Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2459_(-)_2760864_2762390
DateWed Aug 7 12:50:08 BST 2019
Unique Job IDd6c1d2360e2b4d12
SequenceMTPRQRLTVL ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:56.171 Y:56.551 Z:64.429
Model (left) based on template d1pw4a_
Top template information
Fold:MFS general substrate transporter
Superfamily:MFS general substrate transporter
Family:Glycerol-3-phosphate transporter
Confidence and coverage
Confidence:100.0% Coverage: 78%
398 residues ( 78% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
470 residues ( 93%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
3D viewing
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Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

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Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d1pw4a_



100.0 14
Fold:MFS general substrate transporter
Superfamily:MFS general substrate transporter
Family:Glycerol-3-phosphate transporter
2c4zp0A_



100.0 18
PDB header:transport protein
Chain: A: PDB Molecule:multidrug transporter mdfa;
PDBTitle: crystal structure of e. coli multidrug transporter mdfa in complex2 with deoxycholate
3c6e9oA_



100.0 13
PDB header:membrane protein
Chain: A: PDB Molecule:d-galactonate transport;
PDBTitle: e. coli d-galactonate:proton symporter mutant e133q in the outward2 substrate-bound form
4c3wdoA_



100.0 20
PDB header:transport protein
Chain: A: PDB Molecule:mfs transporter;
PDBTitle: structure of e. coli yajr transporter
5c4cl5B_



100.0 13
PDB header:transport protein
Chain: B: PDB Molecule:nitrate transporter 1.1;
PDBTitle: crystal structure of the nitrate transporter nrt1.1 from2 arabidopsis thaliana in complex with nitrate.
6c6gs7A_



100.0 13
PDB header:membrane protein
Chain: A: PDB Molecule:dipeptide and tripeptide permease a;
PDBTitle: crystal structure of peptide transporter dtpa-nanobody in glycine2 buffer
7c4ikyA_



100.0 16
PDB header:transport protein
Chain: A: PDB Molecule:di-tripeptide abc transporter (permease);
PDBTitle: crystal structure of peptide transporter pot (e310q mutant) in complex2 with sulfate
8c4apsB_



100.0 14
PDB header:transport protein
Chain: B: PDB Molecule:di-or tripeptide h+ symporter;
PDBTitle: crystal structure of a pot family peptide transporter in an inward2 open conformation.
9c6h7dA_



100.0 14
PDB header:membrane protein
Chain: A: PDB Molecule:sugar transport protein 10;
PDBTitle: crystal structure of a. thaliana sugar transport protein 10 in complex2 with glucose in the outward occluded state
10c2gfpA_



100.0 18
PDB header:membrane protein
Chain: A: PDB Molecule:multidrug resistance protein d;
PDBTitle: structure of the multidrug transporter emrd from2 escherichia coli
11c4ldsB_



100.0 16
PDB header:transport protein, membrane protein
Chain: B: PDB Molecule:bicyclomycin resistance protein tcab;
PDBTitle: the inward-facing structure of the glucose transporter from2 staphylococcus epidermidis
12c6g9xB_



100.0 15
PDB header:membrane protein
Chain: B: PDB Molecule:major facilitator superfamily mfs_1;
PDBTitle: crystal structure of a mfs transporter at 2.54 angstroem resolution
13c6ei3A_



100.0 14
PDB header:membrane protein
Chain: A: PDB Molecule:proton-dependent oligopeptide transporter family protein;
PDBTitle: crystal structure of auto inhibited pot family peptide transporter
14c5c65A_



100.0 14
PDB header:transport protein
Chain: A: PDB Molecule:solute carrier family 2, facilitated glucose transporter
PDBTitle: structure of the human glucose transporter glut3 / slc2a3
15c6exsA_



100.0 13
PDB header:membrane protein
Chain: A: PDB Molecule:peptide abc transporter permease;
PDBTitle: crystal structure of a pot family transporter in complex with2 thioalcohol conjugated peptide.
16c4w6vA_



100.0 14
PDB header:transport protein
Chain: A: PDB Molecule:di-/tripeptide transporter;
PDBTitle: crystal structure of a peptide transporter from yersinia2 enterocolitica at 3 a resolution
17c2xutC_



100.0 11
PDB header:transport protein
Chain: C: PDB Molecule:proton/peptide symporter family protein;
PDBTitle: crystal structure of a proton dependent oligopeptide (pot) family2 transporter.
18c3o7pA_



100.0 13
PDB header:transport protein
Chain: A: PDB Molecule:l-fucose-proton symporter;
PDBTitle: crystal structure of the e.coli fucose:proton symporter, fucp (n162a)
19c4gbzA_



100.0 12
PDB header:transport protein
Chain: A: PDB Molecule:d-xylose-proton symporter;
PDBTitle: the structure of the mfs (major facilitator superfamily) proton:xylose2 symporter xyle bound to d-glucose
20c4pypA_



100.0 13
PDB header:transport protein
Chain: A: PDB Molecule:solute carrier family 2, facilitated glucose transporter
PDBTitle: crystal structure of the human glucose transporter glut1
21c4lepB_



not modelled 100.0 12
PDB header:membrane protein, tranport protein
Chain: B: PDB Molecule:proton:oligopeptide symporter pot family;
PDBTitle: structural insights into substrate recognition in proton dependent2 oligopeptide transporters
22c1pv7B_



not modelled 100.0 13
PDB header:transport protein
Chain: B: PDB Molecule:lactose permease;
PDBTitle: crystal structure of lactose permease with tdg
23d1pv7a_



not modelled 100.0 13
Fold:MFS general substrate transporter
Superfamily:MFS general substrate transporter
Family:LacY-like proton/sugar symporter
24c4j05A_



not modelled 100.0 19
PDB header:transport protein
Chain: A: PDB Molecule:phosphate transporter;
PDBTitle: crystal structure of a eukaryotic phosphate transporter
25c4ybqB_



not modelled 100.0 12
PDB header:transport protein/immune system
Chain: B: PDB Molecule:solute carrier family 2, facilitated glucose transporter
PDBTitle: rat glut5 with fv in the outward-open form
26c4q65A_



not modelled 100.0 11
PDB header:transport protein
Chain: A: PDB Molecule:dipeptide permease d;
PDBTitle: structure of the e. coli peptide transporter ybgh
27c4iu8A_



not modelled 100.0 10
PDB header:transport protein
Chain: A: PDB Molecule:nitrite extrusion protein 2;
PDBTitle: crystal structure of a membrane transporter (selenomethionine2 derivative)
28c4iu9A_



not modelled 100.0 12
PDB header:transport protein
Chain: A: PDB Molecule:nitrite extrusion protein 2;
PDBTitle: crystal structure of a membrane transporter
29c5aynA_



not modelled 100.0 15
PDB header:transport protein
Chain: A: PDB Molecule:solute carrier family 39 (iron-regulated transporter);
PDBTitle: crystal structure of a bacterial homologue of iron transporter2 ferroportin in outward-facing state
30c5aymA_



not modelled 100.0 15
PDB header:transport protein
Chain: A: PDB Molecule:solute carrier family 39 (iron-regulated transporter);
PDBTitle: crystal structure of a bacterial homologue of iron transporter2 ferroportin in outward-facing state with soaked iron
31c4m64D_



not modelled 99.8 11
PDB header:transport protein
Chain: D: PDB Molecule:melibiose carrier protein;
PDBTitle: 3d crystal structure of na+/melibiose symporter of salmonella2 typhimurium
32c6ob7A_



not modelled 99.8 13
PDB header:transport protein
Chain: A: PDB Molecule:equilibrative nucleoside transporter 1;
PDBTitle: human equilibrative nucleoside transporter-1, dilazep bound
33c6c14A_



not modelled 46.8 3
PDB header:membrane protein, metal transport
Chain: A: PDB Molecule:protocadherin-15;
PDBTitle: cryoem structure of mouse pcdh15-1ec-lhfpl5 complex
34c3b9yA_



not modelled 33.2 9
PDB header:transport protein
Chain: A: PDB Molecule:ammonium transporter family rh-like protein;
PDBTitle: crystal structure of the nitrosomonas europaea rh protein
35d1jhfa1



not modelled 32.0 13
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:LexA repressor, N-terminal DNA-binding domain
36c2g9pA_



not modelled 19.1 21
PDB header:antimicrobial protein
Chain: A: PDB Molecule:antimicrobial peptide latarcin 2a;
PDBTitle: nmr structure of a novel antimicrobial peptide, latarcin 2a,2 from spider (lachesana tarabaevi) venom
37c5y79A_



not modelled 13.9 9
PDB header:transport protein
Chain: A: PDB Molecule:putative hexose phosphate translocator;
PDBTitle: crystal structure of the triose-phosphate/phosphate translocator in2 complex with 3-phosphoglycerate
38d1lghb_



not modelled 11.8 21
Fold:Light-harvesting complex subunits
Superfamily:Light-harvesting complex subunits
Family:Light-harvesting complex subunits
39c3rkoF_



not modelled 11.6 16
PDB header:oxidoreductase
Chain: F: PDB Molecule:nadh-quinone oxidoreductase subunit j;
PDBTitle: crystal structure of the membrane domain of respiratory complex i from2 e. coli at 3.0 angstrom resolution
40c2k9pA_



not modelled 10.1 20
PDB header:membrane protein
Chain: A: PDB Molecule:pheromone alpha factor receptor;
PDBTitle: structure of tm1_tm2 in lppg micelles
41c6et5u_



not modelled 9.8 18
PDB header:photosynthesis
Chain: U: PDB Molecule:light-harvesting protein b-1015 gamma chain;
PDBTitle: reaction centre light harvesting complex 1 from blc. virids
42c3wmmP_



not modelled 9.5 19
PDB header:photosynthesis
Chain: P: PDB Molecule:lh1 beta polypeptide;
PDBTitle: crystal structure of the lh1-rc complex from thermochromatium tepidum2 in c2 form
43c3v5uA_



not modelled 9.2 11
PDB header:metal transport
Chain: A: PDB Molecule:uncharacterized membrane protein mj0091;
PDBTitle: structure of sodium/calcium exchanger from methanocaldococcus2 jannaschii dsm 2661
44c1wrgA_



not modelled 8.4 17
PDB header:membrane protein
Chain: A: PDB Molecule:light-harvesting protein b-880, beta chain;
PDBTitle: light-harvesting complex 1 beta subunit from wild-type2 rhodospirillum rubrum
45c2l6wB_



not modelled 7.9 25
PDB header:membrane protein
Chain: B: PDB Molecule:beta-type platelet-derived growth factor receptor;
PDBTitle: pdgfr beta-tm
46c2l6wA_



not modelled 7.9 25
PDB header:membrane protein
Chain: A: PDB Molecule:beta-type platelet-derived growth factor receptor;
PDBTitle: pdgfr beta-tm
47d3proc1



not modelled 7.8 10
Fold:Alpha-lytic protease prodomain-like
Superfamily:Alpha-lytic protease prodomain
Family:Alpha-lytic protease prodomain
48c4dveA_



not modelled 7.7 6
PDB header:transport protein
Chain: A: PDB Molecule:biotin transporter bioy;
PDBTitle: crystal structure at 2.1 a of the s-component for biotin from an ecf-2 type abc transporter
49c6nbxG_



not modelled 7.0 11
PDB header:oxidoreductase
Chain: G: PDB Molecule:nadh-quinone oxidoreductase subunit j;
PDBTitle: t.elongatus ndh (data-set 2)
50c5kzoA_



not modelled 7.0 17
PDB header:transcription
Chain: A: PDB Molecule:neurogenic locus notch homolog protein 1;
PDBTitle: notch1 transmembrane and associated juxtamembrane segment
51d1stza1



not modelled 6.8 18
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Heat-inducible transcription repressor HrcA, N-terminal domain
52c2inpD_



not modelled 6.8 17
PDB header:oxidoreductase
Chain: D: PDB Molecule:phenol hydroxylase component phl;
PDBTitle: structure of the phenol hydroxylase-regulatory protein2 complex
53d2iuba2



not modelled 6.6 5
Fold:Transmembrane helix hairpin
Superfamily:Magnesium transport protein CorA, transmembrane region
Family:Magnesium transport protein CorA, transmembrane region
54c4kppA_



not modelled 6.0 14
PDB header:membrane protein
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of h+/ca2+ exchanger cax
55c6dstA_



not modelled 5.5 8
PDB header:toxin
Chain: A: PDB Molecule:melittin;
PDBTitle: recombinant melittin
56c2mltA_



not modelled 5.5 8
PDB header:toxin (hemolytic polypeptide)
Chain: A: PDB Molecule:melittin;
PDBTitle: melittin
57c2mltB_



not modelled 5.5 8
PDB header:toxin (hemolytic polypeptide)
Chain: B: PDB Molecule:melittin;
PDBTitle: melittin
58c6o4mA_



not modelled 5.5 8
PDB header:toxin
Chain: A: PDB Molecule:melittin;
PDBTitle: racemic melittin
59c6o4mB_



not modelled 5.5 8
PDB header:toxin
Chain: B: PDB Molecule:melittin;
PDBTitle: racemic melittin
60c2qtsA_



not modelled 5.5 22
PDB header:membrane protein
Chain: A: PDB Molecule:acid-sensing ion channel;
PDBTitle: structure of an acid-sensing ion channel 1 at 1.9 a resolution and low2 ph
61d1jo5a_



not modelled 5.5 11
Fold:Light-harvesting complex subunits
Superfamily:Light-harvesting complex subunits
Family:Light-harvesting complex subunits
62d1fftb2



not modelled 5.4 13
Fold:Transmembrane helix hairpin
Superfamily:Cytochrome c oxidase subunit II-like, transmembrane region
Family:Cytochrome c oxidase subunit II-like, transmembrane region

Binding site prediction 

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Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below