Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2406c_(-)_2704019_2704447
DateWed Aug 7 12:50:02 BST 2019
Unique Job ID5db97e0879845b55
SequenceMRIADVLRNK ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:46.043 Y:39.382 Z:28.312
Model (left) based on template d2rc3a1
Top template information
Fold:CBS-domain pair
Superfamily:CBS-domain pair
Family:CBS-domain pair
Confidence and coverage
Confidence: 99.9% Coverage: 88%
125 residues ( 88% of your sequence) have been modelled with 99.9% confidence by the single highest scoring template.
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Sequence analysis 

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Domain analysis [Show] 

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#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d2rc3a1



99.9 41
Fold:CBS-domain pair
Superfamily:CBS-domain pair
Family:CBS-domain pair
2c4fryA_



99.9 37
PDB header:signaling protein
Chain: A: PDB Molecule:putative signal-transduction protein with cbs domains;
PDBTitle: the structure of a putative signal-transduction protein with cbs2 domains from burkholderia ambifaria mc40-6
3c4o9kB_



99.9 18
PDB header:isomerase
Chain: B: PDB Molecule:arabinose 5-phosphate isomerase;
PDBTitle: crystal structure of the cbs pair of a putative d-arabinose 5-2 phosphate isomerase from methylococcus capsulatus in complex with3 cmp-kdo
4c2qh1B_



99.9 19
PDB header:unknown function
Chain: B: PDB Molecule:hypothetical protein ta0289;
PDBTitle: structure of ta289, a cbs-rubredoxin-like protein, in its fe+2-bound2 state
5d2d4za3



99.9 16
Fold:CBS-domain pair
Superfamily:CBS-domain pair
Family:CBS-domain pair
6c6h1wA_



99.9 18
PDB header:unknown function
Chain: A: PDB Molecule:mj1004;
PDBTitle: crystal structure of protein mj1004 from mathanocaldococcus jannaschii
7d2o16a3



99.9 16
Fold:CBS-domain pair
Superfamily:CBS-domain pair
Family:CBS-domain pair
8c5aweA_



99.9 24
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative acetoin utilization protein, acetoin
PDBTitle: crystal structure of a hypothetical protein, ttha0829 from thermus2 thermophilus hb8, composed of cystathionine-beta-synthase (cbs) and3 aspartate-kinase chorismate-mutase tyra (act) domains
9c5nmuC_



99.9 27
PDB header:photosynthesis
Chain: C: PDB Molecule:cbs-cp12;
PDBTitle: structure of hexameric cbs-cp12 protein from bloom-forming2 cyanobacteria
10d3ddja1



99.9 13
Fold:CBS-domain pair
Superfamily:CBS-domain pair
Family:CBS-domain pair
11d1y5ha3



99.9 21
Fold:CBS-domain pair
Superfamily:CBS-domain pair
Family:CBS-domain pair
12c3lhhA_



99.9 17
PDB header:membrane protein
Chain: A: PDB Molecule:cbs domain protein;
PDBTitle: the crystal structure of cbs domain protein from shewanella2 oneidensis mr-1.
13c6cozB_



99.9 16
PDB header:transport protein
Chain: B: PDB Molecule:chloride channel protein 1;
PDBTitle: human clc-1 chloride ion channel, c-terminal cytosolic domain
14c3lfrB_



99.9 20
PDB header:transport protein
Chain: B: PDB Molecule:putative metal ion transporter;
PDBTitle: the crystal structure of a cbs domain from a putative metal ion2 transporter bound to amp from pseudomonas syringae to 1.55a
15c3jtfB_



99.9 17
PDB header:transport protein
Chain: B: PDB Molecule:magnesium and cobalt efflux protein;
PDBTitle: the cbs domain pair structure of a magnesium and cobalt efflux protein2 from bordetella parapertussis in complex with amp
16d1pvma4



99.9 19
Fold:CBS-domain pair
Superfamily:CBS-domain pair
Family:CBS-domain pair
17c4hg0A_



99.9 19
PDB header:transport protein
Chain: A: PDB Molecule:magnesium and cobalt efflux protein corc;
PDBTitle: crystal structure of magnesium and cobalt efflux protein corc,2 northeast structural genomics consortium (nesg) target er40
18d2ef7a1



99.9 25
Fold:CBS-domain pair
Superfamily:CBS-domain pair
Family:CBS-domain pair
19c2d4zB_



