Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2444c_(rne)_2742133_2744994
DateWed Aug 7 12:50:07 BST 2019
Unique Job IDfa0bd31411b4d20f
SequenceVIDGAPPSDP ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:73.946 Y:69.600 Z:86.792
Model (left) based on template c2c4rL_
Top template information
PDB header:hydrolase
Chain: L: PDB Molecule:ribonuclease e;
PDBTitle: catalytic domain of e. coli rnase e
Confidence and coverage
Confidence:100.0% Coverage: 49%
466 residues ( 49% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
Warning: 53% of your sequence is predicted disordered. Disordered regions cannot be meaningfully predicted.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

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#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c2c4rL_
100.0 30
PDB header:hydrolase
Chain: L: PDB Molecule:ribonuclease e;
PDBTitle: catalytic domain of e. coli rnase e
2c4oxpA_
100.0 39
PDB header:hydrolase
Chain: A: PDB Molecule:ribonuclease e;
PDBTitle: x-ray crystal structure of the s1 and 5'-sensor domains of rnase e2 from caulobacter crescentus
3d1smxa_
99.9 44
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like
4c6qh2A_
98.4 26
PDB header:signaling protein
Chain: A: PDB Molecule:polyribonucleotide nucleotidyltransferase;
PDBTitle: solution nmr ensemble for a chimeric kh-s1 domain construct of2 exosomal polynucleotide phosphrylase at 298k compiled using the3 comand method
5c4aimA_
98.3 26
PDB header:transferase/peptide
Chain: A: PDB Molecule:polyribonucleotide nucleotidyltransferase;
PDBTitle: crystal structure of c. crescentus pnpase bound to rnase e2 recognition peptide
6d2ba0a1
98.2 25
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like
7c2z0sA_
98.2 25
PDB header:rna binding protein
Chain: A: PDB Molecule:probable exosome complex rna-binding protein 1;
PDBTitle: crystal structure of putative exosome complex rna-binding2 protein
8d2z0sa1
98.2 28
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like
9c2cqoA_
98.2 18
PDB header:ribosome
Chain: A: PDB Molecule:nucleolar protein of 40 kda;
PDBTitle: solution structure of the s1 rna binding domain of human2 hypothetical protein flj11067
10c4nnkA_
98.2 25
PDB header:ribosomal protein
Chain: A: PDB Molecule:30s ribosomal protein s1;
PDBTitle: structural basis for targeting the ribosomal protein s1 of2 mycobacterium tuberculosis by pyrazinamide
11c1yz6A_
98.1 23
PDB header:translation
Chain: A: PDB Molecule:probable translation initiation factor 2 alpha
PDBTitle: crystal structure of intact alpha subunit of aif2 from2 pyrococcus abyssi
12d1q46a2
98.1 20
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like
13d2je6i1
98.0 26
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like
14c2ba0A_
98.0 19
PDB header:rna binding protein
Chain: A: PDB Molecule:archaeal exosome rna binding protein rrp4;
PDBTitle: archaeal exosome core
15c3j81j_
98.0 19
PDB header:ribosome
Chain: J: PDB Molecule:us4;
PDBTitle: cryoem structure of a partial yeast 48s preinitiation complex
16c2k4kA_
98.0 27
PDB header:rna binding protein
Chain: A: PDB Molecule:general stress protein 13;
PDBTitle: solution structure of gsp13 from bacillus subtilis
17c2khjA_
98.0 25
PDB header:ribosomal protein
Chain: A: PDB Molecule:30s ribosomal protein s1;
PDBTitle: nmr structure of the domain 6 of the e. coli ribosomal2 protein s1
18c2je6I_
98.0 17
PDB header:hydrolase
Chain: I: PDB Molecule:exosome complex rna-binding protein 1;
PDBTitle: structure of a 9-subunit archaeal exosome
19c1q8kA_
97.9 21
PDB header:translation
Chain: A: PDB Molecule:eukaryotic translation initiation factor 2
PDBTitle: solution structure of alpha subunit of human eif2
20d2nn6h1
97.9 21
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like
21c2eqsA_
not modelled 97.9 23
PDB header:hydrolase
Chain: A: PDB Molecule:atp-dependent rna helicase dhx8;
PDBTitle: solution structure of the s1 rna binding domain of human2 atp-dependent rna helicase dhx8
22c2khiA_
not modelled 97.9 22
PDB header:ribosomal protein
Chain: A: PDB Molecule:30s ribosomal protein s1;
PDBTitle: nmr structure of the domain 4 of the e. coli ribosomal2 protein s1
23c5x8r8_
not modelled 97.9 31
PDB header:ribosome
Chain: 8: PDB Molecule:30s ribosomal protein s1, chloroplastic;
PDBTitle: structure of the 30s small subunit of chloroplast ribosome from2 spinach
24d3bzka4
not modelled 97.9 27
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like
25c1q46A_
not modelled 97.9 22
PDB header:translation
Chain: A: PDB Molecule:translation initiation factor 2 alpha subunit;
PDBTitle: crystal structure of the eif2 alpha subunit from2 saccharomyces cerevisia
26d1sroa_
not modelled 97.8 27
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like
27d1wi5a_
not modelled 97.8 23
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like
28d1go3e1
not modelled 97.7 18
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like
29c5lm7A_
not modelled 97.7 24
PDB header:transcription
Chain: A: PDB Molecule:transcription termination/antitermination protein nusa;
PDBTitle: crystal structure of the lambda n-nus factor complex
30c3go5A_
not modelled 97.7 19
PDB header:gene regulation
Chain: A: PDB Molecule:multidomain protein with s1 rna-binding domains;
PDBTitle: crystal structure of a multidomain protein with nucleic acid binding2 domains (sp_0946) from streptococcus pneumoniae tigr4 at 1.40 a3 resolution
31c2mfiA_
not modelled 97.7 23
PDB header:ribosomal protein
Chain: A: PDB Molecule:30s ribosomal protein s1;
PDBTitle: domain 1 of e. coli ribosomal protein s1
32c2oceA_
not modelled 97.6 27
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein pa5201;
PDBTitle: crystal structure of tex family protein pa5201 from2 pseudomonas aeruginosa
33d1hh2p1
not modelled 97.6 26
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like
34c2ba1B_
not modelled 97.6 21
PDB header:rna binding protein
Chain: B: PDB Molecule:archaeal exosome rna binding protein csl4;
PDBTitle: archaeal exosome core
35c1hh2P_
not modelled 97.5 26
PDB header:transcription regulation
Chain: P: PDB Molecule:n utilization substance protein a;
PDBTitle: crystal structure of nusa from thermotoga maritima
36d2nn6i1
not modelled 97.5 25
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like
37c2k52A_
not modelled 97.4 24
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein mj1198;
PDBTitle: structure of uncharacterized protein mj1198 from2 methanocaldococcus jannaschii. northeast structural3 genomics target mjr117b
38c2ahoB_
not modelled 97.4 28
PDB header:translation
Chain: B: PDB Molecule:translation initiation factor 2 alpha subunit;
PDBTitle: structure of the archaeal initiation factor eif2 alpha-gamma2 heterodimer from sulfolobus solfataricus complexed with gdpnp
39d1y14b1
not modelled 97.3 12
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like
40d1kl9a2
not modelled 97.3 20
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like
41c1l2fA_
not modelled 97.3 27
PDB header:transcription
Chain: A: PDB Molecule:n utilization substance protein a;
PDBTitle: crystal structure of nusa from thermotoga maritima: a2 structure-based role of the n-terminal domain
42d2ahob2
not modelled 97.1 23
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like
43c3psiA_
not modelled 97.1 13
PDB header:transcription
Chain: A: PDB Molecule:transcription elongation factor spt6;
PDBTitle: crystal structure of the spt6 core domain from saccharomyces2 cerevisiae, form spt6(239-1451)
44c2nn6I_
not modelled 97.1 25
PDB header:hydrolase/transferase
Chain: I: PDB Molecule:3'-5' exoribonuclease csl4 homolog;
PDBTitle: structure of the human rna exosome composed of rrp41, rrp45,2 rrp46, rrp43, mtr3, rrp42, csl4, rrp4, and rrp40
45c5xq5A_
not modelled 97.0 21
PDB header:ribosomal protein
Chain: A: PDB Molecule:30s ribosomal protein s1;
PDBTitle: nmr structure of the domain 5 of the e. coli ribosomal protein s1
46c5x50G_
not modelled 96.9 15
PDB header:transferase
Chain: G: PDB Molecule:rna polymerase ii subunit;
PDBTitle: rna polymerase ii from komagataella pastoris (type-2 crystal)
47c6gmhM_
not modelled 96.9 17
PDB header:transcription
Chain: M: PDB Molecule:transcription elongation factor spt6,transcription
PDBTitle: structure of activated transcription complex pol ii-dsif-paf-spt6
48c6flqF_
not modelled 96.8 23
PDB header:transcription
Chain: F: PDB Molecule:transcription termination/antitermination protein nusa;
PDBTitle: cryoem structure of e.coli rna polymerase paused elongation complex2 bound to nusa
49c2mflA_
not modelled 96.8 16
PDB header:ribosomal protein
Chain: A: PDB Molecule:30s ribosomal protein s1;
PDBTitle: domain 2 of e. coli ribosomal protein s1
50c6d6rH_
not modelled 96.8 18
PDB header:hydrolase
Chain: H: PDB Molecule:exosome complex component rrp4;
PDBTitle: human nuclear exosome-mtr4 rna complex - composite map after focused2 reconstruction
51c2c35F_
not modelled 96.8 13
PDB header:transferase
Chain: F: PDB Molecule:dna-directed rna polymerase ii 19 kda polypeptide;
PDBTitle: subunits rpb4 and rpb7 of human rna polymerase ii
52c4ifdH_
not modelled 96.7 23
PDB header:hydrolase/rna
Chain: H: PDB Molecule:exosome complex component rrp4;
PDBTitle: crystal structure of an 11-subunit eukaryotic exosome complex bound to2 rna
53c2b8kG_
not modelled 96.7 11
PDB header:transferase
Chain: G: PDB Molecule:dna-directed rna polymerase ii 19 kda polypeptide;
PDBTitle: 12-subunit rna polymerase ii
54d2nn6g1
not modelled 96.6 19
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like
55c3h0gS_
not modelled 96.6 19
PDB header:transcription
Chain: S: PDB Molecule:dna-directed rna polymerase ii subunit rpb7;
PDBTitle: rna polymerase ii from schizosaccharomyces pombe
56c1kl9A_
not modelled 96.6 24
PDB header:translation
Chain: A: PDB Molecule:eukaryotic translation initiation factor 2 subunit 1;
PDBTitle: crystal structure of the n-terminal segment of human eukaryotic2 initiation factor 2alpha
57c4q7jD_
not modelled 96.6 24
PDB header:translation/transferase
Chain: D: PDB Molecule:30s ribosomal protein s1;
PDBTitle: complex structure of viral rna polymerase
58c4ifdI_
not modelled 96.5 32
PDB header:hydrolase/rna
Chain: I: PDB Molecule:exosome complex component csl4;
PDBTitle: crystal structure of an 11-subunit eukaryotic exosome complex bound to2 rna
59c1go3E_
not modelled 96.2 18
PDB header:transferase
Chain: E: PDB Molecule:dna-directed rna polymerase subunit e;
PDBTitle: structure of an archeal homolog of the eukaryotic rna polymerase ii2 rpb4/rpb7 complex
60d2c35b1
not modelled 96.2 13
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like
61c4qiwE_
not modelled 96.2 23
PDB header:transcription
Chain: E: PDB Molecule:dna-directed rna polymerase, subunit e';
PDBTitle: crystal structure of euryarchaeal rna polymerase from thermococcus2 kodakarensis
62c2bh8B_
not modelled 96.0 15
PDB header:transcription
Chain: B: PDB Molecule:1b11;
PDBTitle: combinatorial protein 1b11
63c1nt9G_
not modelled 96.0 11
PDB header:transcription, transferase
Chain: G: PDB Molecule:dna-directed rna polymerase ii 19 kd polypeptide;
PDBTitle: complete 12-subunit rna polymerase ii
64c4mtnA_
not modelled 96.0 23
PDB header:transcription regulator
Chain: A: PDB Molecule:transcription termination factor nusa;
PDBTitle: crystal structure of transcription termination factor nusa from2 planctomyces limnophilus dsm 3776
65c4nbqB_
not modelled 95.7 26
PDB header:transferase
Chain: B: PDB Molecule:polyribonucleotide nucleotidyltransferase;
PDBTitle: structure of the polynucleotide phosphorylase (cbu_0852) from coxiella2 burnetii
66c2pmzE_
not modelled 95.7 19
PDB header:translation, transferase
Chain: E: PDB Molecule:dna-directed rna polymerase subunit e;
PDBTitle: archaeal rna polymerase from sulfolobus solfataricus
67c3d0fA_
not modelled 94.9 16
PDB header:transferase
Chain: A: PDB Molecule:penicillin-binding 1 transmembrane protein mrca;
PDBTitle: structure of the big_1156.2 domain of putative penicillin-binding2 protein mrca from nitrosomonas europaea atcc 19718
68d2ja9a1
not modelled 94.8 20
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like
69c2nn6H_
not modelled 94.8 19
PDB header:hydrolase/transferase
Chain: H: PDB Molecule:exosome complex exonuclease rrp4;
PDBTitle: structure of the human rna exosome composed of rrp41, rrp45,2 rrp46, rrp43, mtr3, rrp42, csl4, rrp4, and rrp40
70c2nn6G_
not modelled 94.8 18
PDB header:hydrolase/transferase
Chain: G: PDB Molecule:exosome complex exonuclease rrp40;
PDBTitle: structure of the human rna exosome composed of rrp41, rrp45,2 rrp46, rrp43, mtr3, rrp42, csl4, rrp4, and rrp40
71c3aqqD_
not modelled 94.4 19
PDB header:dna binding protein
Chain: D: PDB Molecule:calcium-regulated heat stable protein 1;
PDBTitle: crystal structure of human crhsp-24
72c5xguB_
not modelled 94.3 22
PDB header:hydrolase
Chain: B: PDB Molecule:ribonuclease r;
PDBTitle: escherichia coli. rnase r
73d2asba1
not modelled 94.2 22
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like
74c2ja9A_
not modelled 93.7 20
PDB header:rna-binding protein
Chain: A: PDB Molecule:exosome complex exonuclease rrp40;
PDBTitle: structure of the n-terminal deletion of yeast exosome2 component rrp40
75c1k0rB_
not modelled 93.7 21
PDB header:transcription
Chain: B: PDB Molecule:nusa;
PDBTitle: crystal structure of mycobacterium tuberculosis nusa
76c2asbA_
not modelled 93.7 22
PDB header:transcription/rna
Chain: A: PDB Molecule:transcription elongation protein nusa;
PDBTitle: structure of a mycobacterium tuberculosis nusa-rna complex
77c2kcmA_
not modelled 91.4 27
PDB header:nucleic acid binding protein
Chain: A: PDB Molecule:cold shock domain family protein;
PDBTitle: solution nmr structure of the n-terminal ob-domain of so_1732 from2 shewanella oneidensis. northeast structural genomics consortium3 target sor210a.
78c4pmwB_
not modelled 91.0 16
PDB header:hydrolase/rna
Chain: B: PDB Molecule:dis3-like exonuclease 2;
PDBTitle: structure of mouse dis3l2 in complex with oligou rna substrate
79c5c0wJ_
not modelled 90.9 23
PDB header:hydrolase/rna
Chain: J: PDB Molecule:exosome complex exonuclease dis3;
PDBTitle: structure of a 12-subunit nuclear exosome complex bound to single-2 stranded rna substrates
80c4a4iA_
not modelled 90.6 17
PDB header:rna binding protein
Chain: A: PDB Molecule:protein lin-28 homolog b;
PDBTitle: crystal structure of the human lin28b cold shock domain
81d1c9oa_
not modelled 90.2 15
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like
82c2wp8J_
not modelled 90.1 23
PDB header:hydrolase
Chain: J: PDB Molecule:exosome complex exonuclease dis3;
PDBTitle: yeast rrp44 nuclease
83d1h95a_
not modelled 89.2 14
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like
84c2ljpA_
not modelled 88.9 16
PDB header:hydrolase
Chain: A: PDB Molecule:ribonuclease p protein component;
PDBTitle: backbone 1h, 13c, and 15n chemical shift assignments for e.coli2 ribonuclease p protein
85c2hnkC_
not modelled 87.9 24
PDB header:transferase
Chain: C: PDB Molecule:sam-dependent o-methyltransferase;
PDBTitle: crystal structure of sam-dependent o-methyltransferase from pathogenic2 bacterium leptospira interrogans
86d1mjca_
not modelled 87.7 17
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like
87c2ckzB_
not modelled 87.5 9
PDB header:transferase
Chain: B: PDB Molecule:dna-directed rna polymerase iii 25 kd polypeptide;
PDBTitle: x-ray structure of rna polymerase iii subcomplex c17-c25.
88d2es2a1
not modelled 87.3 15
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like
89d1g6pa_
not modelled 86.8 16
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like
90c4ifdG_
not modelled 86.7 18
PDB header:hydrolase/rna
Chain: G: PDB Molecule:exosome complex component rrp40;
PDBTitle: crystal structure of an 11-subunit eukaryotic exosome complex bound to2 rna
91c3ayhB_
not modelled 86.5 12
PDB header:transcription
Chain: B: PDB Molecule:dna-directed rna polymerase iii subunit rpc8;
PDBTitle: crystal structure of the c17/25 subcomplex from s. pombe rna2 polymerase iii
92c2lssA_
not modelled 85.4 16
PDB header:rna binding protein, dna binding protein
Chain: A: PDB Molecule:cold shock-like protein;
PDBTitle: solution structure of the r. rickettsii cold shock-like protein
93c4zu9A_
not modelled 83.7 23
PDB header:translation
Chain: A: PDB Molecule:elongation factor selb;
PDBTitle: crystal structure of bacterial selenocysteine-specific elongation2 factor ef-sec
94c2eqjA_
not modelled 82.9 15
PDB header:transcription
Chain: A: PDB Molecule:metal-response element-binding transcription
PDBTitle: solution structure of the tudor domain of metal-response2 element-binding transcription factor 2
95c3pihA_
not modelled 80.8 21
PDB header:hydrolase/dna
Chain: A: PDB Molecule:uvrabc system protein a;
PDBTitle: t. maritima uvra in complex with fluorescein-modified dna
96c2bx9J_
not modelled 79.6 53
PDB header:transcription regulation
Chain: J: PDB Molecule:tryptophan rna-binding attenuator protein-inhibitory
PDBTitle: crystal structure of b.subtilis anti-trap protein, an2 antagonist of trap-rna interactions
97c3ld0Q_
not modelled 79.5 46
PDB header:gene regulation
Chain: Q: PDB Molecule:inhibitor of trap, regulated by t-box (trp) sequence rtpa;
PDBTitle: crystal structure of b.licheniformis anti-trap protein, an antagonist2 of trap-rna interactions
98c6j9eF_
not modelled 79.3 30
PDB header:transcription
Chain: F: PDB Molecule:transcription termination/antitermination protein nusa;
PDBTitle: cryo-em structure of xanthomonos oryzae transcription elongation2 complex with nusa and the bacteriophage protein p7
99d1k3ra1
not modelled 79.1 18
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Hypothetical protein MTH1 (MT0001), insert domain
100c2mqhA_
not modelled 78.9 24
PDB header:dna binding protein
Chain: A: PDB Molecule:nucleic acid binding protein;
PDBTitle: solution structure of the chlamydomonas reinhardtii nab1 cold shock2 domain, csd1
101c2e5pA_
not modelled 78.0 20
PDB header:transcription
Chain: A: PDB Molecule:phd finger protein 1;
PDBTitle: solution structure of the tudor domain of phd finger2 protein 1 (phf1 protein)
102d1nlta3
not modelled 77.3 30
Fold:DnaJ/Hsp40 cysteine-rich domain
Superfamily:DnaJ/Hsp40 cysteine-rich domain
Family:DnaJ/Hsp40 cysteine-rich domain
103d1nz0a_
not modelled 76.8 28
Fold:Ribosomal protein S5 domain 2-like
Superfamily:Ribosomal protein S5 domain 2-like
Family:RNase P protein
104c4toiA_
not modelled 76.8 24
PDB header:ribosomal protein
Chain: A: PDB Molecule:30s ribosomal protein s2,ribosomal protein s1;
PDBTitle: crystal structure of e.coli ribosomal protein s2 in complex with n-2 terminal domain of s1
105c5o6fA_
not modelled 76.7 13
PDB header:dna binding protein
Chain: A: PDB Molecule:cold-shock protein;
PDBTitle: nmr structure of cold shock protein a from corynebacterium2 pseudotuberculosis
106c3izq1_
not modelled 75.8 17
PDB header:ribosomal protein,hydrolase
Chain: 1: PDB Molecule:elongation factor 1 alpha-like protein;
PDBTitle: structure of the dom34-hbs1-gdpnp complex bound to a translating2 ribosome
107d1d6ta_
not modelled 75.4 22
Fold:Ribosomal protein S5 domain 2-like
Superfamily:Ribosomal protein S5 domain 2-like
Family:RNase P protein
108c2k5nA_
not modelled 75.4 18
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative cold-shock protein;
PDBTitle: solution nmr structure of the n-terminal domain of protein eca15802 from erwinia carotovora, northeast structural genomics consortium3 target ewr156a
109d1a6fa_
not modelled 75.1 24
Fold:Ribosomal protein S5 domain 2-like
Superfamily:Ribosomal protein S5 domain 2-like
Family:RNase P protein
110c4mo1B_
not modelled 74.8 11
PDB header:transcription regulator
Chain: B: PDB Molecule:antitermination protein q;
PDBTitle: crystal structure of antitermination protein q from bacteriophage2 lambda. northeast structural genomics consortium target or18a.
111c3pnwX_
not modelled 72.8 17
PDB header:protein binding/immune system
Chain: X: PDB Molecule:tudor domain-containing protein 3;
PDBTitle: crystal structure of the tudor domain of human tdrd3 in complex with2 an anti-tdrd3 fab
112c2pe4A_
not modelled 72.5 21
PDB header:hydrolase
Chain: A: PDB Molecule:hyaluronidase-1;
PDBTitle: structure of human hyaluronidase 1, a hyaluronan hydrolyzing enzyme2 involved in tumor growth and angiogenesis
113c3zqjC_
not modelled 72.0 60
PDB header:dna binding protein
Chain: C: PDB Molecule:uvrabc system protein a;
PDBTitle: mycobacterium tuberculosis uvra
114c2ytvA_
not modelled 71.9 24
PDB header:rna binding protein
Chain: A: PDB Molecule:cold shock domain-containing protein e1;
PDBTitle: solution structure of the fifth cold-shock domain of the human2 kiaa0885 protein (unr protein)
115c5udbD_
not modelled 71.8 16
PDB header:replication
Chain: D: PDB Molecule:origin recognition complex subunit 4;
PDBTitle: structural basis of mcm2-7 replicative helicase loading by orc-cdc62 and cdt1
116c2m0oA_
not modelled 70.8 19
PDB header:peptide binding protein
Chain: A: PDB Molecule:phd finger protein 1;
PDBTitle: the solution structure of human phf1 in complex with h3k36me3
117c1nltA_
not modelled 68.5 28
PDB header:protein transport
Chain: A: PDB Molecule:mitochondrial protein import protein mas5;
PDBTitle: the crystal structure of hsp40 ydj1
118c3tr6A_
not modelled 67.8 23
PDB header:transferase
Chain: A: PDB Molecule:o-methyltransferase;
PDBTitle: structure of a o-methyltransferase from coxiella burnetii
119d2ix0a2
not modelled 67.0 15
Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like
120d1fcqa_
not modelled 66.5 28
Fold:TIM beta/alpha-barrel
Superfamily:(Trans)glycosidases
Family:Bee venom hyaluronidase

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite