Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2446c_(-)_2745777_2746148
DateWed Aug 7 12:50:07 BST 2019
Unique Job IDaa61365c6a99b691
SequenceMTDRSREPAD ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:16.269 Y:33.790 Z:21.358
Model (left) based on template c6hu9u_
Top template information
PDB header:oxidoreductase/electron transport
Chain: U: PDB Molecule:cytochrome b-c1 complex subunit 10;
PDBTitle: iii2-iv2 mitochondrial respiratory supercomplex from s. cerevisiae
Confidence and coverage
Confidence: 72.7% Coverage: 20%
24 residues ( 20% of your sequence) have been modelled with 72.7% confidence by the single highest scoring template.
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3D viewing
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c6hu9u_



72.7 17
PDB header:oxidoreductase/electron transport
Chain: U: PDB Molecule:cytochrome b-c1 complex subunit 10;
PDBTitle: iii2-iv2 mitochondrial respiratory supercomplex from s. cerevisiae
2c6mhqE_



41.3 12
PDB header:membrane protein
Chain: E: PDB Molecule:gap junction alpha-3 protein, connexin-46;
PDBTitle: structure of connexin-46 intercellular gap junction channel at 3.42 angstrom resolution by cryoem
3d2aqaa1



31.4 20
Fold:Rubredoxin-like
Superfamily:Nop10-like SnoRNP
Family:Nucleolar RNA-binding protein Nop10-like
4c4fc4H_



28.1 22
PDB header:transport protein
Chain: H: PDB Molecule:nitrite transporter nirc;
PDBTitle: fnt family ion channel
5c2fotC_



16.0 25
PDB header:metal binding, structural protein
Chain: C: PDB Molecule:alpha-ii spectrin spectrin;
PDBTitle: crystal structure of the complex between calmodulin and2 alphaii-spectrin
6d3ehbb2



15.1 11
Fold:Transmembrane helix hairpin
Superfamily:Cytochrome c oxidase subunit II-like, transmembrane region
Family:Cytochrome c oxidase subunit II-like, transmembrane region
7d3dtub2



11.0 13
Fold:Transmembrane helix hairpin
Superfamily:Cytochrome c oxidase subunit II-like, transmembrane region
Family:Cytochrome c oxidase subunit II-like, transmembrane region
8c1pjmA_



8.5 19
PDB header:protein transport
Chain: A: PDB Molecule:retinoblastoma-associated protein;
PDBTitle: mouse importin alpha-bipartite nls from human2 retinoblastoma protein complex
9c6hwhX_



5.5 19
PDB header:electron transport
Chain: X: PDB Molecule:cytochrome c oxidase polypeptide 4;
PDBTitle: structure of a functional obligate respiratory supercomplex from2 mycobacterium smegmatis

Binding site prediction 

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below