99.9 20
PDB header:transport protein
Chain: B: PDB Molecule:chloride channel protein;
PDBTitle: crystal structure of the cytoplasmic domain of the chloride channel2 clc-0
20d1pbja3



99.9 25
Fold:CBS-domain pair
Superfamily:CBS-domain pair
Family:CBS-domain pair
21c2pfiA_



not modelled 99.9 13
PDB header:transport protein
Chain: A: PDB Molecule:chloride channel protein clc-ka;
PDBTitle: crystal structure of the cytoplasmic domain of the human2 chloride channel clc-ka
22c3hf7A_



not modelled 99.9 13
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized cbs-domain protein;
PDBTitle: the crystal structure of a cbs-domain pair with bound amp from2 klebsiella pneumoniae to 2.75a
23d2yzia1



not modelled 99.9 19
Fold:CBS-domain pair
Superfamily:CBS-domain pair
Family:CBS-domain pair
24d2j9la1



not modelled 99.9 20
Fold:CBS-domain pair
Superfamily:CBS-domain pair
Family:CBS-domain pair
25c3i8nB_



not modelled 99.9 13
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein vp2912;
PDBTitle: a domain of a conserved functionally known protein from2 vibrio parahaemolyticus rimd 2210633.
26c4esyB_



not modelled 99.9 29
PDB header:membrane protein
Chain: B: PDB Molecule:cbs domain containing membrane protein;
PDBTitle: crystal structure of the cbs domain of cbs domain containing membrane2 protein from sphaerobacter thermophilus
27c4l3vB_



not modelled 99.9 19
PDB header:lyase
Chain: B: PDB Molecule:cystathionine beta-synthase;
PDBTitle: crystal structure of delta516-525 human cystathionine beta-synthase
28c3nqrD_



not modelled 99.9 19
PDB header:transport protein
Chain: D: PDB Molecule:magnesium and cobalt efflux protein corc;
PDBTitle: a putative cbs domain-containing protein from salmonella typhimurium2 lt2
29c3fnaA_



not modelled 99.9 16
PDB header:isomerase
Chain: A: PDB Molecule:possible arabinose 5-phosphate isomerase;
PDBTitle: crystal structure of the cbs pair of possible d-arabinose 5-phosphate2 isomerase yrbh from escherichia coli cft073
30d2yzqa1



not modelled 99.9 24
Fold:CBS-domain pair
Superfamily:CBS-domain pair
Family:CBS-domain pair
31c5tr1A_



not modelled 99.9 13
PDB header:transport protein
Chain: A: PDB Molecule:chloride channel protein;
PDBTitle: cryo-electron microscopy structure of a bovine clc-k chloride channel,2 alternate (class 2) conformation
32c3gbyA_



not modelled 99.9 11
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein ct1051;
PDBTitle: crystal structure of a protein with unknown function ct10512 from chlorobium tepidum
33c3lv9A_



not modelled 99.9 20
PDB header:membrane protein
Chain: A: PDB Molecule:putative transporter;
PDBTitle: crystal structure of cbs domain of a putative transporter from2 clostridium difficile 630
34c3ocmA_



not modelled 99.9 21
PDB header:membrane protein
Chain: A: PDB Molecule:putative membrane protein;
PDBTitle: the crystal structure of a domain from a possible membrane protein of2 bordetella parapertussis
35c3lqnA_



not modelled 99.9 11
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:cbs domain protein;
PDBTitle: crystal structure of cbs domain-containing protein of2 unknown function from bacillus anthracis str. ames ancestor
36c5ks7A_



not modelled 99.9 17
PDB header:hydrolase/hydrolase inhibitor
Chain: A: PDB Molecule:carnitine transport atp-binding protein opuca;
PDBTitle: crystal structure of listeria monocytogenes opuca cbs domain dimer in2 complex with cyclic-di-amp
37d2riha1



not modelled 99.9 22
Fold:CBS-domain pair
Superfamily:CBS-domain pair
Family:CBS-domain pair
38d1vr9a3



not modelled 99.9 21
Fold:CBS-domain pair
Superfamily:CBS-domain pair
Family:CBS-domain pair
39c3fhmD_



not modelled 99.9 43
PDB header:structural genomics, unknown function, n
Chain: D: PDB Molecule:uncharacterized protein atu1752;
PDBTitle: crystal structure of the cbs-domain containing protein atu1752 from2 agrobacterium tumefaciens
40c3pc3A_



not modelled 99.9 20
PDB header:lyase
Chain: A: PDB Molecule:cg1753, isoform a;
PDBTitle: full length structure of cystathionine beta-synthase from drosophila2 in complex with aminoacrylate
41d1yava3



not modelled 99.9 14
Fold:CBS-domain pair
Superfamily:CBS-domain pair
Family:CBS-domain pair
42c4gqvA_



not modelled 99.9 21
PDB header:protein binding
Chain: A: PDB Molecule:cbs domain-containing protein cbsx1, chloroplastic;
PDBTitle: crystal structure of cbs-pair protein, cbsx1 from arabidopsis thaliana
43c6qvcB_



not modelled 99.9 17
PDB header:membrane protein
Chain: B: PDB Molecule:chloride channel protein 1;
PDBTitle: cryoem structure of the human clc-1 chloride channel, cbs state 1
44c3ocoB_



not modelled 99.9 18
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:hemolysin-like protein containing cbs domains;
PDBTitle: the crystal structure of a hemolysin-like protein containing cbs2 domain of oenococcus oeni psu
45c1vr9B_



not modelled 99.9 21
PDB header:unknown function
Chain: B: PDB Molecule:cbs domain protein/act domain protein;
PDBTitle: crystal structure of a cbs domain pair/act domain protein (tm0892)2 from thermotoga maritima at 1.70 a resolution
46c3sl7B_



not modelled 99.9 20
PDB header:membrane protein
Chain: B: PDB Molecule:cbs domain-containing protein cbsx2;
PDBTitle: crystal structure of cbs-pair protein, cbsx2 from arabidopsis thaliana
47c2emqA_



not modelled 99.8 15
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical conserved protein;
PDBTitle: hypothetical conserved protein (gk1048) from geobacillus kaustophilus
48c3ocmB_



not modelled 99.8 22
PDB header:membrane protein
Chain: B: PDB Molecule:putative membrane protein;
PDBTitle: the crystal structure of a domain from a possible membrane protein of2 bordetella parapertussis
49c3fwrB_



not modelled 99.8 22
PDB header:transcription
Chain: B: PDB Molecule:yqzb protein;
PDBTitle: crystal structure of the cbs domains from the bacillus subtilis ccpn2 repressor complexed with adp
50c4iy3B_



not modelled 99.8 15
PDB header:metal transport
Chain: B: PDB Molecule:metal transporter cnnm4;
PDBTitle: structural and ligand binding properties of the bateman domain of2 human magnesium transporters cnnm2 and cnnm4
51c1yavB_



not modelled 99.8 13
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:hypothetical protein bsu14130;
PDBTitle: crystal structure of cbs domain-containing protein ykul2 from bacillus subtilis
52c4nocA_



not modelled 99.8 16
PDB header:signaling protein
Chain: A: PDB Molecule:putative signal transduction protein with cbs domains;
PDBTitle: the crystal structure of a cbs domain-containing protein of unknown2 function from kribbella flavida dsm 17836.
53d2ooxe1



not modelled 99.8 16
Fold:CBS-domain pair
Superfamily:CBS-domain pair
Family:CBS-domain pair
54c5g5rA_



not modelled 99.8 27
PDB header:hydrolase
Chain: A: PDB Molecule:site-2 protease;
PDBTitle: cbs domain tandem of site-2 protease from archaeoglobus fulgidus in2 complex with llama nanobody - apo form
55c3kpbA_



not modelled 99.8 22
PDB header:unknown function
Chain: A: PDB Molecule:uncharacterized protein mj0100;
PDBTitle: crystal structure of the cbs domain pair of protein mj01002 in complex with 5 -methylthioadenosine and s-adenosyl-l-3 methionine.
56d2nyca1



not modelled 99.8 22
Fold:CBS-domain pair
Superfamily:CBS-domain pair
Family:CBS-domain pair
57d2v8qe2



not modelled 99.8 13
Fold:CBS-domain pair
Superfamily:CBS-domain pair
Family:CBS-domain pair
58c2ouxB_



not modelled 99.8 24
PDB header:transport protein
Chain: B: PDB Molecule:magnesium transporter;
PDBTitle: crystal structure of the soluble part of a magnesium transporter
59d2v8qe1



not modelled 99.8 19
Fold:CBS-domain pair
Superfamily:CBS-domain pair
Family:CBS-domain pair
60d2ouxa2



not modelled 99.8 21
Fold:CBS-domain pair
Superfamily:CBS-domain pair
Family:CBS-domain pair
61c2qr1E_



not modelled 99.8 24
PDB header:transferase
Chain: E: PDB Molecule:protein c1556.08c;
PDBTitle: crystal structure of the adenylate sensor from amp-activated protein2 kinase in complex with adp
62c5ohxB_



not modelled 99.8 16
PDB header:lyase
Chain: B: PDB Molecule:cystathionine beta-synthase;
PDBTitle: structure of active cystathionine b-synthase from apis mellifera
63c2yvxD_



not modelled 99.8 23
PDB header:transport protein
Chain: D: PDB Molecule:mg2+ transporter mgte;
PDBTitle: crystal structure of magnesium transporter mgte
64c1zfjA_



not modelled 99.8 19
PDB header:oxidoreductase
Chain: A: PDB Molecule:inosine monophosphate dehydrogenase;
PDBTitle: inosine monophosphate dehydrogenase (impdh; ec 1.1.1.205) from2 streptococcus pyogenes
65c2p9mD_



not modelled 99.8 20
PDB header:structural genomics, unknown function
Chain: D: PDB Molecule:hypothetical protein mj0922;
PDBTitle: crystal structure of conserved hypothetical protein mj0922 from2 methanocaldococcus jannaschii dsm 2661
66c2v8qE_



not modelled 99.8 21
PDB header:transferase
Chain: E: PDB Molecule:5'-amp-activated protein kinase subunit gamma-1;
PDBTitle: crystal structure of the regulatory fragment of mammalian2 ampk in complexes with amp
67d2ooxe2



not modelled 99.8 27
Fold:CBS-domain pair
Superfamily:CBS-domain pair
Family:CBS-domain pair
68c3orgB_



not modelled 99.8 17
PDB header:transport protein
Chain: B: PDB Molecule:cmclc;
PDBTitle: crystal structure of a eukaryotic clc transporter
69c2qlvF_



not modelled 99.8 19
PDB header:transferase/protein binding
Chain: F: PDB Molecule:nuclear protein snf4;
PDBTitle: crystal structure of the heterotrimer core of the s. cerevisiae ampk2 homolog snf1
70c3kxrA_



not modelled 99.8 19
PDB header:transport protein
Chain: A: PDB Molecule:magnesium transporter, putative;
PDBTitle: structure of the cystathionine beta-synthase pair domain of the2 putative mg2+ transporter so5017 from shewanella oneidensis mr-1.
71c4z87B_



not modelled 99.8 22
PDB header:oxidoreductase
Chain: B: PDB Molecule:inosine-5'-monophosphate dehydrogenase;
PDBTitle: structure of the imp dehydrogenase from ashbya gossypii bound to gdp
72d3ddja2



not modelled 99.8 17
Fold:CBS-domain pair
Superfamily:CBS-domain pair
Family:CBS-domain pair
73c3ctuB_



not modelled 99.8 11
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:cbs domain protein;
PDBTitle: crystal structure of cbs domain protein from streptococcus2 pneumoniae tigr4
74d1o50a3



not modelled 99.8 13
Fold:CBS-domain pair
Superfamily:CBS-domain pair
Family:CBS-domain pair
75d2yvxa2



not modelled 99.8 23
Fold:CBS-domain pair
Superfamily:CBS-domain pair
Family:CBS-domain pair
76c3kh5A_



not modelled 99.8 44
PDB header:unknown function
Chain: A: PDB Molecule:protein mj1225;
PDBTitle: crystal structure of protein mj1225 from methanocaldococcus2 jannaschii, a putative archaeal homolog of g-ampk.
77c3tsdA_



not modelled 99.8 20
PDB header:oxidoreductase
Chain: A: PDB Molecule:inosine-5'-monophosphate dehydrogenase;
PDBTitle: crystal structure of inosine-5'-monophosphate dehydrogenase from2 bacillus anthracis str. ames complexed with xmp
78c3oi8B_



not modelled 99.8 13
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: the crystal structure of functionally unknown conserved protein domain2 from neisseria meningitidis mc58
79d1zfja4



not modelled 99.8 15
Fold:CBS-domain pair
Superfamily:CBS-domain pair
Family:CBS-domain pair
80c2yvzA_



not modelled 99.8 23
PDB header:transport protein
Chain: A: PDB Molecule:mg2+ transporter mgte;
PDBTitle: crystal structure of magnesium transporter mgte cytosolic domain,2 mg2+-free form
81c3l31B_



not modelled 99.7 24
PDB header:hydrolase
Chain: B: PDB Molecule:probable manganase-dependent inorganic
PDBTitle: crystal structure of the cbs and drtgg domains of the2 regulatory region of clostridium perfringens3 pyrophosphatase complexed with the inhibitor, amp
82c5x8oA_



not modelled 99.7 25
PDB header:oxidoreductase
Chain: A: PDB Molecule:inosine-5'-monophosphate dehydrogenase;
PDBTitle: crystal structure of gmp reductase from trypanosoma brucei with2 guanosine 5'-triphosphate
83c2yzqA_



not modelled 99.7 23
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative uncharacterized protein ph1780;
PDBTitle: crystal structure of uncharacterized conserved protein from2 pyrococcus horikoshii
84c4dqwB_



not modelled 99.7 28
PDB header:oxidoreductase
Chain: B: PDB Molecule:inosine-5'-monophosphate dehydrogenase;
PDBTitle: crystal structure analysis of pa3770
85c5iipA_



not modelled 99.7 16
PDB header:transport protein
Chain: A: PDB Molecule:glycine betaine/carnitine/choline abc transporter%2c atp-
PDBTitle: staphylococcus aureus opuca
86c4qfsC_



not modelled 99.7 17
PDB header:signaling protein/inhibitor/activator
Chain: C: PDB Molecule:5'-amp-activated protein kinase subunit gamma-1;
PDBTitle: structure of ampk in complex with br2-a769662core activator and2 staurosporine inhibitor
87c3ddjA_



not modelled 99.7 13
PDB header:amp-binding protein
Chain: A: PDB Molecule:cbs domain-containing protein;
PDBTitle: crystal structure of a cbs domain-containing protein in complex with2 amp (sso3205) from sulfolobus solfataricus at 1.80 a resolution
88d2yzqa2



not modelled 99.7 24
Fold:CBS-domain pair
Superfamily:CBS-domain pair
Family:CBS-domain pair
89c4fxsA_



not modelled 99.3 16
PDB header:oxidoreductase
Chain: A: PDB Molecule:inosine-5'-monophosphate dehydrogenase;
PDBTitle: inosine 5'-monophosphate dehydrogenase from vibrio cholerae complexed2 with imp and mycophenolic acid
90c3fioB_



not modelled 99.2 21
PDB header:nucleotide binding protein, metal bindin
Chain: B: PDB Molecule:a cystathionine beta-synthase domain protein
PDBTitle: crystal structure of a fragment of a cystathionine beta-2 synthase domain protein fused to a zn-ribbon-like domain
91d1jcna4



not modelled 98.9 18
Fold:CBS-domain pair
Superfamily:CBS-domain pair
Family:CBS-domain pair
92d1jr1a4



not modelled 98.0 17
Fold:CBS-domain pair
Superfamily:CBS-domain pair
Family:CBS-domain pair
93c2d7cD_



not modelled 60.7 29
PDB header:protein transport
Chain: D: PDB Molecule:rab11 family-interacting protein 3;
PDBTitle: crystal structure of human rab11 in complex with fip3 rab-2 binding domain
94c2m46A_



not modelled 39.0 12
PDB header:oxidoreductase
Chain: A: PDB Molecule:arsenate reductase, putative;
PDBTitle: solution nmr structure of sacol0876 from staphylococcus aureus col,2 nesg target zr353 and csgid target idp00841
95c2arfA_



not modelled 38.1 21
PDB header:hydrolase
Chain: A: PDB Molecule:wilson disease atpase;
PDBTitle: solution structure of the wilson atpase n-domain in the2 presence of atp
96c2hv8D_



not modelled 28.8 26
PDB header:protein transport
Chain: D: PDB Molecule:rab11 family-interacting protein 3;
PDBTitle: crystal structure of gtp-bound rab11 in complex with fip3
97c3gkxB_



not modelled 23.4 12
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:putative arsc family related protein;
PDBTitle: crystal structure of putative arsc family related protein from2 bacteroides fragilis
98c2koyA_



not modelled 22.8 21
PDB header:metal transport
Chain: A: PDB Molecule:copper-transporting atpase 2;
PDBTitle: structure of the e1064a mutant of the n-domain of wilson disease2 associated protein
99c4onxB_



not modelled 16.9 27
PDB header:transferase
Chain: B: PDB Molecule:sensor histidine kinase;
PDBTitle: 2.8 angstrom crystal structure of sensor domain of histidine kinase2 from clostridium perfringens.

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