Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2432c_(-)_2728447_2728857
DateWed Aug 7 12:50:05 BST 2019
Unique Job IDff9200d50780e67c
SequenceMTVRAEHCRG ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:9.057 Y:17.504 Z:8.248
Model (left) based on template c2ktcA_
Top template information
PDB header:toxin
Chain: A: PDB Molecule:potassium channel toxin alpha-ktx 9.4;
PDBTitle: solution structure of a novel hkv1.1 inhibiting scorpion toxin from2 mesibuthus tamulus
Confidence and coverage
Confidence: 21.8% Coverage: 7%
9 residues ( 7% of your sequence) have been modelled with 21.8% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
Please note: You must be registered and logged in to use Phyrealarm.
3D viewing
Interactive 3D view in JSmol
For other options to view your downloaded structure offline see the FAQ

Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c2ktcA_



21.8 67
PDB header:toxin
Chain: A: PDB Molecule:potassium channel toxin alpha-ktx 9.4;
PDBTitle: solution structure of a novel hkv1.1 inhibiting scorpion toxin from2 mesibuthus tamulus
2d1dnla_



19.2 25
Fold:Split barrel-like
Superfamily:FMN-binding split barrel
Family:PNP-oxidase like
3c3h6qA_



16.8 28
PDB header:hydrolase/hydrolase inhibitor
Chain: A: PDB Molecule:macrocypin 1a;
PDBTitle: macrocypin, a beta-trefoil cysteine protease inhibitor
4d2rh2a1



16.0 75
Fold:SH3-like barrel
Superfamily:Electron transport accessory proteins
Family:R67 dihydrofolate reductase
5d2avue1



15.2 24
Fold:FlhC-like
Superfamily:FlhC-like
Family:FlhC-like
6c1wm8A_



13.8 83
PDB header:toxin
Chain: A: PDB Molecule:neurotoxin bmp03;
PDBTitle: solution structure of bmp03 from the venom of scorpion buthus2 martensii karsch, 10 structures
7c2avuF_



13.3 24
PDB header:transcription activator
Chain: F: PDB Molecule:flagellar transcriptional activator flhc;
PDBTitle: structure of the escherichia coli flhdc complex, a2 prokaryotic heteromeric regulator of transcription
8c1du9A_



13.1 83
PDB header:toxin
Chain: A: PDB Molecule:bmp02 neurotoxin;
PDBTitle: solution structure of bmp02, a natural scorpion toxin which2 blocks apamin-sensitive calcium-activated potassium3 channels, 25 structures
9c3bbnM_



10.3 64
PDB header:ribosome
Chain: M: PDB Molecule:ribosomal protein s13;
PDBTitle: homology model for the spinach chloroplast 30s subunit fitted to 9.4a2 cryo-em map of the 70s chlororibosome.
10d1emoa2



9.1 75
Fold:Knottins (small inhibitors, toxins, lectins)
Superfamily:EGF/Laminin
Family:EGF-type module
11c5ja9D_



8.5 22
PDB header:toxin
Chain: D: PDB Molecule:toxin higb-2;
PDBTitle: crystal structure of the higb2 toxin in complex with nb6
12c6gv7A_



8.5 45
PDB header:metal binding protein
Chain: A: PDB Molecule:metallothionein;
PDBTitle: cadmium(ii) form of a44h mutant of shortened metallothionein from2 pseudomonas fluorescens q2-87 (residues 1-52)
13c5buzC_



7.1 36
PDB header:transport protein
Chain: C: PDB Molecule:snap receptor-like protein;
PDBTitle: crystal structure of a complex between the snare vam3 and the hops2 vps33-vps16 subcomplex from chaetomium thermophilum
14d3ebxa_



6.5 67
Fold:Snake toxin-like
Superfamily:Snake toxin-like
Family:Snake venom toxins
15c5mxnA_



6.3 38
PDB header:transport protein
Chain: A: PDB Molecule:type vi secretion protein;
PDBTitle: atomic model of the vipa/vipb/hcp, the type six secretion system non-2 contractile sheath-tube of vibrio cholerae from cryo-em
16d1qm4a2



5.9 44
Fold:S-adenosylmethionine synthetase
Superfamily:S-adenosylmethionine synthetase
Family:S-adenosylmethionine synthetase
17c5o5jM_



5.7 57
PDB header:ribosome
Chain: M: PDB Molecule:30s ribosomal protein s13;
PDBTitle: structure of the 30s small ribosomal subunit from mycobacterium2 smegmatis
18d1im3d_



5.7 43
Fold:Immunoglobulin-like beta-sandwich
Superfamily:E set domains
Family:Cytomegalovirus protein US2
19d2gy9m1



5.7 57
Fold:S13-like H2TH domain
Superfamily:S13-like H2TH domain
Family:Ribosomal protein S13
20d2p02a2



5.7 44
Fold:S-adenosylmethionine synthetase
Superfamily:S-adenosylmethionine synthetase
Family:S-adenosylmethionine synthetase
21c5mmjm_



not modelled 5.6 57
PDB header:ribosome
Chain: M: PDB Molecule:
PDBTitle: structure of the small subunit of the chloroplast ribosome
22d2o2aa1



not modelled 5.6 50
Fold:SecB-like
Superfamily:SecB-like
Family:SP1558-like
23d1v9ca_



not modelled 5.6 46
Fold:Flavodoxin-like
Superfamily:Precorrin-8X methylmutase CbiC/CobH
Family:Precorrin-8X methylmutase CbiC/CobH
24d2hnga1



not modelled 5.4 50
Fold:SecB-like
Superfamily:SecB-like
Family:SP1558-like
25d1mxaa2



not modelled 5.4 33
Fold:S-adenosylmethionine synthetase
Superfamily:S-adenosylmethionine synthetase
Family:S-adenosylmethionine synthetase
26c5l2dD_



not modelled 5.2 50
PDB header:cell adhesion
Chain: D: PDB Molecule:surface-associated protein csha;
PDBTitle: streptococcal surface adhesin - csha nr2
27c5l2dC_



not modelled 5.2 50
PDB header:cell adhesion
Chain: C: PDB Molecule:surface-associated protein csha;
PDBTitle: streptococcal surface adhesin - csha nr2
28d2uubm1



not modelled 5.2 57
Fold:S13-like H2TH domain
Superfamily:S13-like H2TH domain
Family:Ribosomal protein S13
29c3j9oJ_



not modelled 5.1 38
PDB header:structural protein
Chain: J: PDB Molecule:intracellular growth locus protein b;
PDBTitle: cryoem structure of a type vi secretion system
30d1dcsa_



not modelled 5.1 32
Fold:Double-stranded beta-helix
Superfamily:Clavaminate synthase-like
Family:Penicillin synthase-like
31c3j6vG_



not modelled 5.1 80
PDB header:ribosome
Chain: G: PDB Molecule:28s ribosomal protein s7, mitochondrial;
PDBTitle: cryo-em structure of the small subunit of the mammalian mitochondrial2 ribosome

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite