Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2412_(rpsT)_2710085_2710345
DateWed Aug 7 12:50:03 BST 2019
Unique Job ID67f9b08c895e44f3
SequenceVANIKSQQKR ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:42.584 Y:29.864 Z:54.540
Model (left) based on template c5o5jT_
Top template information
PDB header:ribosome
Chain: T: PDB Molecule:30s ribosomal protein s20;
PDBTitle: structure of the 30s small ribosomal subunit from mycobacterium2 smegmatis
Confidence and coverage
Confidence:100.0% Coverage: 99%
85 residues ( 99% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c5o5jT_



100.0 81
PDB header:ribosome
Chain: T: PDB Molecule:30s ribosomal protein s20;
PDBTitle: structure of the 30s small ribosomal subunit from mycobacterium2 smegmatis
2c5mmjt_



100.0 41
PDB header:ribosome
Chain: T: PDB Molecule:
PDBTitle: structure of the small subunit of the chloroplast ribosome
3d2gy9t1



100.0 40
Fold:Spectrin repeat-like
Superfamily:Ribosomal protein S20
Family:Ribosomal protein S20
4d2uubt1



100.0 35
Fold:Spectrin repeat-like
Superfamily:Ribosomal protein S20
Family:Ribosomal protein S20
5c3bbnT_



100.0 31
PDB header:ribosome
Chain: T: PDB Molecule:ribosomal protein s20;
PDBTitle: homology model for the spinach chloroplast 30s subunit fitted to 9.4a2 cryo-em map of the 70s chlororibosome.
6c5jnoB_



60.1 23
PDB header:cell cycle
Chain: B: PDB Molecule:dna excision repair protein ercc-6-like;
PDBTitle: crystal structure of the bd1-ntpr complex from bend3 and pich
7c6a09C_



52.9 23
PDB header:unknown function
Chain: C: PDB Molecule:yfdx protein;
PDBTitle: salmonella typhi yfdx in the p222 space group
8c5z1nA_



26.0 28
PDB header:protein binding
Chain: A: PDB Molecule:g-protein interacting protein 1;
PDBTitle: crystal structure of c terminal region of g-protein interacting2 protein 1 (gip1) from dictyostelium discoideum
9c5tgyA_



21.8 37
PDB header:unknown function
Chain: A: PDB Molecule:ps1;
PDBTitle: nmr structure of holo-ps1
10d2oo2a1



21.6 19
Fold:immunoglobulin/albumin-binding domain-like
Superfamily:AF1782-like
Family:AF1782-like
11d1h6qa_



21.6 9
Fold:Mss4-like
Superfamily:Mss4-like
Family:Translationally controlled tumor protein TCTP (histamine-releasing factor)
12c3dzaB_



21.2 23
PDB header:unknown function
Chain: B: PDB Molecule:uncharacterized putative membrane protein;
PDBTitle: crystal structure of a putative membrane protein of unknown function2 (yfdx) from klebsiella pneumoniae subsp. at 1.65 a resolution
13c5ig4A_



20.4 13
PDB header:transferase
Chain: A: PDB Molecule:predicted protein;
PDBTitle: crystal structure of n. vectensis camkii-a hub
14d2k54a1



19.9 23
Fold:Cystatin-like
Superfamily:NTF2-like
Family:Atu0742-like
15d1txja_



19.9 2
Fold:Mss4-like
Superfamily:Mss4-like
Family:Translationally controlled tumor protein TCTP (histamine-releasing factor)
16c2oxoA_



19.5 21
PDB header:dna binding protein
Chain: A: PDB Molecule:integrase;
PDBTitle: crystallization and structure determination of the core-2 binding domain of bacteriophage lambda integrase
17c3lysC_



17.6 9
PDB header:recombination
Chain: C: PDB Molecule:prophage pi2 protein 01, integrase;
PDBTitle: crystal structure of the n-terminal domain of the prophage pi2 protein2 01 (integrase) from lactococcus lactis, northeast structural genomics3 consortium target kr124f
18c2kj8A_



17.4 14
PDB header:dna binding protein
Chain: A: PDB Molecule:putative prophage cps-53 integrase;
PDBTitle: nmr structure of fragment 87-196 from the putative phage2 integrase ints of e. coli: northeast structural genomics3 consortium target er652a, psi-2
19c3k1sE_



16.4 21
PDB header:transferase
Chain: E: PDB Molecule:pts system, cellobiose-specific iia component;
PDBTitle: crystal structure of the pts cellobiose specific enzyme iia from2 bacillus anthracis
20c2dl1A_



15.3 18
PDB header:protein transport
Chain: A: PDB Molecule:spartin;
PDBTitle: solution structure of the mit domain from human spartin
21c2khvA_



not modelled 15.3 15
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:phage integrase;
PDBTitle: solution nmr structure of protein nmul_a0922 from2 nitrosospira multiformis. northeast structural genomics3 consortium target nmr38b.
22c1xb2B_



not modelled 14.9 25
PDB header:translation
Chain: B: PDB Molecule:elongation factor ts, mitochondrial;
PDBTitle: crystal structure of bos taurus mitochondrial elongation2 factor tu/ts complex
23d3en8a1



not modelled 14.5 28
Fold:Cystatin-like
Superfamily:NTF2-like
Family:Rpa4348-like
24d1yz1a1



not modelled 14.1 5
Fold:Mss4-like
Superfamily:Mss4-like
Family:Translationally controlled tumor protein TCTP (histamine-releasing factor)
25c5h1nB_



not modelled 13.3 15
PDB header:unknown function
Chain: B: PDB Molecule:upf0253 protein yaep;
PDBTitle: crystal structure of sf173 from shigella flexneri
26d1h7ca_



not modelled 12.5 16
Fold:Spectrin repeat-like
Superfamily:Tubulin chaperone cofactor A
Family:Tubulin chaperone cofactor A
27d2e2aa_



not modelled 10.2 30
Fold:Spectrin repeat-like
Superfamily:Enzyme IIa from lactose specific PTS, IIa-lac
Family:Enzyme IIa from lactose specific PTS, IIa-lac
28c5cxoA_



not modelled 9.7 16
PDB header:hydrolase
Chain: A: PDB Molecule:epoxide hydrolase;
PDBTitle: intriguing role of epoxide hydrolase/cyclase-like enzyme salbiii in2 pyran ring formation in polyether salinomycin
29c3kspA_



not modelled 9.0 21
PDB header:unknown function
Chain: A: PDB Molecule:calcium/calmodulin-dependent kinase ii association domain;
PDBTitle: crystal structure of a putative ca/calmodulin-dependent kinase ii2 association domain (exig_1688) from exiguobacterium sibiricum 255-153 at 2.59 a resolution
30c2khqA_



not modelled 9.0 20
PDB header:dna binding protein
Chain: A: PDB Molecule:integrase;
PDBTitle: solution nmr structure of a phage integrase ssp19472 fragment 59-159 from staphylococcus saprophyticus,3 northeast structural genomics consortium target syr103b
31c6j2yA_



not modelled 8.6 16
PDB header:translation
Chain: A: PDB Molecule:notctp;
PDBTitle: solution structure of translationally controlled tumor protein from2 photosynthetic microalga nannochloropsis oceanica
32c6of9G_



not modelled 8.5 19
PDB header:unknown function
Chain: G: PDB Molecule:camkii hub;
PDBTitle: structure of the chlamydamonas reinhardtii camkii hub homology domain
33c3soyA_



not modelled 8.4 13
PDB header:membrane protein
Chain: A: PDB Molecule:ntf2-like superfamily protein;
PDBTitle: nuclear transport factor 2 (ntf2-like) superfamily protein from2 salmonella enterica subsp. enterica serovar typhimurium str. lt2
34d1ohpa1



not modelled 8.3 24
Fold:Cystatin-like
Superfamily:NTF2-like
Family:Ketosteroid isomerase-like
35d1u00a1



not modelled 8.3 13
Fold:immunoglobulin/albumin-binding domain-like
Superfamily:Heat shock protein 70kD (HSP70), C-terminal subdomain
Family:Heat shock protein 70kD (HSP70), C-terminal subdomain
36d2a15a1



not modelled 8.0 19
Fold:Cystatin-like
Superfamily:NTF2-like
Family:Ketosteroid isomerase-like
37c2kj9A_



not modelled 7.9 13
PDB header:dna binding protein
Chain: A: PDB Molecule:integrase;
PDBTitle: nmr structure of intb phage-integrase-like protein fragment2 90-199 from erwinia carotova subsp. atroseptica: northeast3 structural genomics consortium target ewr217e
38c4k12B_



not modelled 7.3 16
PDB header:immune system/choline binding protein
Chain: B: PDB Molecule:choline binding protein a;
PDBTitle: structural basis for host specificity of factor h binding by2 streptococcus pneumoniae
39c6h5lA_



not modelled 7.3 9
PDB header:oxidoreductase
Chain: A: PDB Molecule:similar to hydroxylamine oxidoreductase;
PDBTitle: kuenenia stuttgartiensis reducing hao-like protein complex2 kustc0457/kustc0458
40c4bgoA_



not modelled 6.9 34
PDB header:hydrolase
Chain: A: PDB Molecule:efem m75 peptidase;
PDBTitle: structural and functional role of the imelysin-like protein2 efem from pseudomonas syringae pv. syringae and3 implications in bacterial iron transport
41d2f86b1



not modelled 6.9 20
Fold:Cystatin-like
Superfamily:NTF2-like
Family:Association domain of calcium/calmodulin-dependent protein kinase type II alpha subunit, CAMK2A
42c3l8rA_



not modelled 6.7 23
PDB header:transferase
Chain: A: PDB Molecule:putative pts system, cellobiose-specific iia
PDBTitle: the crystal structure of ptca from s. mutans
43c4adzA_



not modelled 6.7 8
PDB header:transcription
Chain: A: PDB Molecule:csor;
PDBTitle: crystal structure of the apo form of a copper-sensitive operon2 regulator (csor) protein from streptomyces lividans
44d3bb9a1



not modelled 6.6 27
Fold:Cystatin-like
Superfamily:NTF2-like
Family:SO0125-like
45c4n4jA_



not modelled 6.5 11
PDB header:oxidoreductase
Chain: A: PDB Molecule:hydroxylamine oxidoreductase;
PDBTitle: kuenenia stuttgartiensis hydroxylamine oxidoreductase
46c2odmA_



not modelled 6.3 17
PDB header:unknown function
Chain: A: PDB Molecule:upf0358 protein mw0995;
PDBTitle: crystal structure of s. aureus ylan, an essential leucine rich protein2 involved in the control of cell shape
47c3kh1B_



not modelled 6.2 23
PDB header:hydrolase
Chain: B: PDB Molecule:predicted metal-dependent phosphohydrolase;
PDBTitle: crystal structure of predicted metal-dependent phosphohydrolase2 (zp_00055740.2) from magnetospirillum magnetotacticum ms-1 at 1.37 a3 resolution
48d256ba_



not modelled 6.1 14
Fold:Four-helical up-and-down bundle
Superfamily:Cytochromes
Family:Cytochrome b562
49c5fmnB_



not modelled 6.0 15
PDB header:dna binding protein
Chain: B: PDB Molecule:inrs;
PDBTitle: the nickel-responsive transcriptional regulator inrs
50c4k7bA_



not modelled 6.0 23
PDB header:photosynthesis
Chain: A: PDB Molecule:extrinsic protein in photosystem ii;
PDBTitle: crystal structure of extrinsic protein in photosystem ii
51c3f14A_



not modelled 6.0 13
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized ntf2-like protein;
PDBTitle: crystal structure of ntf2-like protein of unknown function2 (yp_680363.1) from cytophaga hutchinsonii atcc 33406 at 1.45 a3 resolution
52c3zsuA_



not modelled 6.0 12
PDB header:photosynthesis
Chain: A: PDB Molecule:tll2057 protein;
PDBTitle: structure of the cyanoq protein from thermosynechococcus elongatus
53c1wcrA_



not modelled 6.0 23
PDB header:transferase
Chain: A: PDB Molecule:pts system, n, n'-diacetylchitobiose-specific
PDBTitle: trimeric structure of the enzyme iia from escherichia coli2 phosphotransferase system specific for n,n'-3 diacetylchitobiose
54c5x9jB_



not modelled 6.0 19
PDB header:isomerase
Chain: B: PDB Molecule:prhc;
PDBTitle: strucutre of prhc from penicillium brasilianum nbrc 6234
55c4u13B_



not modelled 5.8 19
PDB header:transferase
Chain: B: PDB Molecule:putative polyketide cyclase sma1630;
PDBTitle: crystal structure of putative polyketide cyclase (protein sma1630)2 from sinorhizobium meliloti at 2.3 a resolution
56c5ig5E_



not modelled 5.7 10
PDB header:transferase
Chain: E: PDB Molecule:camkii-b hub;
PDBTitle: crystal structure of n. vectensis camkii-b hub at ph 4.2
57d1aipc1



not modelled 5.6 39
Fold:RuvA C-terminal domain-like
Superfamily:UBA-like
Family:TS-N domain
58d2ux0a1



not modelled 5.6 20
Fold:Cystatin-like
Superfamily:NTF2-like
Family:Association domain of calcium/calmodulin-dependent protein kinase type II alpha subunit, CAMK2A
59c2kkvA_



not modelled 5.5 21
PDB header:dna binding protein
Chain: A: PDB Molecule:integrase;
PDBTitle: solution nmr structure of an integrase domain from protein spa42882 from salmonella enterica, northeast structural genomics consortium3 target slr105h
60c3i0yC_



not modelled 5.4 24
PDB header:isomerase
Chain: C: PDB Molecule:putative polyketide cyclase;
PDBTitle: crystal structure of a putative polyketide cyclase (xcc0381) from2 xanthomonas campestris pv. campestris at 1.50 a resolution
61d2pv7a1



not modelled 5.1 9
Fold:6-phosphogluconate dehydrogenase C-terminal domain-like
Superfamily:6-phosphogluconate dehydrogenase C-terminal domain-like
Family:TyrA dimerization domain-like
62c3aaiB_



not modelled 5.0 10
PDB header:transcription
Chain: B: PDB Molecule:copper homeostasis operon regulatory protein;
PDBTitle: x-ray crystal structure of csor from thermus thermophilus hb8

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