Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2415c_(-)_2712901_2713794
DateWed Aug 7 12:50:03 BST 2019
Unique Job IDcbb9130136e011da
SequenceMRTELPAERL ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:29.193 Y:24.213 Z:35.946
Model (left) based on template c5ol9A_
Top template information
PDB header:transcription
Chain: A: PDB Molecule:transcription elongation factor, mitochondrial;
PDBTitle: structure of human mitochondrial transcription elongation factor2 (tefm) n-terminal domain
Confidence and coverage
Confidence: 99.8% Coverage: 26%
77 residues ( 26% of your sequence) have been modelled with 99.8% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
149 residues ( 50%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

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#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c5ol9A_
99.8 18
PDB header:transcription
Chain: A: PDB Molecule:transcription elongation factor, mitochondrial;
PDBTitle: structure of human mitochondrial transcription elongation factor2 (tefm) n-terminal domain
2d3bzka1
99.8 32
Fold:SAM domain-like
Superfamily:RuvA domain 2-like
Family:Tex HhH-containing domain-like
3d2edua1
99.7 32
Fold:SAM domain-like
Superfamily:RuvA domain 2-like
Family:ComEA-like
4d2duya1
99.7 47
Fold:SAM domain-like
Superfamily:RuvA domain 2-like
Family:ComEA-like
5c1s5lu_
99.7 18
PDB header:photosynthesis
Chain: U: PDB Molecule:photosystem ii 12 kda extrinsic protein;
PDBTitle: architecture of the photosynthetic oxygen evolving center
6d2axtu1
99.7 22
Fold:SAM domain-like
Superfamily:PsbU/PolX domain-like
Family:PsbU-like
7c2oceA_
99.6 32
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein pa5201;
PDBTitle: crystal structure of tex family protein pa5201 from2 pseudomonas aeruginosa
8c6gmhM_
99.4 24
PDB header:transcription
Chain: M: PDB Molecule:transcription elongation factor spt6,transcription
PDBTitle: structure of activated transcription complex pol ii-dsif-paf-spt6
9c3psiA_
99.4 15
PDB header:transcription
Chain: A: PDB Molecule:transcription elongation factor spt6;
PDBTitle: crystal structure of the spt6 core domain from saccharomyces2 cerevisiae, form spt6(239-1451)
10c3psfA_
99.3 16
PDB header:transcription
Chain: A: PDB Molecule:transcription elongation factor spt6;
PDBTitle: crystal structure of the spt6 core domain from saccharomyces2 cerevisiae, form spt6(236-1259)
11c2j58G_
98.7 24
PDB header:membrane protein
Chain: G: PDB Molecule:outer membrane lipoprotein wza;
PDBTitle: the structure of wza
12c2w8iG_
98.5 24
PDB header:membrane protein
Chain: G: PDB Molecule:putative outer membrane lipoprotein wza;
PDBTitle: crystal structure of wza24-345.
13d2bgwa1
98.5 25
Fold:SAM domain-like
Superfamily:RuvA domain 2-like
Family:Hef domain-like
14d1x2ia1
98.2 22
Fold:SAM domain-like
Superfamily:RuvA domain 2-like
Family:Hef domain-like
15c1kftA_
98.1 22
PDB header:dna binding protein
Chain: A: PDB Molecule:excinuclease abc subunit c;
PDBTitle: solution structure of the c-terminal domain of uvrc from e-2 coli
16d1kfta_
98.1 22
Fold:SAM domain-like
Superfamily:RuvA domain 2-like
Family:Excinuclease UvrC C-terminal domain
17c5vtmX_
98.1 33
PDB header:transport protein
Chain: X: PDB Molecule:type ii secretion system protein k;
PDBTitle: the crystal structure of minor pseudopilin ternary complex of xcpvwx2 from the type 2 secretion system of pseudomonas aeruginosa
18d2i1qa1
97.6 32
Fold:SAM domain-like
Superfamily:Rad51 N-terminal domain-like
Family:DNA repair protein Rad51, N-terminal domain
19c3ci0K_
97.6 23
PDB header:protein transport
Chain: K: PDB Molecule:pseudopilin gspk;
PDBTitle: the crystal structure of the gspk-gspi-gspj complex from2 enterotoxigenic escherichia coli type 2 secretion system
20c2hnhA_
97.6 27
PDB header:transferase
Chain: A: PDB Molecule:dna polymerase iii alpha subunit;
PDBTitle: crystal structure of the catalytic alpha subunit of e. coli2 replicative dna polymerase iii
21c2bcuA_
not modelled 97.6 23
PDB header:transferase, lyase/dna
Chain: A: PDB Molecule:dna polymerase lambda;
PDBTitle: dna polymerase lambda in complex with a dna duplex2 containing an unpaired damp and a t:t mismatch
22d1pzna1
not modelled 97.5 28
Fold:SAM domain-like
Superfamily:Rad51 N-terminal domain-like
Family:DNA repair protein Rad51, N-terminal domain
23c3p42D_
not modelled 97.5 28
PDB header:unknown function
Chain: D: PDB Molecule:predicted protein;
PDBTitle: structure of gfcc (ymcb), protein encoded by the e. coli group 42 capsule operon
24d3ci0k2
not modelled 97.5 19
Fold:SAM domain-like
Superfamily:GspK insert domain-like
Family:GspK insert domain-like
25c3e0dA_
not modelled 97.4 27
PDB header:transferase/dna
Chain: A: PDB Molecule:dna polymerase iii subunit alpha;
PDBTitle: insights into the replisome from the crystral structure of2 the ternary complex of the eubacterial dna polymerase iii3 alpha-subunit
26c5lewA_
not modelled 97.4 16
PDB header:transferase
Chain: A: PDB Molecule:dna polymerase iii subunit alpha;
PDBTitle: dna polymerase
27c3f2cA_
not modelled 97.4 31
PDB header:transferase/dna
Chain: A: PDB Molecule:geobacillus kaustophilus dna polc;
PDBTitle: dna polymerase polc from geobacillus kaustophilus complex with dna,2 dgtp and mn
28c2i5hA_
not modelled 97.4 36
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein af1531;
PDBTitle: crystal structure of af1531 from archaeoglobus fulgidus,2 pfam duf655
29d2i5ha1
not modelled 97.4 36
Fold:AF1531-like
Superfamily:AF1531-like
Family:AF1531-like
30c3auoB_
not modelled 97.4 29
PDB header:transferase/dna
Chain: B: PDB Molecule:dna polymerase beta family (x family);
PDBTitle: dna polymerase x from thermus thermophilus hb8 ternary complex with 1-2 nt gapped dna and ddgtp
31d2a1jb1
not modelled 97.3 15
Fold:SAM domain-like
Superfamily:RuvA domain 2-like
Family:Hef domain-like
32c1ixrA_
not modelled 97.3 22
PDB header:hydrolase
Chain: A: PDB Molecule:holliday junction dna helicase ruva;
PDBTitle: ruva-ruvb complex
33c8iczA_
not modelled 97.3 33
PDB header:transferase/dna
Chain: A: PDB Molecule:protein (dna polymerase beta (e.c.2.7.7.7));
PDBTitle: dna polymerase beta (pol b) (e.c.2.7.7.7) complexed with2 seven base pairs of dna; soaked in the presence of of datp3 (1 millimolar), mncl2 (5 millimolar), and lithium sulfate4 (75 millimolar)
34c5xf9E_
not modelled 97.3 28
PDB header:oxidoreductase
Chain: E: PDB Molecule:nad-reducing hydrogenase;
PDBTitle: crystal structure of nad+-reducing [nife]-hydrogenase in the air-2 oxidized state
35d1cuka2
not modelled 97.3 26
Fold:SAM domain-like
Superfamily:RuvA domain 2-like
Family:DNA helicase RuvA subunit, middle domain
36c5fkvA_
not modelled 97.2 24
PDB header:transferase
Chain: A: PDB Molecule:dna polymerase iii subunit alpha;
PDBTitle: cryo-em structure of the e. coli replicative dna polymerase complex2 bound to dna (dna polymerase iii alpha, beta, epsilon, tau complex)
37c6q9gD_
not modelled 97.2 22
PDB header:oxidoreductase
Chain: D: PDB Molecule:nadh-quinone oxidoreductase subunit f;
PDBTitle: crystal structure of reduced aquifex aeolicus nadh-quinone2 oxidoreductase subunits nuoe g129d and nuof bound to nadh
38d2fug13
not modelled 97.2 26
Fold:beta-Grasp (ubiquitin-like)
Superfamily:Nqo1 middle domain-like
Family:Nqo1 middle domain-like
39d1ixra1
not modelled 97.2 22
Fold:SAM domain-like
Superfamily:RuvA domain 2-like
Family:DNA helicase RuvA subunit, middle domain
40c2w9mB_
not modelled 97.1 25
PDB header:dna replication
Chain: B: PDB Molecule:polymerase x;
PDBTitle: structure of family x dna polymerase from deinococcus2 radiodurans
41c5lc5F_
not modelled 97.1 20
PDB header:oxidoreductase
Chain: F: PDB Molecule:nadh dehydrogenase [ubiquinone] flavoprotein 1,
PDBTitle: structure of mammalian respiratory complex i, class2
42c1kdhA_
not modelled 97.1 19
PDB header:transferase/dna
Chain: A: PDB Molecule:terminal deoxynucleotidyltransferase short
PDBTitle: binary complex of murine terminal deoxynucleotidyl2 transferase with a primer single stranded dna
43c2zj8A_
not modelled 97.0 27
PDB header:hydrolase
Chain: A: PDB Molecule:putative ski2-type helicase;
PDBTitle: archaeal dna helicase hjm apo state in form 2
44c2ihmA_
not modelled 96.9 25
PDB header:transferase/dna
Chain: A: PDB Molecule:dna polymerase mu;
PDBTitle: polymerase mu in ternary complex with gapped 11mer dna duplex and2 bound incoming nucleotide
45c2mutA_
not modelled 96.9 18
PDB header:hydrolase
Chain: A: PDB Molecule:dna excision repair protein ercc-1;
PDBTitle: solution structure of the f231l mutant ercc1-xpf dimerization region
46d1bvsa2
not modelled 96.9 33
Fold:SAM domain-like
Superfamily:RuvA domain 2-like
Family:DNA helicase RuvA subunit, middle domain
47d1dgsa1
not modelled 96.8 16
Fold:SAM domain-like
Superfamily:RuvA domain 2-like
Family:NAD+-dependent DNA ligase, domain 3
48c2fugA_
not modelled 96.8 23
PDB header:oxidoreductase
Chain: A: PDB Molecule:nadh-quinone oxidoreductase chain 1;
PDBTitle: crystal structure of the hydrophilic domain of respiratory complex i2 from thermus thermophilus
49d2aq0a1
not modelled 96.7 16
Fold:SAM domain-like
Superfamily:RuvA domain 2-like
Family:Hef domain-like
50c4bxoA_
not modelled 96.6 17
PDB header:hydrolase/dna
Chain: A: PDB Molecule:fanconi anemia group m protein;
PDBTitle: architecture and dna recognition elements of the fanconi anemia fancm-2 faap24 complex
51c1d8lA_
not modelled 96.6 26
PDB header:gene regulation
Chain: A: PDB Molecule:protein (holliday junction dna helicase ruva);
PDBTitle: e. coli holliday junction binding protein ruva nh2 region lacking2 domain iii
52c2h5xA_
not modelled 96.4 33
PDB header:dna binding protein
Chain: A: PDB Molecule:holliday junction atp-dependent dna helicase ruva;
PDBTitle: ruva from mycobacterium tuberculosis
53c2nrzB_
not modelled 96.4 24
PDB header:hydrolase
Chain: B: PDB Molecule:uvrabc system protein c;
PDBTitle: crystal structure of the c-terminal half of uvrc bound to its2 catalytic divalent cation
54c1ixrB_
not modelled 96.4 22
PDB header:hydrolase
Chain: B: PDB Molecule:holliday junction dna helicase ruva;
PDBTitle: ruva-ruvb complex
55c1hjpA_
not modelled 96.1 26
PDB header:dna recombination
Chain: A: PDB Molecule:ruva;
PDBTitle: holliday junction binding protein ruva from e. coli
56d1szpa1
not modelled 96.0 19
Fold:SAM domain-like
Superfamily:Rad51 N-terminal domain-like
Family:DNA repair protein Rad51, N-terminal domain
57c2bhnD_
not modelled 96.0 34
PDB header:hydrolase
Chain: D: PDB Molecule:xpf endonuclease;
PDBTitle: xpf from aeropyrum pernix
58c4bxoB_
not modelled 95.6 22
PDB header:hydrolase/dna
Chain: B: PDB Molecule:fanconi anemia-associated protein of 24 kda;
PDBTitle: architecture and dna recognition elements of the fanconi anemia fancm-2 faap24 complex
59d2fmpa1
not modelled 95.6 19
Fold:SAM domain-like
Superfamily:DNA polymerase beta, N-terminal domain-like
Family:DNA polymerase beta, N-terminal domain-like
60d1jmsa1
not modelled 95.4 11
Fold:SAM domain-like
Superfamily:DNA polymerase beta, N-terminal domain-like
Family:DNA polymerase beta, N-terminal domain-like
61c4p4oA_
not modelled 95.4 28
PDB header:transferase/dna
Chain: A: PDB Molecule:dna polymerase beta;
PDBTitle: crystal structure of leishmania infantum polymerase beta: ternary gap2 complex
62c2lyhA_
not modelled 95.3 18
PDB header:dna binding protein
Chain: A: PDB Molecule:fanconi anemia-associated protein of 24 kda;
PDBTitle: structure of faap24 residues 141-215
63d1b22a_
not modelled 95.1 17
Fold:SAM domain-like
Superfamily:Rad51 N-terminal domain-like
Family:DNA repair protein Rad51, N-terminal domain
64c1b22A_
not modelled 95.1 17
PDB header:dna binding protein
Chain: A: PDB Molecule:dna repair protein rad51;
PDBTitle: rad51 (n-terminal domain)
65c2csdB_
not modelled 94.5 29
PDB header:isomerase
Chain: B: PDB Molecule:topoisomerase v;
PDBTitle: crystal structure of topoisomerase v (61 kda fragment)
66c1dgsB_
not modelled 94.4 23
PDB header:ligase
Chain: B: PDB Molecule:dna ligase;
PDBTitle: crystal structure of nad+-dependent dna ligase from t.2 filiformis
67c1v9pB_
not modelled 94.3 23
PDB header:ligase
Chain: B: PDB Molecule:dna ligase;
PDBTitle: crystal structure of nad+-dependent dna ligase
68c2owoA_
not modelled 94.2 21
PDB header:ligase/dna
Chain: A: PDB Molecule:dna ligase;
PDBTitle: last stop on the road to repair: structure of e.coli dna ligase bound2 to nicked dna-adenylate
69c4glxA_
not modelled 94.2 25
PDB header:ligase/ligase inhibitor/dna
Chain: A: PDB Molecule:dna ligase;
PDBTitle: dna ligase a in complex with inhibitor
70d3ci0k1
not modelled 94.2 22
Fold:SAM domain-like
Superfamily:GspK insert domain-like
Family:GspK insert domain-like
71d2p6ra2
not modelled 94.0 19
Fold:Sec63 N-terminal domain-like
Superfamily:Sec63 N-terminal domain-like
Family:Achaeal helicase C-terminal domain
72c2p6uA_
not modelled 93.0 17
PDB header:dna binding protein
Chain: A: PDB Molecule:afuhel308 helicase;
PDBTitle: apo structure of the hel308 superfamily 2 helicase
73c6flqF_
not modelled 92.4 19
PDB header:transcription
Chain: F: PDB Molecule:transcription termination/antitermination protein nusa;
PDBTitle: cryoem structure of e.coli rna polymerase paused elongation complex2 bound to nusa
74d1szpb1
not modelled 91.4 19
Fold:SAM domain-like
Superfamily:Rad51 N-terminal domain-like
Family:DNA repair protein Rad51, N-terminal domain
75c6h5hA_
not modelled 91.1 15
PDB header:unknown function
Chain: A: PDB Molecule:polb4;
PDBTitle: a computationally designed drp lyase domain reconstructed from two2 heterologous fragments
76c1rrqA_
not modelled 90.7 27
PDB header:hydrolase/dna
Chain: A: PDB Molecule:muty;
PDBTitle: muty adenine glycosylase in complex with dna containing an2 a:oxog pair
77c2kp7A_
not modelled 90.7 10
PDB header:hydrolase
Chain: A: PDB Molecule:crossover junction endonuclease mus81;
PDBTitle: solution nmr structure of the mus81 n-terminal hhh.2 northeast structural genomics consortium target mmt1a
78c1vddC_
not modelled 90.2 38
PDB header:recombination
Chain: C: PDB Molecule:recombination protein recr;
PDBTitle: crystal structure of recombinational repair protein recr
79d2bcqa1
not modelled 90.0 24
Fold:SAM domain-like
Superfamily:DNA polymerase beta, N-terminal domain-like
Family:DNA polymerase beta, N-terminal domain-like
80c5zvqA_
not modelled 89.9 43
PDB header:recombination
Chain: A: PDB Molecule:recombination protein recr;
PDBTitle: crystal structure of recombination mediator protein recr
81d1vdda_
not modelled 89.9 38
Fold:Recombination protein RecR
Superfamily:Recombination protein RecR
Family:Recombination protein RecR
82c5z2vB_
not modelled 89.9 33
PDB header:dna binding protein
Chain: B: PDB Molecule:recombination protein recr;
PDBTitle: crystal structure of recr from pseudomonas aeruginosa pao1
83d1mpga1
not modelled 89.6 24
Fold:DNA-glycosylase
Superfamily:DNA-glycosylase
Family:DNA repair glycosylase, 2 C-terminal domains
84d1pu6a_
not modelled 89.4 39
Fold:DNA-glycosylase
Superfamily:DNA-glycosylase
Family:3-Methyladenine DNA glycosylase III (MagIII)
85d2fmpa2
not modelled 89.3 21
Fold:SAM domain-like
Superfamily:PsbU/PolX domain-like
Family:DNA polymerase beta-like, second domain
86c4itqA_
not modelled 88.9 24
PDB header:gene regulation, structural protein/dna
Chain: A: PDB Molecule:putative uncharacterized protein sco1480;
PDBTitle: crystal structure of hypothetical protein sco1480 bound to dna
87d1dk2a_
not modelled 88.9 12
Fold:SAM domain-like
Superfamily:DNA polymerase beta, N-terminal domain-like
Family:DNA polymerase beta, N-terminal domain-like
88d1nzpa_
not modelled 88.7 24
Fold:SAM domain-like
Superfamily:DNA polymerase beta, N-terminal domain-like
Family:DNA polymerase beta, N-terminal domain-like
89c4unfA_
not modelled 88.6 18
PDB header:lyase
Chain: A: PDB Molecule:endonuclease iii-1;
PDBTitle: crystal structure of deinococcus radiodurans endonuclease iii-1
90c3c1zA_
not modelled 88.6 33
PDB header:dna binding protein
Chain: A: PDB Molecule:dna integrity scanning protein disa;
PDBTitle: structure of the ligand-free form of a bacterial dna damage sensor2 protein
91d1kg2a_
not modelled 88.4 48
Fold:DNA-glycosylase
Superfamily:DNA-glycosylase
Family:Mismatch glycosylase
92d2vana1
not modelled 88.3 22
Fold:SAM domain-like
Superfamily:PsbU/PolX domain-like
Family:DNA polymerase beta-like, second domain
93c1mpgB_
not modelled 88.1 25
PDB header:hydrolase
Chain: B: PDB Molecule:3-methyladenine dna glycosylase ii;
PDBTitle: 3-methyladenine dna glycosylase ii from escherichia coli
94d1keaa_
not modelled 88.0 32
Fold:DNA-glycosylase
Superfamily:DNA-glycosylase
Family:Mismatch glycosylase
95d1rrqa1
not modelled 87.3 26
Fold:DNA-glycosylase
Superfamily:DNA-glycosylase
Family:Mismatch glycosylase
96d1wg8a1
not modelled 87.2 37
Fold:SAM domain-like
Superfamily:Putative methyltransferase TM0872, insert domain
Family:Putative methyltransferase TM0872, insert domain
97d1jmsa3
not modelled 86.8 19
Fold:SAM domain-like
Superfamily:PsbU/PolX domain-like
Family:DNA polymerase beta-like, second domain
98c4p6vA_
not modelled 86.7 31
PDB header:oxidoreductase
Chain: A: PDB Molecule:na(+)-translocating nadh-quinone reductase subunit a;
PDBTitle: crystal structure of the na+-translocating nadh: ubiquinone2 oxidoreductase from vibrio cholerae
99d2abka_
not modelled 86.7 36
Fold:DNA-glycosylase
Superfamily:DNA-glycosylase
Family:Endonuclease III
100c1wg8B_
not modelled 85.6 37
PDB header:transferase
Chain: B: PDB Molecule:predicted s-adenosylmethionine-dependent
PDBTitle: crystal structure of a predicted s-adenosylmethionine-2 dependent methyltransferase tt1512 from thermus3 thermophilus hb8.
101d1d8ba_
not modelled 85.6 4
Fold:SAM domain-like
Superfamily:HRDC-like
Family:HRDC domain from helicases
102d2bcqa2
not modelled 85.0 25
Fold:SAM domain-like
Superfamily:PsbU/PolX domain-like
Family:DNA polymerase beta-like, second domain
103c3tkaA_
not modelled 84.9 32
PDB header:transferase
Chain: A: PDB Molecule:ribosomal rna small subunit methyltransferase h;
PDBTitle: crystal structure and solution saxs of methyltransferase rsmh from2 e.coli
104c3n5nX_
not modelled 84.5 50
PDB header:hydrolase
Chain: X: PDB Molecule:a/g-specific adenine dna glycosylase;
PDBTitle: crystal structure analysis of the catalytic domain and interdomain2 connector of human muty homologue
105c4uobA_
not modelled 84.3 38
PDB header:lyase
Chain: A: PDB Molecule:endonuclease iii-3;
PDBTitle: crystal structure of deinococcus radiodurans endonuclease iii-3
106d1orna_
not modelled 83.4 36
Fold:DNA-glycosylase
Superfamily:DNA-glycosylase
Family:Endonuclease III
107d1a77a1
not modelled 82.8 38
Fold:SAM domain-like
Superfamily:5' to 3' exonuclease, C-terminal subdomain
Family:5' to 3' exonuclease, C-terminal subdomain
108c2va8A_
not modelled 82.1 23
PDB header:hydrolase
Chain: A: PDB Molecule:ski2-type helicase;
PDBTitle: dna repair helicase hel308
109c3zddA_
not modelled 81.6 23
PDB header:hydrolase/dna
Chain: A: PDB Molecule:protein xni;
PDBTitle: structure of e. coli exoix in complex with the palindromic 5ov62 oligonucleotide and potassium
110c5lm7A_
not modelled 81.5 21
PDB header:transcription
Chain: A: PDB Molecule:transcription termination/antitermination protein nusa;
PDBTitle: crystal structure of the lambda n-nus factor complex
111c4b24A_
not modelled 80.5 20
PDB header:hydrolase/dna
Chain: A: PDB Molecule:probable dna-3-methyladenine glycosylase 2;
PDBTitle: unprecedented sculpting of dna at abasic sites by dna glycoslase2 homolog mag2
112c1ut8B_
not modelled 80.4 24
PDB header:hydrolase
Chain: B: PDB Molecule:exodeoxyribonuclease;
PDBTitle: divalent metal ions (zinc) bound to t5 5'-exonuclease
113d1rxwa1
not modelled 80.3 13
Fold:SAM domain-like
Superfamily:5' to 3' exonuclease, C-terminal subdomain
Family:5' to 3' exonuclease, C-terminal subdomain
114c2jhnB_
not modelled 79.7 23
PDB header:hydrolase
Chain: B: PDB Molecule:3-methyladenine dna-glycosylase;
PDBTitle: 3-methyladenine dna-glycosylase from archaeoglobus fulgidus
115c2ziuA_
not modelled 78.2 21
PDB header:hydrolase
Chain: A: PDB Molecule:mus81 protein;
PDBTitle: crystal structure of the mus81-eme1 complex
116c3f10A_
not modelled 77.4 33
PDB header:hydrolase, lyase
Chain: A: PDB Molecule:8-oxoguanine-dna-glycosylase;
PDBTitle: crystal structure of clostridium acetobutylicum 8-oxoguanine dna2 glycosylase in complex with 8-oxoguanosine
117c5e27B_
not modelled 76.6 30
PDB header:cell adhesion
Chain: B: PDB Molecule:resuscitation-promoting factor rpfb;
PDBTitle: the structure of resuscitation promoting factor b from m. tuberculosis2 reveals unexpected ubiquitin-like domains
118c1rxvA_
not modelled 76.5 13
PDB header:hydrolase/dna
Chain: A: PDB Molecule:flap structure-specific endonuclease;
PDBTitle: crystal structure of a. fulgidus fen-1 bound to dna
119c6c34A_
not modelled 75.8 33
PDB header:dna binding protein
Chain: A: PDB Molecule:5'-3' exonuclease;
PDBTitle: mycobacterium smegmatis dna flap endonuclease mutant d125n
120d1ul1x1
not modelled 75.7 25
Fold:SAM domain-like
Superfamily:5' to 3' exonuclease, C-terminal subdomain
Family:5' to 3' exonuclease, C-terminal subdomain

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below