Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2404c_(lepA)_2701297_2703258
DateWed Aug 7 12:50:02 BST 2019
Unique Job ID9927f4977641f6e2
SequenceVRTPCSQHRR ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:78.349 Y:70.460 Z:117.828
Model (left) based on template c4qjty_
Top template information
PDB header:ribosome
Chain: Y: PDB Molecule:
PDBTitle: crystal structure of elongation factor 4 (ef4/lepa) bound to the2 thermus thermophilus 70s ribosome, 30s subunit of the 70s ribosome
Confidence and coverage
Confidence:100.0% Coverage: 91%
592 residues ( 91% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c4qjty_
100.0 55
PDB header:ribosome
Chain: Y: PDB Molecule:
PDBTitle: crystal structure of elongation factor 4 (ef4/lepa) bound to the2 thermus thermophilus 70s ribosome, 30s subunit of the 70s ribosome
2c3degC_
100.0 52
PDB header:ribosome
Chain: C: PDB Molecule:gtp-binding protein lepa;
PDBTitle: complex of elongating escherichia coli 70s ribosome and ef4(lepa)-2 gmppnp
3c3cb4D_
100.0 50
PDB header:translation
Chain: D: PDB Molecule:gtp-binding protein lepa;
PDBTitle: the crystal structure of lepa
4c2ywfA_
100.0 52
PDB header:translation
Chain: A: PDB Molecule:gtp-binding protein lepa;
PDBTitle: crystal structure of gmppnp-bound lepa from aquifex aeolicus
5c3j38z_
100.0 29
PDB header:ribosome
Chain: Z: PDB Molecule:40s ribosomal protein s25;
PDBTitle: structure of the d. melanogaster 40s ribosomal proteins
6c3jcrB_
100.0 25
PDB header:splicing
Chain: B: PDB Molecule:hsnu114;
PDBTitle: 3d structure determination of the human*u4/u6.u5* tri-snrnp complex
7c3b8hA_
100.0 26
PDB header:biosynthetic protein/transferase
Chain: A: PDB Molecule:elongation factor 2;
PDBTitle: structure of the eef2-exoa(e546a)-nad+ complex
8c5mqfB_
100.0 22
PDB header:splicing
Chain: B: PDB Molecule:116 kda u5 small nuclear ribonucleoprotein component;
PDBTitle: cryo-em structure of a human spliceosome activated for step 2 of2 splicing (c* complex)
9c3jb9B_
100.0 22
PDB header:rna binding protein/rna
Chain: B: PDB Molecule:pre-mrna-splicing factor cwf10;
PDBTitle: cryo-em structure of the yeast spliceosome at 3.6 angstrom resolution
10c4zciA_
100.0 29
PDB header:gtp-binding protein
Chain: A: PDB Molecule:gtp-binding protein typa/bipa;
PDBTitle: crystal structure of escherichia coli gtpase bipa/typa
11c5z58C_
100.0 22
PDB header:splicing
Chain: C: PDB Molecule:116 kda u5 small nuclear ribonucleoprotein component;
PDBTitle: cryo-em structure of a human activated spliceosome (early bact) at 4.92 angstrom.
12c2dy1A_
100.0 27
PDB header:signaling protein, translation
Chain: A: PDB Molecule:elongation factor g;
PDBTitle: crystal structure of ef-g-2 from thermus thermophilus
13c5ganC_
100.0 21
PDB header:transcription
Chain: C: PDB Molecule:pre-mrna-splicing factor snu114;
PDBTitle: the overall structure of the yeast spliceosomal u4/u6.u5 tri-snrnp at2 3.7 angstrom
14c5ancK_
100.0 31
PDB header:translation
Chain: K: PDB Molecule:elongation factor tu gtp-binding domain-containing protein
PDBTitle: mechanism of eif6 release from the nascent 60s ribosomal subunit
15c5lj3C_
100.0 20
PDB header:splicing
Chain: C: PDB Molecule:pre-mrna-splicing factor snu114;
PDBTitle: structure of the core of the yeast spliceosome immediately after2 branching
16c3j25A_
100.0 23
PDB header:translation
Chain: A: PDB Molecule:tetracycline resistance protein tetm;
PDBTitle: structural basis for tetm-mediated tetracycline resistance
17c2xexA_
100.0 30
PDB header:translation
Chain: A: PDB Molecule:elongation factor g;
PDBTitle: crystal structure of staphylococcus aureus elongation factor2 g
18c2bm0A_
100.0 32
PDB header:elongation factor
Chain: A: PDB Molecule:elongation factor g;
PDBTitle: ribosomal elongation factor g (ef-g) fusidic acid resistant mutant2 t84a
19c4fn5A_
100.0 29
PDB header:translation/antibiotic
Chain: A: PDB Molecule:elongation factor g 1;
PDBTitle: elongation factor g 1 (pseudomonas aeruginosa) in complex with argyrin2 b
20c5h7lB_
100.0 32
PDB header:translation/ribosomal protein
Chain: B: PDB Molecule:elongation factor 2;
PDBTitle: complex of elongation factor 2-50s ribosomal protein l12
21c1zn0B_
not modelled 100.0 32
PDB header:translation/biosynthetic protein/rna
Chain: B: PDB Molecule:elongation factor g;
PDBTitle: coordinates of rrf and ef-g fitted into cryo-em map of the2 50s subunit bound with both ef-g (gdpnp) and rrf
22c2rdo7_
not modelled 100.0 27
PDB header:ribosome
Chain: 7: PDB Molecule:elongation factor g;
PDBTitle: 50s subunit with ef-g(gdpnp) and rrf bound
23c6notB_
not modelled 100.0 28
PDB header:translation
Chain: B: PDB Molecule:elongation factor g;
PDBTitle: crystal structure of a full length elongation factor g (ef-g) from2 rickettsia prowazekii
24c3vr1B_
not modelled 100.0 29
PDB header:translation
Chain: B: PDB Molecule:peptide chain release factor 3;
PDBTitle: crystal structure analysis of the translation factor rf3
25c3tr5C_
not modelled 100.0 27
PDB header:translation
Chain: C: PDB Molecule:peptide chain release factor 3;
PDBTitle: structure of a peptide chain release factor 3 (prfc) from coxiella2 burnetii
26c2h5eB_
not modelled 100.0 26
PDB header:translation
Chain: B: PDB Molecule:peptide chain release factor rf-3;
PDBTitle: crystal structure of e.coli polypeptide release factor rf3
27c4zu9A_
not modelled 100.0 20
PDB header:translation
Chain: A: PDB Molecule:elongation factor selb;
PDBTitle: crystal structure of bacterial selenocysteine-specific elongation2 factor ef-sec
28c1wb1C_
not modelled 100.0 17
PDB header:protein synthesis
Chain: C: PDB Molecule:translation elongation factor selb;
PDBTitle: crystal structure of translation elongation factor selb2 from methanococcus maripaludis in complex with gdp
29c3izq1_
not modelled 100.0 23
PDB header:ribosomal protein,hydrolase
Chain: 1: PDB Molecule:elongation factor 1 alpha-like protein;
PDBTitle: structure of the dom34-hbs1-gdpnp complex bound to a translating2 ribosome
30c4byrP_
not modelled 100.0 23
PDB header:ribosome
Chain: P: PDB Molecule:eukaryotic translation initiation factor 5b;
PDBTitle: cryo-em reconstruction of the 80s-eif5b-met-itrnamet2 eukaryotic translation initiation complex
31c4b3xA_
not modelled 100.0 26
PDB header:translation
Chain: A: PDB Molecule:translation initiation factor if-2;
PDBTitle: bacterial translation initiation factor if2 (1-363), apo form
32c1mj1A_
not modelled 100.0 22
PDB header:ribosome
Chain: A: PDB Molecule:elongation factor tu;
PDBTitle: fitting the ternary complex of ef-tu/trna/gtp and ribosomal proteins2 into a 13 a cryo-em map of the coli 70s ribosome
33c1g7cA_
not modelled 100.0 26
PDB header:translation
Chain: A: PDB Molecule:elongation factor 1-alpha;
PDBTitle: yeast eef1a:eef1ba in complex with gdpnp
34c1zunB_
not modelled 100.0 21
PDB header:transferase
Chain: B: PDB Molecule:sulfate adenylate transferase, subunit
PDBTitle: crystal structure of a gtp-regulated atp sulfurylase2 heterodimer from pseudomonas syringae
35c3agjC_
not modelled 100.0 28
PDB header:translation/hydrolase
Chain: C: PDB Molecule:elongation factor 1-alpha;
PDBTitle: crystal structure of archaeal pelota and gtp-bound ef1 alpha complex
36c3p27A_
not modelled 100.0 18
PDB header:signaling protein
Chain: A: PDB Molecule:elongation factor 1 alpha-like protein;
PDBTitle: crystal structure of s. cerevisiae hbs1 protein (gdp-bound form), a2 translational gtpase involved in rna quality control pathways and3 interacting with dom34/pelota
37c4nclB_
not modelled 100.0 22
PDB header:translation
Chain: B: PDB Molecule:eukaryotic translation initiation factor 5b-like protein;
PDBTitle: crystal structure of eukaryotic translation initiation factor eif5b2 (517-970) from chaetomium thermophilum in complex with gdp
38c1d2eA_
not modelled 100.0 22
PDB header:rna binding protein
Chain: A: PDB Molecule:elongation factor tu (ef-tu);
PDBTitle: crystal structure of mitochondrial ef-tu in complex with gdp
39c3mmpC_
not modelled 100.0 24
PDB header:transferase
Chain: C: PDB Molecule:elongation factor tu 2, elongation factor ts;
PDBTitle: structure of the qb replicase, an rna-dependent rna polymerase2 consisting of viral and host proteins
40c5fg3A_
not modelled 100.0 24
PDB header:translation
Chain: A: PDB Molecule:probable translation initiation factor if-2;
PDBTitle: crystal structure of gdp-bound aif5b from aeropyrum pernix
41c3j4jA_
not modelled 100.0 26
PDB header:translation
Chain: A: PDB Molecule:translation initiation factor if-2;
PDBTitle: model of full-length t. thermophilus translation initiation factor 22 refined against its cryo-em density from a 30s initiation complex map
42c1skqB_
not modelled 100.0 26
PDB header:translation
Chain: B: PDB Molecule:elongation factor 1-alpha;
PDBTitle: the crystal structure of sulfolobus solfataricus elongation factor 1-2 alpha in complex with magnesium and gdp
43c1g7tA_
not modelled 100.0 23
PDB header:translation
Chain: A: PDB Molecule:translation initiation factor if2/eif5b;
PDBTitle: x-ray structure of translation initiation factor if2/eif5b2 complexed with gdpnp
44c4kjzD_
not modelled 100.0 25
PDB header:translation
Chain: D: PDB Molecule:translation initiation factor if-2;
PDBTitle: crystal structure of thermus thermophilus if2, apo and gdp-bound forms2 (2-474)
45c4zkeA_
not modelled 100.0 22
PDB header:gtp binding protein
Chain: A: PDB Molecule:superkiller protein 7;
PDBTitle: crystal structure of the s. cerevisiae ski7 gtpase-like domain, bound2 to gtp.
46c3izyP_
not modelled 100.0 22
PDB header:rna, ribosomal protein
Chain: P: PDB Molecule:translation initiation factor if-2, mitochondrial;
PDBTitle: mammalian mitochondrial translation initiation factor 2
47c2bvnB_
not modelled 100.0 24
PDB header:elongation factor
Chain: B: PDB Molecule:elongation factor tu;
PDBTitle: e. coli ef-tu:gdpnp in complex with the antibiotic enacyloxin iia
48c3wbkB_
not modelled 100.0 25
PDB header:biosynthetic protein
Chain: B: PDB Molecule:eukaryotic translation initiation factor 5b;
PDBTitle: crystal structure analysis of eukaryotic translation initiation factor2 5b and 1a complex
49c5izmA_
not modelled 100.0 21
PDB header:translation
Chain: A: PDB Molecule:selenocysteine-specific elongation factor;
PDBTitle: the crystal structure of human eefsec in complex with gdpnp
50c3agqA_
not modelled 100.0 24
PDB header:translation,transferase
Chain: A: PDB Molecule:elongation factor ts, elongation factor tu 1, linker, q
PDBTitle: structure of viral polymerase form ii
51c4upyB_
not modelled 100.0 21
PDB header:ribosome
Chain: B: PDB Molecule:eif5b;
PDBTitle: mammalian 80s hcv-ires initiation complex with eif5b pre-like state
52c3j2k7_
not modelled 100.0 24
PDB header:ribosome/translation
Chain: 7: PDB Molecule:eukaryotic polypeptide chain release factor 3;
PDB Fragment:unp residues 147-584; PDBTitle: cryo-em structure of the mammalian erf1-erf3-associated termination2 complex
53c4crnP_
not modelled 100.0 23
PDB header:translation
Chain: P: PDB Molecule:erf3 in ribosome bound erf1-erf3-gdpnp complex;
PDBTitle: cryo-em of a pretermination complex with erf1 and erf3
54c1zo1I_
not modelled 100.0 25
PDB header:translation/rna
Chain: I: PDB Molecule:translation initiation factor 2;
PDBTitle: if2, if1, and trna fitted to cryo-em data of e. coli 70s2 initiation complex
55c4byxV_
not modelled 100.0 24
PDB header:ribosome
Chain: V: PDB Molecule:eukaryotic translation initiation factor 5b, probable
PDBTitle: cryo-em reconstruction of the 80s-eif5b-met-itrnamet eukaryotic2 translation initiation complex
56c3wyaA_
not modelled 100.0 27
PDB header:translation
Chain: A: PDB Molecule:elongation factor 1-alpha;
PDBTitle: crystal structure of gdp-bound ef1alpha from pyrococcus horikoshii
57c5k0yS_
not modelled 100.0 19
PDB header:translation
Chain: S: PDB Molecule:eukaryotic initiation factor 2 gamma subunit (eif2-gamma);
PDBTitle: m48s late-stage initiation complex, purified from rabbit reticulocytes2 lysates, displaying eif2 ternary complex and eif3 i and g subunits3 relocated to the intersubunit face
58c2plfA_
not modelled 100.0 16
PDB header:translation
Chain: A: PDB Molecule:translation initiation factor 2 gamma subunit;
PDBTitle: the structure of aif2gamma subunit from the archaeon2 sulfolobus solfataricus in the nucleotide-free form.
59c3mcaA_
not modelled 100.0 21
PDB header:translation regulation/hydrolase
Chain: A: PDB Molecule:elongation factor 1 alpha-like protein;
PDBTitle: structure of the dom34-hbs1 complex and implications for its role in2 no-go decay
60c2elfA_
not modelled 100.0 17
PDB header:translation
Chain: A: PDB Molecule:protein translation elongation factor 1a;
PDBTitle: crystal structure of the selb-like elongation factor ef-pyl from2 methanosarcina mazei
61c1kk3A_
not modelled 100.0 24
PDB header:translation
Chain: A: PDB Molecule:eif2gamma;
PDBTitle: structure of the wild-type large gamma subunit of2 initiation factor eif2 from pyrococcus abyssi complexed3 with gdp-mg2+
62c4n3nA_
not modelled 100.0 23
PDB header:translation
Chain: A: PDB Molecule:eukaryotic translation initiation factor 5b-like protein,
PDBTitle: crystal structure of eukaryotic translation initiation factor eif5b2 (517-1116) from chaetomium thermophilum, apo form
63c3j81k_
not modelled 100.0 18
PDB header:ribosome
Chain: K: PDB Molecule:es10;
PDBTitle: cryoem structure of a partial yeast 48s preinitiation complex
64c1r5nA_
not modelled 100.0 26
PDB header:translation
Chain: A: PDB Molecule:eukaryotic peptide chain release factor gtp-
PDBTitle: crystal structure analysis of sup35 complexed with gdp
65c5izkB_
not modelled 100.0 21
PDB header:translation
Chain: B: PDB Molecule:selenocysteine-specific elongation factor;
PDBTitle: the crystal structure of human eefsec in complex with gdp
66c1s0uA_
not modelled 100.0 17
PDB header:translation
Chain: A: PDB Molecule:translation initiation factor 2 gamma subunit;
PDBTitle: eif2gamma apo
67c2hdnJ_
not modelled 100.0 21
PDB header:translation
Chain: J: PDB Molecule:elongation factor ef-tu;
PDBTitle: trypsin-modified elongation factor tu in complex with2 tetracycline at 2.8 angstrom resolution
68d1n0ua2
not modelled 100.0 31
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:G proteins
69d2dy1a2
not modelled 100.0 29
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:G proteins
70d2bv3a2
not modelled 100.0 43
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:G proteins
71c3e3xA_
not modelled 100.0 27
PDB header:hydrolase
Chain: A: PDB Molecule:bipa;
PDBTitle: the c-terminal part of bipa protein from vibrio parahaemolyticus rimd2 2210633
72d1f60a3
not modelled 100.0 27
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:G proteins
73d1zunb3
not modelled 99.9 26
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:G proteins
74d2c78a3
not modelled 99.9 27
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:G proteins
75c1mkyA_
not modelled 99.9 18
PDB header:ligand binding protein
Chain: A: PDB Molecule:probable gtp-binding protein enga;
PDBTitle: structural analysis of the domain interactions in der, a switch2 protein containing two gtpase domains
76c5dn8A_
not modelled 99.9 25
PDB header:gtp-binding protein
Chain: A: PDB Molecule:gtpase der;
PDBTitle: 1.76 angstrom crystal structure of gtp-binding protein der from2 coxiella burnetii in complex with gdp.
77d1d2ea3
not modelled 99.9 28
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:G proteins
78c3j8gX_
not modelled 99.9 21
PDB header:ribosome
Chain: X: PDB Molecule:gtpase der;
PDBTitle: electron cryo-microscopy structure of enga bound with the 50s2 ribosomal subunit
79c2hjgA_
not modelled 99.9 21
PDB header:hydrolase
Chain: A: PDB Molecule:gtp-binding protein enga;
PDBTitle: the crystal structure of the b. subtilis yphc gtpase in complex with2 gdp
80c2e87A_
not modelled 99.9 18
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein ph1320;
PDBTitle: crystal structure of hypothetical gtp-binding protein ph1320 from2 pyrococcus horikoshii ot3, in complex with gdp
81d1jnya3
not modelled 99.9 30
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:G proteins
82d1n0ua5
not modelled 99.9 23
Fold:Ferredoxin-like
Superfamily:EF-G C-terminal domain-like
Family:EF-G/eEF-2 domains III and V
83d1s0ua3
not modelled 99.9 18
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:G proteins
84d2dy1a5
not modelled 99.9 26
Fold:Ferredoxin-like
Superfamily:EF-G C-terminal domain-like
Family:EF-G/eEF-2 domains III and V
85d2bv3a1
not modelled 99.9 22
Fold:Reductase/isomerase/elongation factor common domain
Superfamily:Translation proteins
Family:Elongation factors
86c2qthA_
not modelled 99.8 19
PDB header:nucleotide binding protein
Chain: A: PDB Molecule:gtp-binding protein;
PDBTitle: crystal structure of a gtp-binding protein from the hyperthermophilic2 archaeon sulfolobus solfataricus in complex with gdp
87d1r5ba3
not modelled 99.8 25
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:G proteins
88d2bv3a5
not modelled 99.8 28
Fold:Ferredoxin-like
Superfamily:EF-G C-terminal domain-like
Family:EF-G/eEF-2 domains III and V
89c5ady6_
not modelled 99.8 18
PDB header:ribosome
Chain: 6: PDB Molecule:gtpase hflx;
PDBTitle: cryo-em structures of the 50s ribosome subunit bound with hflx
90c3qq5A_
not modelled 99.8 21
PDB header:oxidoreductase
Chain: A: PDB Molecule:small gtp-binding protein;
PDBTitle: crystal structure of the [fefe]-hydrogenase maturation protein hydf
91c1xzqA_
not modelled 99.8 23
PDB header:hydrolase
Chain: A: PDB Molecule:probable trna modification gtpase trme;
PDBTitle: structure of the gtp-binding protein trme from thermotoga2 maritima complexed with 5-formyl-thf
92c3ievA_
not modelled 99.8 21
PDB header:nucleotide binding protein/rna
Chain: A: PDB Molecule:gtp-binding protein era;
PDBTitle: crystal structure of era in complex with mggnp and the 3' end of 16s2 rrna
93d1efca3
not modelled 99.8 25
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:G proteins
94d2dy1a1
not modelled 99.8 16
Fold:Reductase/isomerase/elongation factor common domain
Superfamily:Translation proteins
Family:Elongation factors
95c1wf3A_
not modelled 99.8 21
PDB header:hydrolase
Chain: A: PDB Molecule:gtp-binding protein;
PDBTitle: crystal structure of gtp-binding protein tt1341 from thermus2 thermophilus hb8
96c1egaB_
not modelled 99.8 19
PDB header:hydrolase
Chain: B: PDB Molecule:protein (gtp-binding protein era);
PDBTitle: crystal structure of a widely conserved gtpase era
97d1kk1a3
not modelled 99.8 20
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:G proteins
98c3k53B_
not modelled 99.8 21
PDB header:metal transport
Chain: B: PDB Molecule:ferrous iron transport protein b;
PDBTitle: crystal structure of nfeob from p. furiosus
99d1wb1a4
not modelled 99.8 28
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:G proteins
100c1udxA_
not modelled 99.8 19
PDB header:protein binding
Chain: A: PDB Molecule:the gtp-binding protein obg;
PDBTitle: crystal structure of the conserved protein tt1381 from thermus2 thermophilus hb8
101c3j65o_
not modelled 99.8 15
PDB header:ribosome
Chain: O: PDB Molecule:60s ribosomal protein l15;
PDBTitle: arx1 pre-60s particle. this entry contains the r-proteins and2 biogenesis factors.
102c3a1vB_
not modelled 99.8 21
PDB header:transport protein
Chain: B: PDB Molecule:iron(ii) transport protein b;
PDBTitle: crystal structue of the cytosolic domain of t. maritima feob2 iron iransporter in apo form
103c4dheA_
not modelled 99.8 16
PDB header:cell cycle
Chain: A: PDB Molecule:probable gtp-binding protein engb;
PDBTitle: crystal structure of a probable gtp-binding protein engb from2 burkholderia thailandensis
104c3gehA_
not modelled 99.8 18
PDB header:hydrolase
Chain: A: PDB Molecule:trna modification gtpase mnme;
PDBTitle: crystal structure of mnme from nostoc in complex with gdp, folinic2 acid and zn
105c4csu9_
not modelled 99.8 19
PDB header:ribosome
Chain: 9: PDB Molecule:gtpase obge/cgta;
PDBTitle: cryo-em structures of the 50s ribosome subunit bound with obge
106d2qn6a3
not modelled 99.8 18
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:G proteins
107d2dy1a4
not modelled 99.8 30
Fold:Ferredoxin-like
Superfamily:EF-G C-terminal domain-like
Family:EF-G/eEF-2 domains III and V
108c5hcnA_
not modelled 99.7 20
PDB header:hydrolase
Chain: A: PDB Molecule:gpn-loop gtpase 1;
PDBTitle: gpn-loop gtpase npa3 in complex with gmppcp
109c2wsmB_
not modelled 99.7 18
PDB header:metal binding protein
Chain: B: PDB Molecule:hydrogenase expression/formation protein (hypb);
PDBTitle: crystal structure of hydrogenase maturation factor hypb from2 archaeoglobus fulgidus
110c1lnzA_
not modelled 99.7 19
PDB header:cell cycle
Chain: A: PDB Molecule:spo0b-associated gtp-binding protein;
PDBTitle: structure of the obg gtp-binding protein
111d1yrba1
not modelled 99.7 22
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Nitrogenase iron protein-like
112d1n0ua4
not modelled 99.7 26
Fold:Ferredoxin-like
Superfamily:EF-G C-terminal domain-like
Family:EF-G/eEF-2 domains III and V
113c3ibyA_
not modelled 99.7 15
PDB header:transport protein
Chain: A: PDB Molecule:ferrous iron transport protein b;
PDBTitle: structure of cytosolic domain of l. pneumophila feob
114d2bm0a4
not modelled 99.7 27
Fold:Ferredoxin-like
Superfamily:EF-G C-terminal domain-like
Family:EF-G/eEF-2 domains III and V
115d1g7sa4
not modelled 99.7 25
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:G proteins
116c6em5b_
not modelled 99.7 18
PDB header:ribosome
Chain: B: PDB Molecule:60s ribosomal protein l3;
PDBTitle: state d architectural model (nsa1-tap flag-ytm1) - visualizing the2 assembly pathway of nucleolar pre-60s ribosomes
117c5ymxB_
not modelled 99.7 19
PDB header:signaling protein, hydrolase
Chain: B: PDB Molecule:mutual gliding-motility protein mgla;
PDBTitle: myxococcus xanthus mgla in gdp bound conformation
118d1svia_
not modelled 99.7 16
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:G proteins
119c3md0A_
not modelled 99.7 22
PDB header:transport protein
Chain: A: PDB Molecule:arginine/ornithine transport system atpase;
PDBTitle: crystal structure of arginine/ornithine transport system atpase from2 mycobacterium tuberculosis bound to gdp (a ras-like gtpase3 superfamily protein)
120c6bbqA_
not modelled 99.7 17
PDB header:lipid binding protein
Chain: A: PDB Molecule:cytohesin-3,adp-ribosylation factor 6;
PDBTitle: model for extended volume of truncated monomeric cytohesin-3 (grp1;2 amino acids 63-399) e161a arf6 q67l fusion protein

Binding site prediction 

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If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite