1 c5o60S_ 
 
100.0 
88 
PDB header: ribosomeChain:  S: PDB Molecule: 50s ribosomal protein l21;PDBTitle:  structure of the 50s large ribosomal subunit from mycobacterium2 smegmatis
2 c5mmiS_ 
 
100.0 
29 
PDB header: ribosomeChain:  S: PDB Molecule: 50s ribosomal protein l21, chloroplastic;PDBTitle:  structure of the large subunit of the chloroplast ribosome
3 c3j3vR_ 
 
100.0 
40 
PDB header: ribosomeChain:  R: PDB Molecule: 50s ribosomal protein l21;PDBTitle:  atomic model of the immature 50s subunit from bacillus subtilis (state2 i-a)
4 c5mlcT_ 
 
100.0 
29 
PDB header: ribosomeChain:  T: PDB Molecule: 50s ribosomal protein l21, chloroplastic;PDBTitle:  cryo-em structure of the spinach chloroplast ribosome reveals the2 location of plastid-specific ribosomal proteins and extensions
5 d2qamr1 
 
100.0 
36 
Fold: L21p-likeSuperfamily: L21p-likeFamily: Ribosomal protein L21p
6 c4v19V_ 
 
100.0 
27 
PDB header: ribosomeChain:  V: PDB Molecule: mitoribosomal protein bl21m, mrpl21;PDBTitle:  structure of the large subunit of the mammalian mitoribosome, part 12 of 2
7 c1vw4N_ 
 
100.0 
20 
PDB header: ribosomeChain:  N: PDB Molecule: 54s ribosomal protein l49, mitochondrial;PDBTitle:  structure of the yeast mitochondrial large ribosomal subunit
8 c4ce4V_ 
 
100.0 
27 
PDB header: ribosomeChain:  V: PDB Molecule: mrpl21;PDBTitle:  39s large subunit of the porcine mitochondrial ribosome
9 c3bboT_ 
 
100.0 
30 
PDB header: ribosomeChain:  T: PDB Molecule: ribosomal protein l21;PDBTitle:  homology model for the spinach chloroplast 50s subunit fitted to 9.4a2 cryo-em map of the 70s chlororibosome
10 d2j01v1 
 
100.0 
46 
Fold: L21p-likeSuperfamily: L21p-likeFamily: Ribosomal protein L21p
11 d2zjro1 
 
100.0 
46 
Fold: L21p-likeSuperfamily: L21p-likeFamily: Ribosomal protein L21p
12 c5oo9A_ 
 
64.7 
10 
PDB header: biosynthetic proteinChain:  A: PDB Molecule: putative cupin_2 domain-containing isomerase;PDBTitle:  streptomyces pac13 (y55f) with uridine
13 c2gu9B_ 
 
54.1 
14 
PDB header: immune systemChain:  B: PDB Molecule: tetracenomycin polyketide synthesis protein;PDBTitle:  crystal structure of xc5357 from xanthomonas campestris: a2 putative tetracenomycin polyketide synthesis protein3 adopting a novel cupin subfamily structure
14 c3ossC_ 
 
50.0 
24 
PDB header: protein transportChain:  C: PDB Molecule: type 2 secretion system, gspc;PDBTitle:  the crystal structure of enterotoxigenic escherichia coli gspc-gspd2 complex from the type ii secretion system
15 c6nwoD_ 
 
48.2 
29 
PDB header: transcriptionChain:  D: PDB Molecule: transcriptional regulator bgar;PDBTitle:  structures of the transcriptional regulator bgar, a lactose sensor.
16 c3ibmB_ 
 
46.9 
19 
PDB header: structural genomics, unknown functionChain:  B: PDB Molecule: cupin 2, conserved barrel domain protein;PDBTitle:  crystal structure of cupin 2 domain-containing protein hhal_0468 from2 halorhodospira halophila
17 c5j4fB_ 
 
46.8 
14 
PDB header: unknown functionChain:  B: PDB Molecule: uncharacterized protein;PDBTitle:  crystal structure of the n-terminally his6-tagged hp0902, an2 uncharacterized protein from helicobacter pylori 26695
18 c2ivwA_ 
 
46.7 
24 
PDB header: lipoproteinChain:  A: PDB Molecule: pilp pilot protein;PDBTitle:  the solution structure of a domain from the neisseria meningitidis2 pilp pilot protein.
19 d2arca_ 
 
45.8 
24 
Fold: Double-stranded beta-helixSuperfamily: Regulatory protein AraCFamily: Regulatory protein AraC
20 c4h7lB_ 
 
44.4 
14 
PDB header: structural genomics, unknown functionChain:  B: PDB Molecule: uncharacterized protein;PDBTitle:  crystal structure of plim_4148 protein from planctomyces limnophilus
21 c2lc4A_ 
 
not modelled 
43.4 
23 
PDB header: structural proteinChain:  A: PDB Molecule: pilp protein;PDBTitle:  solution structure of pilp from pseudomonas aeruginosa
22 d1jala2 
 
not modelled 
40.9 
39 
Fold: beta-Grasp (ubiquitin-like)Superfamily: TGS-likeFamily: G domain-linked domain
23 c5tg0A_ 
 
not modelled 
40.9 
33 
PDB header: lyaseChain:  A: PDB Molecule: dimethylsulfoniopropionate lyase dddk;PDBTitle:  crystal structure of the dimethylsulfoniopropionate (dmsp) lyase dddk2 complexed with iron and zinc
24 c3kgzA_ 
 
not modelled 
40.2 
29 
PDB header: structural genomics, unknown functionChain:  A: PDB Molecule: cupin 2 conserved barrel domain protein;PDBTitle:  crystal structure of a cupin 2 conserved barrel domain protein from2 rhodopseudomonas palustris
25 c4av2P_ 
 
not modelled 
39.2 
24 
PDB header: protein transportChain:  P: PDB Molecule: pilp protein;PDBTitle:  single particle electron microscopy of pilq dodecameric complexes from2 neisseria meningitidis.
26 c3d82A_ 
 
not modelled 
38.7 
9 
PDB header: metal binding proteinChain:  A: PDB Molecule: cupin 2, conserved barrel domain protein;PDBTitle:  crystal structure of a cupin-2 domain containing protein (sfri_3543)2 from shewanella frigidimarina ncimb 400 at 2.05 a resolution
27 d1sq4a_ 
 
not modelled 
37.5 
19 
Fold: Double-stranded beta-helixSuperfamily: RmlC-like cupinsFamily: YlbA-like
28 d1sfna_ 
 
not modelled 
36.2 
24 
Fold: Double-stranded beta-helixSuperfamily: RmlC-like cupinsFamily: YlbA-like
29 c2vpvA_ 
 
not modelled 
35.7 
10 
PDB header: cell cycleChain:  A: PDB Molecule: protein mif2;PDBTitle:  dimerization domain of mif2p
30 c1sefA_ 
 
not modelled 
35.6 
19 
PDB header: structural genomics, unknown functionChain:  A: PDB Molecule: conserved hypothetical protein;PDBTitle:  crystal structure of cupin domain protein ef2996 from enterococcus2 faecalis
31 d1sefa_ 
 
not modelled 
35.6 
19 
Fold: Double-stranded beta-helixSuperfamily: RmlC-like cupinsFamily: YlbA-like
32 d1y9qa2 
 
not modelled 
34.3 
10 
Fold: Double-stranded beta-helixSuperfamily: RmlC-like cupinsFamily: Probable transcriptional regulator VC1968, C-terminal domain
33 d1vj2a_ 
 
not modelled 
34.2 
24 
Fold: Double-stranded beta-helixSuperfamily: RmlC-like cupinsFamily: TM1459-like
34 c5u9eB_ 
 
not modelled 
33.5 
14 
PDB header: transcriptionChain:  B: PDB Molecule: hth-type transcriptional activator rhar;PDBTitle:  structure of the regulatory domain of the arac family transcriptional2 activator rhar
35 d1rc6a_ 
 
not modelled 
32.9 
14 
Fold: Double-stranded beta-helixSuperfamily: RmlC-like cupinsFamily: YlbA-like
36 c5uqpA_ 
 
not modelled 
32.6 
29 
PDB header: unknown functionChain:  A: PDB Molecule: cupin;PDBTitle:  the crystal structure of cupin protein from rhodococcus jostii rha1
37 c3cewA_ 
 
not modelled 
32.5 
14 
PDB header: structural genomics, unknown functionChain:  A: PDB Molecule: uncharacterized cupin protein;PDBTitle:  crystal structure of a cupin protein (bf4112) from bacteroides2 fragilis. northeast structural genomics consortium target bfr205
38 c4e2gE_ 
 
not modelled 
32.5 
10 
PDB header: structural genomics, unknown functionChain:  E: PDB Molecule: cupin 2 conserved barrel domain protein;PDBTitle:  crystal structure of cupin fold protein sthe2323 from sphaerobacter2 thermophilus
39 c2lnvA_ 
 
not modelled 
30.4 
25 
PDB header: transport proteinChain:  A: PDB Molecule: general secretion pathway protein c;PDBTitle:  solution structure of gspc-hr of typeii secretion system
40 c3lwcA_ 
 
not modelled 
28.8 
27 
PDB header: structural genomics, unknown functionChain:  A: PDB Molecule: uncharacterized protein;PDBTitle:  crystal structure of structural genomics, unknown function2 (yp_766765.1) from rhizobium leguminosarum bv. viciae 3841 at 1.40 a3 resolution
41 c3l2hD_ 
 
not modelled 
28.6 
29 
PDB header: isomeraseChain:  D: PDB Molecule: putative sugar phosphate isomerase;PDBTitle:  crystal structure of putative sugar phosphate isomerase (afe_0303)2 from acidithiobacillus ferrooxidans atcc 23270 at 1.85 a resolution
42 c2ozjB_ 
 
not modelled 
27.2 
19 
PDB header: unknown functionChain:  B: PDB Molecule: cupin 2, conserved barrel;PDBTitle:  crystal structure of a cupin superfamily protein (dsy2733) from2 desulfitobacterium hafniense dcb-2 at 1.60 a resolution
43 c3h7yA_ 
 
not modelled 
27.1 
14 
PDB header: biosynthetic proteinChain:  A: PDB Molecule: bacilysin biosynthesis protein bacb;PDBTitle:  crystal structure of bacb, an enzyme involved in bacilysin synthesis,2 in tetragonal form
44 c3fjsC_ 
 
not modelled 
26.0 
19 
PDB header: biosynthetic proteinChain:  C: PDB Molecule: uncharacterized protein with rmlc-like cupin fold;PDBTitle:  crystal structure of a putative biosynthetic protein with rmlc-like2 cupin fold (reut_b4087) from ralstonia eutropha jmp134 at 1.90 a3 resolution
45 d1yhfa1 
 
not modelled 
25.2 
24 
Fold: Double-stranded beta-helixSuperfamily: RmlC-like cupinsFamily: TM1287-like
46 c5fq0A_ 
 
not modelled 
25.2 
19 
PDB header: lyaseChain:  A: PDB Molecule: kdgf;PDBTitle:  the structure of kdgf from halomonas sp.
47 c3jzvA_ 
 
not modelled 
24.1 
24 
PDB header: structural genomics, unknown functionChain:  A: PDB Molecule: uncharacterized protein rru_a2000;PDBTitle:  crystal structure of rru_a2000 from rhodospirillum rubrum: a cupin-22 domain.
48 c4rd7A_ 
 
not modelled 
24.0 
29 
PDB header: unknown functionChain:  A: PDB Molecule: cupin 2 conserved barrel domain protein;PDBTitle:  the crystal structure of a cupin 2 conserved barrel domain protein2 from salinispora arenicola cns-205
49 c4axoA_ 
 
not modelled 
23.1 
14 
PDB header: structural proteinChain:  A: PDB Molecule: ethanolamine utilization protein;PDBTitle:  structure of the clostridium difficile eutq protein
50 c4e2sE_ 
 
not modelled 
21.3 
33 
PDB header: hydrolaseChain:  E: PDB Molecule: ureidoglycine aminohydrolase;PDBTitle:  crystal structure of (s)-ureidoglycine aminohydrolase from arabidopsis2 thaliana in complex with its substrate, (s)-ureidoglycine
51 c2pfwB_ 
 
