: solution nmr structure of vv2_0175 from vibrio vulnificus, nesg target2 vnr1 and csgid target idp91333

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