Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2408_(PE24)_2706027_2706746
DateWed Aug 7 12:50:02 BST 2019
Unique Job ID19a93b9061cb3cd9
SequenceVLIARPDILC ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:34.539 Y:25.300 Z:57.884
Model (left) based on template c2g38A_
Top template information
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:pe family protein;
PDBTitle: a pe/ppe protein complex from mycobacterium tuberculosis
Confidence and coverage
Confidence: 99.9% Coverage: 31%
74 residues ( 31% of your sequence) have been modelled with 99.9% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c2g38A_



99.9 27
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:pe family protein;
PDBTitle: a pe/ppe protein complex from mycobacterium tuberculosis
2d2g38a1



99.9 27
Fold:Ferritin-like
Superfamily:PE/PPE dimer-like
Family:PE
3c5xfsA_



99.9 30
PDB header:protein transport
Chain: A: PDB Molecule:pe family protein pe8;
PDBTitle: crystal structure of pe8-ppe15 in complex with espg5 from m.2 tuberculosis
4c4wj2A_



41.3 13
PDB header:unknown function
Chain: A: PDB Molecule:antigen mtb48;
PDBTitle: mycobacterial protein
5d1lghb_



27.9 29
Fold:Light-harvesting complex subunits
Superfamily:Light-harvesting complex subunits
Family:Light-harvesting complex subunits
6c4f82A_



25.1 62
PDB header:oxidoreductase
Chain: A: PDB Molecule:thioredoxin reductase;
PDBTitle: x-ray crystal structure of a putative thioredoxin reductase from2 burkholderia cenocepacia
7c4or8A_



24.2 38
PDB header:viral protein
Chain: A: PDB Molecule:membrane-associated protein vp24;
PDBTitle: crystal structure of marburg virus vp24
8c4m0qB_



23.1 31
PDB header:viral protein
Chain: B: PDB Molecule:membrane-associated protein vp24;
PDBTitle: ebola virus vp24 structure
9c3onjA_



21.3 17
PDB header:protein transport
Chain: A: PDB Molecule:t-snare vti1;
PDBTitle: crystal structure of yeast vti1p_habc domain
10c1wrgA_



17.6 14
PDB header:membrane protein
Chain: A: PDB Molecule:light-harvesting protein b-880, beta chain;
PDBTitle: light-harvesting complex 1 beta subunit from wild-type2 rhodospirillum rubrum
11c5hbzE_



14.8 37
PDB header:hydrolase
Chain: E: PDB Molecule:non-structural protein 11;
PDBTitle: structure of eav nsp11 k170a mutant at 3.10a
12c6i52A_



14.6 64
PDB header:dna binding protein
Chain: A: PDB Molecule:replication factor a protein 3;
PDBTitle: yeast rpa bound to ssdna
13c6et5u_



12.0 21
PDB header:photosynthesis
Chain: U: PDB Molecule:light-harvesting protein b-1015 gamma chain;
PDBTitle: reaction centre light harvesting complex 1 from blc. virids
14c2w0cR_



11.8 14
PDB header:virus
Chain: R: PDB Molecule:protein p3;
PDBTitle: x-ray structure of the entire lipid-containing bacteriophage pm2
15c2drtA_



11.0 70
PDB header:structural protein
Chain: A: PDB Molecule:collagen like peptide;
PDBTitle: structure analysis of (pog)4-log-(pog)5
16c2drtB_



11.0 70
PDB header:structural protein
Chain: B: PDB Molecule:collagen like peptide;
PDBTitle: structure analysis of (pog)4-log-(pog)5
17c2drtC_



10.8 70
PDB header:structural protein
Chain: C: PDB Molecule:collagen like peptide;
PDBTitle: structure analysis of (pog)4-log-(pog)5
18d1wa8a1



10.8 17
Fold:Ferritin-like
Superfamily:EsxAB dimer-like
Family:ESAT-6 like
19d1o65a_



10.6 19
Fold:PK beta-barrel domain-like
Superfamily:PK beta-barrel domain-like
Family:MOSC (MOCO sulphurase C-terminal) domain
20c3u9iA_



