Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2422_(-)_2719093_2719365
DateWed Aug 7 12:50:04 BST 2019
Unique Job IDcafc8af67382a4e4
SequenceMPASVSTVLV ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:17.364 Y:30.771 Z:20.143
Model (left) based on template c5wzfB_
Top template information
PDB header:hydrolase
Chain: B: PDB Molecule:23s rrna-specific endonuclease vapc20;
PDBTitle: crystal structure of mycobacterium tuberculosis vapc20 (rv2549c),2 sarcin-ricin loop cleaving toxin
Confidence and coverage
Confidence: 43.1% Coverage: 31%
28 residues ( 31% of your sequence) have been modelled with 43.1% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
Please note: You must be registered and logged in to use Phyrealarm.
3D viewing
Interactive 3D view in JSmol
For other options to view your downloaded structure offline see the FAQ

Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c5wzfB_



43.1 25
PDB header:hydrolase
Chain: B: PDB Molecule:23s rrna-specific endonuclease vapc20;
PDBTitle: crystal structure of mycobacterium tuberculosis vapc20 (rv2549c),2 sarcin-ricin loop cleaving toxin
2d1w8ia_



17.7 24
Fold:PIN domain-like
Superfamily:PIN domain-like
Family:PIN domain
3c5uvdA_



17.4 28
PDB header:transferase
Chain: A: PDB Molecule:nucleotidyltransferase-like protein;
PDBTitle: crystal structure of an antigenic nucleotidyltransferase-like protein2 from paracoccidioides brasiliensis
4c5x3tD_



9.3 24
PDB header:antitoxin/toxin
Chain: D: PDB Molecule:ribonuclease vapc26;
PDBTitle: vapbc from mycobacterium tuberculosis
5d1ejxc2



9.2 58
Fold:TIM beta/alpha-barrel
Superfamily:Metallo-dependent hydrolases
Family:alpha-subunit of urease, catalytic domain
6d1e9yb2



9.1 58
Fold:TIM beta/alpha-barrel
Superfamily:Metallo-dependent hydrolases
Family:alpha-subunit of urease, catalytic domain
7d1m6ya1



8.3 83
Fold:SAM domain-like
Superfamily:Putative methyltransferase TM0872, insert domain
Family:Putative methyltransferase TM0872, insert domain
8c6f74B_



8.3 47
PDB header:flavoprotein
Chain: B: PDB Molecule:alcohol oxidase;
PDBTitle: crystal structure of vao-type flavoprotein mtvao713 from2 myceliophthora thermophila c1
9d1wg8a1



8.3 100
Fold:SAM domain-like
Superfamily:Putative methyltransferase TM0872, insert domain
Family:Putative methyltransferase TM0872, insert domain
10c6culG_



6.2 42
PDB header:transferase
Chain: G: PDB Molecule:pyoverdine synthetase f;
PDBTitle: pvdf of pyoverdin biosynthesis is a structurally unique n10-2 formyltetrahydrofolate-dependent formyltransferase

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite