1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		V	G	P	M	N	G	F	L	S	W	W	D	G	V	E	L	W	L	S	G	L	P	F	A	L	Q	A	L	A	V	M	P	V	V	L	A	L	A	Y	F	T	A	A	L	L	D	A	L	L	G	R	V	I	Q	L	I	R	R	A	R
Secondary structure
SS confidence
Disorder		?	?																																																									?	?
Disorder confidence
		.	.	.	.	.	.	.
Sequence		R	P	D	Q	A	P	R
Secondary structure
SS confidence
Disorder		?	?	?	?	?	?	?
Disorder confidence

Confidence Key High(9)                     Low (0)

? Disordered ( 16%) Alpha helix ( 85%) Beta strand ( 0%) TM helix ( 55%) (View membrane topology prediction)

Rank Aligned region

PDB 2mbh chain B Region: 2 - 15 Aligned: 14 Modelled: 14 Confidence: 19.9% Identity: 36% PDB header:transcription Chain: B: PDB Molecule:krueppel-like factor 1; PDBTitle: nmr structure of eklf(22-40)/ubiquitin complex Phyre2 PDB 5wbi chain A Region: 13 - 56 Aligned: 44 Modelled: 44 Confidence: 19.0% Identity: 27% PDB header:protein binding Chain: A: PDB Molecule:regulatory-associated protein of tor 1; PDBTitle: crystal structure of the arabidopsis thaliana raptor Phyre2 PDB 1loi chain A Region: 6 - 14 Aligned: 9 Modelled: 9 Confidence: 14.4% Identity: 33% PDB header:hydrolase Chain: A: PDB Molecule:cyclic 3',5'-amp specific phosphodiesterase rd1; PDBTitle: n-terminal splice region of rat c-amp phosphodiesterase,2 nmr, 7 structures Phyre2 PDB 5gpd chain A Region: 2 - 16 Aligned: 15 Modelled: 15 Confidence: 12.2% Identity: 27% PDB header:dna binding protein Chain: A: PDB Molecule:sterol regulatory element-binding protein 1; PDBTitle: crystal structure of the binding domain of srebp from fission yeast Phyre2 PDB 2lgz chain A Region: 7 - 12 Aligned: 6 Modelled: 6 Confidence: 11.0% Identity: 50% PDB header:transferase, membrane protein Chain: A: PDB Molecule:dolichyl-diphosphooligosaccharide--protein PDBTitle: solution structure of stt3p Phyre2 PDB 2mom chain C Region: 34 - 60 Aligned: 27 Modelled: 27 Confidence: 10.3% Identity: 15% PDB header:membrane protein Chain: C: PDB Molecule:lysosome-associated membrane glycoprotein 2; PDBTitle: structural insights of tm domain of lamp-2a in dpc micelles Phyre2 PDB 2mom chain B Region: 34 - 60 Aligned: 27 Modelled: 27 Confidence: 9.7% Identity: 15% PDB header:membrane protein Chain: B: PDB Molecule:lysosome-associated membrane glycoprotein 2; PDBTitle: structural insights of tm domain of lamp-2a in dpc micelles Phyre2 PDB 5ldw chain F Region: 32 - 47 Aligned: 16 Modelled: 16 Confidence: 9.0% Identity: 19% PDB header:oxidoreductase Chain: F: PDB Molecule:nadh dehydrogenase [ubiquinone] flavoprotein 1, PDBTitle: structure of mammalian respiratory complex i, class1 Phyre2 PDB 5lc5 chain F Region: 32 - 47 Aligned: 16 Modelled: 16 Confidence: 9.0% Identity: 19% PDB header:oxidoreductase Chain: F: PDB Molecule:nadh dehydrogenase [ubiquinone] flavoprotein 1, PDBTitle: structure of mammalian respiratory complex i, class2 Phyre2 PDB 5ir6 chain B Region: 4 - 18 Aligned: 15 Modelled: 15 Confidence: 6.6% Identity: 13% PDB header:oxidoreductase Chain: B: PDB Molecule:bd-type quinol oxidase subunit ii; PDBTitle: the structure of bd oxidase from geobacillus thermodenitrificans Phyre2 PDB 3vu0 chain B Region: 6 - 12 Aligned: 7 Modelled: 7 Confidence: 6.3% Identity: 71% PDB header:transferase Chain: B: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of the c-terminal globular domain of2 oligosaccharyltransferase (afaglb-s2, af_0040, o30195_arcfu) from3 archaeoglobus fulgidus Phyre2 PDB 1iie chain A Region: 11 - 18 Aligned: 8 Modelled: 8 Confidence: 6.1% Identity: 38% Fold: Class II MHC-associated invariant chain ectoplasmic trimerization domain Superfamily: Class II MHC-associated invariant chain ectoplasmic trimerization domain Family: Class II MHC-associated invariant chain ectoplasmic trimerization domain Phyre2 1 c2mbhB_ 2 c5wbiA_ 3 c1loiA_ 4 c5gpdA_ 5 c2lgzA_ 6 c2momC_ 7 c2momB_ 8 c5ldwf_ 9 c5lc5f_ 10 c5ir6B_ 11 c3vu0B_ 12 d1iiea_