10.4 15
PDB header:isomerase
Chain: A: PDB Molecule:mandelate racemase/muconate lactonizing enzyme, c-terminal
PDBTitle: the crystal structure of mandelate racemase/muconate lactonizing2 enzyme from roseiflexus sp.
21c2bfuL_



not modelled 9.8 20
PDB header:virus
Chain: L: PDB Molecule:cowpea mosaic virus, large (l) subunit;
PDBTitle: x-ray structure of cpmv top component
22c4agrB_



not modelled 9.5 47
PDB header:sugar binding protein
Chain: B: PDB Molecule:galectin;
PDBTitle: structure of a tetrameric galectin from cinachyrella sp. (ball2 sponge)
23c4rglA_



not modelled 8.5 21
PDB header:dna binding protein
Chain: A: PDB Molecule:filamentation induced by camp protein fic;
PDBTitle: crystal structure of a fic family protein (dde_2494) from2 desulfovibrio desulfuricans g20 at 2.70 a resolution
24c2k9yB_



not modelled 8.5 73
PDB header:transferase
Chain: B: PDB Molecule:ephrin type-a receptor 2;
PDBTitle: epha2 dimeric structure in the lipidic bicelle at ph 5.0
25c2k9yA_



not modelled 8.3 73
PDB header:transferase
Chain: A: PDB Molecule:ephrin type-a receptor 2;
PDBTitle: epha2 dimeric structure in the lipidic bicelle at ph 5.0
26d1ua7a1



not modelled 8.2 60
Fold:Glycosyl hydrolase domain
Superfamily:Glycosyl hydrolase domain
Family:alpha-Amylases, C-terminal beta-sheet domain
27c3sqsA_



not modelled 7.9 28
PDB header:isomerase
Chain: A: PDB Molecule:mandelate racemase/muconate lactonizing protein;
PDBTitle: crystal structure of a putative mandelate racemase/muconate2 lactonizing protein from dinoroseobacter shibae dfl 12
28d1wuea1



not modelled 7.6 27
Fold:TIM beta/alpha-barrel
Superfamily:Enolase C-terminal domain-like
Family:D-glucarate dehydratase-like
29c4k2xB_



not modelled 7.5 42
PDB header:oxidoreductase, flavoprotein
Chain: B: PDB Molecule:polyketide oxygenase/hydroxylase;
PDBTitle: oxys anhydrotetracycline hydroxylase from streptomyces rimosus
30c4cy8A_



not modelled 7.4 37
PDB header:oxidoreductase
Chain: A: PDB Molecule:2-hydroxybiphenyl 3-monooxygenase;
PDBTitle: 2-hydroxybiphenyl 3-monooxygenase (hbpa) in complex with fad
31d1vkma_



not modelled 7.4 33
Fold:Indigoidine synthase A-like
Superfamily:Indigoidine synthase A-like
Family:Indigoidine synthase A-like
32c3cawB_



not modelled 7.2 23
PDB header:oxidoreductase
Chain: B: PDB Molecule:o-succinylbenzoate synthase;
PDBTitle: crystal structure of o-succinylbenzoate synthase from bdellovibrio2 bacteriovorus liganded with mg
33d2h85a2



not modelled 6.8 46
Fold:EndoU-like
Superfamily:EndoU-like
Family:Nsp15 C-terminal domain-like
34c5cupB_



not modelled 6.7 44
PDB header:transferase
Chain: B: PDB Molecule:phosphate propanoyltransferase;
PDBTitle: structure of rhodopseudomonas palustris pdul - phosphate bound form
35c5dnlA_



not modelled 6.6 46
PDB header:lyase
Chain: A: PDB Molecule:imidazoleglycerol-phosphate dehydratase;
PDBTitle: crystal structure of igpd from pyrococcus furiosus in complex with2 (s)-c348
36d1mioa_



not modelled 6.5 25
Fold:Chelatase-like
Superfamily:"Helical backbone" metal receptor
Family:Nitrogenase iron-molybdenum protein
37c1cwxA_



not modelled 6.4 47
PDB header:viral protein
Chain: A: PDB Molecule:hepatitis c virus capsid protein;
PDBTitle: solution structure of the hepatitis c virus n-terminal2 capsid protein 2-45 [c-hcv(2-45)]
38d1pgw21



not modelled 6.3 25
Fold:Nucleoplasmin-like/VP (viral coat and capsid proteins)
Superfamily:Positive stranded ssRNA viruses
Family:Comoviridae-like VP
39c5x2hA_



not modelled 6.2 34
PDB header:hydrolase/rna/dna
Chain: A: PDB Molecule:crispr-associated endonuclease cas9;
PDBTitle: crystal structure of campylobacter jejuni cas9 in complex with sgrna2 and target dna (agaaaca pam)
40c2r0gB_



not modelled 6.2 48
PDB header:oxidoreductase
Chain: B: PDB Molecule:rebc;
PDBTitle: chromopyrrolic acid-soaked rebc with bound 7-carboxy-k252c
41c4mitG_



not modelled 6.2 50
PDB header:signaling protein
Chain: G: PDB Molecule:serine/threonine protein kinase pak, putative;
PDBTitle: crystal structure of e. histolytica racc bound to the ehpak4 pbd
42d1pgl21



not modelled 6.1 25
Fold:Nucleoplasmin-like/VP (viral coat and capsid proteins)
Superfamily:Positive stranded ssRNA viruses
Family:Comoviridae-like VP
43d1r0ma1



not modelled 6.1 32
Fold:TIM beta/alpha-barrel
Superfamily:Enolase C-terminal domain-like
Family:D-glucarate dehydratase-like
44c4mitE_



not modelled 6.0 50
PDB header:signaling protein
Chain: E: PDB Molecule:serine/threonine protein kinase pak, putative;
PDBTitle: crystal structure of e. histolytica racc bound to the ehpak4 pbd
45d1c1yb_



not modelled 6.0 49
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ras-binding domain, RBD
46c2boiA_



not modelled 5.9 31
PDB header:lectin
Chain: A: PDB Molecule:cv-iil lectin;
PDBTitle: 1.1a structure of chromobacterium violaceum lectin cv2l in2 complex with alpha-methyl-fucoside
47d1ny721



not modelled 5.8 20
Fold:Nucleoplasmin-like/VP (viral coat and capsid proteins)
Superfamily:Positive stranded ssRNA viruses
Family:Comoviridae-like VP
48c3lwzC_



not modelled 5.7 57
PDB header:lyase
Chain: C: PDB Molecule:3-dehydroquinate dehydratase;
PDBTitle: 1.65 angstrom resolution crystal structure of type ii 3-dehydroquinate2 dehydratase (aroq) from yersinia pestis
49d1h05a_



not modelled 5.7 43
Fold:Flavodoxin-like
Superfamily:Type II 3-dehydroquinate dehydratase
Family:Type II 3-dehydroquinate dehydratase
50c3iv4A_



not modelled 5.5 27
PDB header:oxidoreductase
Chain: A: PDB Molecule:putative oxidoreductase;
PDBTitle: a putative oxidoreductase with a thioredoxin fold
51c6cv6L_



not modelled 5.5 29
PDB header:lyase
Chain: L: PDB Molecule:3-dehydroquinate dehydratase;
PDBTitle: crystal structure of 3-dehydroquinate dehydratase, type ii, from2 burkholderia phymatum stm815
52d1gqoa_



not modelled 5.5 21
Fold:Flavodoxin-like
Superfamily:Type II 3-dehydroquinate dehydratase
Family:Type II 3-dehydroquinate dehydratase
53c3u80A_



not modelled 5.4 43
PDB header:unknown function
Chain: A: PDB Molecule:3-dehydroquinate dehydratase, type ii;
PDBTitle: 1.60 angstrom resolution crystal structure of a 3-dehydroquinate2 dehydratase-like protein from bifidobacterium longum
54c5n6yD_



not modelled 5.3 24
PDB header:oxidoreductase
Chain: D: PDB Molecule:nitrogenase vanadium-iron protein alpha chain;
PDBTitle: azotobacter vinelandii vanadium nitrogenase
55c3n8kG_



not modelled 5.3 43
PDB header:lyase
Chain: G: PDB Molecule:3-dehydroquinate dehydratase;
PDBTitle: type ii dehydroquinase from mycobacterium tuberculosis complexed with2 citrazinic acid
56c2uygF_



not modelled 5.3 43
PDB header:lyase
Chain: F: PDB Molecule:3-dehydroquinate dehydratase;
PDBTitle: crystallogaphic structure of the typeii 3-dehydroquinase from thermus2 thermophilus
57d1m3ya1



not modelled 5.2 35
Fold:Nucleoplasmin-like/VP (viral coat and capsid proteins)
Superfamily:Group II dsDNA viruses VP
Family:Major capsid protein vp54
58c5yhhA_



not modelled 5.1 30
PDB header:oxidoreductase
Chain: A: PDB Molecule:uncharacterized conserved protein yiim;
PDBTitle: crystal structure of yiim from geobacillus stearothermophilus
59c3witA_



not modelled 5.1 64
PDB header:structural protein
Chain: A: PDB Molecule:putative vgr protein;
PDBTitle: crystal structure of the c-terminal region of vgrg1 from e. coli o1572 edl933
60c3kipU_



not modelled 5.1 50
PDB header:lyase
Chain: U: PDB Molecule:3-dehydroquinase, type ii;
PDBTitle: crystal structure of type-ii 3-dehydroquinase from c. albicans

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