not modelled 
21.2 
24 
PDB header: unknown functionChain:  B: PDB Molecule: cupin 2, conserved barrel domain protein;PDBTitle:  crystal structure of a rmlc-like cupin (sfri_3105) from shewanella2 frigidimarina ncimb 400 at 1.90 a resolution
52 c5j7mB_ 
 
not modelled 
21.0 
24 
PDB header: unknown functionChain:  B: PDB Molecule: cupin 2 conserved barrel domain protein;PDBTitle:  crystal structure of cupin 2 conserved barrel domain protein from2 kribbella flavida dsm 17836
53 d1o4ta_ 
 
not modelled 
19.6 
18 
Fold: Double-stranded beta-helixSuperfamily: RmlC-like cupinsFamily: TM1287-like
54 c5ccbB_ 
 
not modelled 
18.6 
21 
PDB header: transferase/rnaChain:  B: PDB Molecule: trna (adenine(58)-n(1))-methyltransferase non-catalyticPDBTitle:  crystal structure of human m1a58 methyltransferase in a complex with2 trna3lys and sah
55 c2ejgD_ 
 
not modelled 
18.3 
12 
PDB header: ligaseChain:  D: PDB Molecule: 149aa long hypothetical methylmalonyl-coa decarboxylasePDBTitle:  crystal structure of the biotin protein ligase (mutation r48a) and2 biotin carboxyl carrier protein complex from pyrococcus horikoshii3 ot3
56 c5zbfA_ 
 
not modelled 
18.3 
11 
PDB header: isomeraseChain:  A: PDB Molecule: cupin domain protein;PDBTitle:  crystal structure of 4-hydroxyphenylpyruvic acid bound aere from2 microcystis aeruginosa
57 d1v70a_ 
 
not modelled 
18.0 
19 
Fold: Double-stranded beta-helixSuperfamily: RmlC-like cupinsFamily: TM1287-like
58 c3i7dB_ 
 
not modelled 
17.7 
10 
PDB header: isomeraseChain:  B: PDB Molecule: sugar phosphate isomerase;PDBTitle:  crystal structure of sugar phosphate isomerase from a cupin2 superfamily spo2919 from silicibacter pomeroyi (yp_168127.1) from3 silicibacter pomeroyi dss-3 at 2.30 a resolution
59 c4i4aA_ 
 
not modelled 
16.7 
24 
PDB header: structural genomics, unknown functionChain:  A: PDB Molecule: similar to unknown protein;PDBTitle:  crystal structure of plu4264 protein from photorhabdus luminescens
60 d2pyta1 
 
not modelled 
15.9 
27 
Fold: Double-stranded beta-helixSuperfamily: RmlC-like cupinsFamily: EutQ-like
61 d2f4pa1 
 
not modelled 
15.8 
24 
Fold: Double-stranded beta-helixSuperfamily: RmlC-like cupinsFamily: TM1287-like
62 c5k2lA_ 
 
not modelled 
15.6 
33 
PDB header: hydrolaseChain:  A: PDB Molecule: chitinase, lysozyme;PDBTitle:  crystal structure of lysm domain from volvox carteri chitinase
63 c6b8wB_ 
 
not modelled 
15.4 
11 
PDB header: transcriptionChain:  B: PDB Molecule: xre family transcriptional regulator;PDBTitle:  1.9 angstrom resolution crystal structure of cupin_2 domain (pfam2 07883) of xre family transcriptional regulator from enterobacter3 cloacae.
64 c4npgA_ 
 
not modelled 
14.4 
28 
PDB header: structural genomics, unknown functionChain:  A: PDB Molecule: putative lipoprotein;PDBTitle:  crystal structure of a hypothetical protein (bt1938) from bacteroides2 thetaiotaomicron vpi-5482 at 2.50 a resolution
65 d1uwwa_ 
 
not modelled 
14.2 
13 
Fold: Galactose-binding domain-likeSuperfamily: Galactose-binding domain-likeFamily: Family 28 carbohydrate binding module, CBM28
66 c2go51_ 
 
not modelled 
13.2 
33 
PDB header: translation/rnaChain:  1: PDB Molecule: signal recognition particle receptor alphaPDBTitle:  structure of signal recognition particle receptor (sr) in2 complex with signal recognition particle (srp) and3 ribosome nascent chain complex
67 d2fh5a1 
 
not modelled 
13.0 
33 
Fold: Profilin-likeSuperfamily: SNARE-likeFamily: SRP alpha N-terminal domain-like
68 c2q30C_ 
 
not modelled 
12.4 
20 
PDB header: unknown functionChain:  C: PDB Molecule: uncharacterized protein;PDBTitle:  crystal structure of a rmlc-like cupin protein (dde_2303) from2 desulfovibrio desulfuricans subsp. at 1.94 a resolution
69 d1o5ua_ 
 
not modelled 
12.0 
41 
Fold: Double-stranded beta-helixSuperfamily: RmlC-like cupinsFamily: Hypothetical protein TM1112
70 c5nlaA_ 
 
not modelled 
11.2 
5 
PDB header: transcriptionChain:  A: PDB Molecule: putative transcriptional regulator transcription regulatorPDBTitle:  crystal structure of the arac-like transcriptional activator cuxr
71 c3rnsA_ 
 
not modelled 
10.6 
19 
PDB header: structural genomics, unknown functionChain:  A: PDB Molecule: cupin 2 conserved barrel domain protein;PDBTitle:  cupin 2 conserved barrel domain protein from leptotrichia buccalis
72 c2i45C_ 
 
not modelled 
10.4 
23 
PDB header: structural genomics, unknown functionChain:  C: PDB Molecule: hypothetical protein;PDBTitle:  crystal structure of protein nmb1881 from neisseria meningitidis
73 c5bxxA_ 
 
not modelled 
10.3 
8 
PDB header: lyaseChain:  A: PDB Molecule: l-ectoine synthase;PDBTitle:  crystal structure of the ectoine synthase from the cold-adapted marine2 bacterium sphingopyxis alaskensis
74 d1u0la1 
 
not modelled 
9.4 
18 
Fold: OB-foldSuperfamily: Nucleic acid-binding proteinsFamily: Cold shock DNA-binding domain-like
75 c5onoA_ 
 
not modelled 
9.2 
22 
PDB header: metal binding proteinChain:  A: PDB Molecule: l-ectoine synthase;PDBTitle:  crystal structure of ectoine synthase from p. lautus
76 c4la3B_ 
 
not modelled 
9.1 
19 
PDB header: lyaseChain:  B: PDB Molecule: dimethylsulphoniopropionate (dmsp) lyase dddq;PDBTitle:  crystal structure of dimethylsulphoniopropionate (dmsp) lyase dddq2 y131a in complex with dmsp
77 c3i0mA_ 
 
not modelled 
8.2 
17 
PDB header: cell cycleChain:  A: PDB Molecule: dna repair and telomere maintenance protein nbs1;PDBTitle:  structure of the s. pombe nbs1 fha/brct-repeat domain
78 c2wkdA_ 
 
not modelled 
7.9 
19 
PDB header: dna binding proteinChain:  A: PDB Molecule: orf34p2;PDBTitle:  crystal structure of a double ile-to-met mutant of protein orf34 from2 lactococcus phage p2
79 c3m9bK_ 
 
not modelled 
7.7 
14 
PDB header: chaperoneChain:  K: PDB Molecule: proteasome-associated atpase;PDBTitle:  crystal structure of the amino terminal coiled coil domain and the2 inter domain of the mycobacterium tuberculosis proteasomal atpase mpa
80 d2b8ma1 
 
not modelled 
7.7 
14 
Fold: Double-stranded beta-helixSuperfamily: RmlC-like cupinsFamily: MJ0764-like
81 c1d8lA_ 
 
not modelled 
7.6 
20 
PDB header: gene regulationChain:  A: PDB Molecule: protein (holliday junction dna helicase ruva);PDBTitle:  e. coli holliday junction binding protein ruva nh2 region lacking2 domain iii
82 c2o8qA_ 
 
not modelled 
7.4 
5 
PDB header: metal binding proteinChain:  A: PDB Molecule: hypothetical protein;PDBTitle:  crystal structure of a protein with a cupin-like fold and unknown2 function (bxe_c0505) from burkholderia xenovorans lb400 at 1.55 a3 resolution
83 d1tifa_ 
 
not modelled 
7.3 
11 
Fold: beta-Grasp (ubiquitin-like)Superfamily: Translation initiation factor IF3, N-terminal domainFamily: Translation initiation factor IF3, N-terminal domain
84 d2fug33 
 
not modelled 
7.0 
31 
Fold: beta-Grasp (ubiquitin-like)Superfamily: 2Fe-2S ferredoxin-likeFamily: 2Fe-2S ferredoxin domains from multidomain proteins
85 c6ckaB_ 
 
not modelled 
7.0 
50 
PDB header: viral proteinChain:  B: PDB Molecule: paratox;PDBTitle:  crystal structure of paratox
86 c3myxA_ 
 
not modelled 
7.0 
9 
PDB header: structural genomics, unknown functionChain:  A: PDB Molecule: uncharacterized protein pspto_0244;PDBTitle:  crystal structure of a pspto_0244 (protein with unknown function which2 belongs to pfam duf861 family) from pseudomonas syringae pv. tomato3 str. dc3000 at 1.30 a resolution
87 c5nrkA_ 
 
not modelled 
6.8 
27 
PDB header: protein bindingChain:  A: PDB Molecule: endoglucanase;PDBTitle:  crystal structure of the sixth cohesin from acetivibrio2 cellulolyticus' scaffoldin b in complex with cel5 dockerin s15i, i16n3 mutant
88 c3j81i_ 
 
not modelled 
6.8 
19 
PDB header: ribosomeChain:  I: PDB Molecule: es8;PDBTitle:  cryoem structure of a partial yeast 48s preinitiation complex
89 d1dgwa_ 
 
not modelled 
6.8 
38 
Fold: Double-stranded beta-helixSuperfamily: RmlC-like cupinsFamily: Germin/Seed storage 7S protein
90 c2mkxA_ 
 
not modelled 
6.8 
31 
PDB header: hydrolaseChain:  A: PDB Molecule: autolysin;PDBTitle:  solution structure of lysm the peptidoglycan binding domain of2 autolysin atla from enterococcus faecalis
91 c5fpzA_ 
 
not modelled 
6.7 
19 
PDB header: hydrolaseChain:  A: PDB Molecule: pectin degradation protein;PDBTitle:  the structure of kdgf from yersinia enterocolitica with2 malonate bound in the active site.
92 d1a7ha_ 
 
not modelled 
6.7 
16 
Fold: gamma-Crystallin-likeSuperfamily: gamma-Crystallin-likeFamily: Crystallins/Ca-binding development proteins
93 d1cuka3 
 
not modelled 
6.7 
20 
Fold: OB-foldSuperfamily: Nucleic acid-binding proteinsFamily: DNA helicase RuvA subunit, N-terminal domain
94 c3acgA_ 
 
not modelled 
6.6 
18 
PDB header: hydrolaseChain:  A: PDB Molecule: beta-1,4-endoglucanase;PDBTitle:  crystal structure of carbohydrate-binding module family 28 from2 clostridium josui cel5a in complex with cellobiose
95 c1hjpA_ 
 
not modelled 
6.4 
20 
PDB header: dna recombinationChain:  A: PDB Molecule: ruva;PDBTitle:  holliday junction binding protein ruva from e. coli
96 d1hr0w_ 
 
not modelled 
6.4 
29 
Fold: OB-foldSuperfamily: Nucleic acid-binding proteinsFamily: Cold shock DNA-binding domain-like
97 c2oqkA_ 
 
not modelled 
6.2 
31 
PDB header: translationChain:  A: PDB Molecule: putative translation initiation factor eif-1a;PDBTitle:  crystal structure of putative cryptosporidium parvum translation2 initiation factor eif-1a
98 d1jt8a_ 
 
not modelled 
6.2 
35 
Fold: OB-foldSuperfamily: Nucleic acid-binding proteinsFamily: Cold shock DNA-binding domain-like
99 d2cqaa1 
 
not modelled 
6.2 
35 
Fold: OB-foldSuperfamily: Nucleic acid-binding proteinsFamily: TIP49 domain