Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2468A_(RVBD2468A)_2772108_2772341
DateWed Aug 7 12:50:09 BST 2019
Unique Job IDea392de40531df9f
SequenceMEIHLFFVGI ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:40.485 Y:47.755 Z:78.891
Model (left) based on template c6adqI_
Top template information
PDB header:electron transport
Chain: I: PDB Molecule:cytochrome c oxidase subunit ctaj;
PDBTitle: respiratory complex ciii2civ2sod2 from mycobacterium smegmatis
Confidence and coverage
Confidence: 99.9% Coverage: 81%
62 residues ( 81% of your sequence) have been modelled with 99.9% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c6adqI_



99.9 56
PDB header:electron transport
Chain: I: PDB Molecule:cytochrome c oxidase subunit ctaj;
PDBTitle: respiratory complex ciii2civ2sod2 from mycobacterium smegmatis
2c6hwhR_



99.6 56
PDB header:electron transport
Chain: R: PDB Molecule:msmeg_4693;
PDBTitle: structure of a functional obligate respiratory supercomplex from2 mycobacterium smegmatis
3d1fftb2



23.0 32
Fold:Transmembrane helix hairpin
Superfamily:Cytochrome c oxidase subunit II-like, transmembrane region
Family:Cytochrome c oxidase subunit II-like, transmembrane region
4c6hu9e_



19.5 12
PDB header:oxidoreductase/electron transport
Chain: E: PDB Molecule:cytochrome b-c1 complex subunit rieske, mitochondrial;
PDBTitle: iii2-iv2 mitochondrial respiratory supercomplex from s. cerevisiae
5c6h3wA_



17.1 25
PDB header:viral protein
Chain: A: PDB Molecule:envelopment polyprotein;
PDBTitle: la crosse virus glycoprotein gc head domain
6c6e3yE_



14.8 20
PDB header:signaling protein
Chain: E: PDB Molecule:receptor activity-modifying protein 1;
PDBTitle: cryo-em structure of the active, gs-protein complexed, human cgrp2 receptor
7d1gph11



12.0 20
Fold:PRTase-like
Superfamily:PRTase-like
Family:Phosphoribosyltransferases (PRTases)
8c3nk4C_



10.4 36
PDB header:cell adhesion
Chain: C: PDB Molecule:zona pellucida 3;
PDBTitle: crystal structure of full-length sperm receptor zp3 at 2.0 a2 resolution
9c3nk3C_



10.3 36
PDB header:cell adhesion
Chain: C: PDB Molecule:zona pellucida 3;
PDBTitle: crystal structure of full-length sperm receptor zp3 at 2.6 a2 resolution
10c2gesA_



10.2 43
PDB header:transferase
Chain: A: PDB Molecule:pantothenate kinase;
PDBTitle: pantothenate kinase from mycobacterium tuberculosis (mtpank) in2 complex with a coenzyme a derivative, form-i (rt)
11c2iifA_



10.0 36
PDB header:recombination/dna
Chain: A: PDB Molecule:integration host factor;
PDBTitle: single chain integration host factor mutant protein (scihf2-k45ae) in2 complex with dna
12c3tqcB_



9.5 43
PDB header:transferase
Chain: B: PDB Molecule:pantothenate kinase;
PDBTitle: structure of the pantothenate kinase (coaa) from coxiella burnetii
13c2lfwA_



9.2 33
PDB header:signaling protein
Chain: A: PDB Molecule:phyr sigma-like domain;
PDBTitle: nmr structure of the phyrsl-nepr complex from sphingomonas sp. fr1
14d1o9aa1



9.1 17
Fold:FnI-like domain
Superfamily:FnI-like domain
Family:Fibronectin type I module
15c3vu1A_



8.7 15
PDB header:transferase
Chain: A: PDB Molecule:putative uncharacterized protein ph0242;
PDBTitle: crystal structure of the c-terminal globular domain of2 oligosaccharyltransferase (phaglb-l, o74088_pyrho) from pyrococcus3 horikoshii
16d1sq5a_



8.7 43
Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Phosphoribulokinase/pantothenate kinase
17d2cg7a2



8.2 27
Fold:FnI-like domain
Superfamily:FnI-like domain
Family:Fibronectin type I module
18c2bzwB_



7.8 86
PDB header:transcription
Chain: B: PDB Molecule:bcl2-antagonist of cell death;
PDBTitle: the crystal structure of bcl-xl in complex with full-length bad
19c3c8uA_



7.3 33
PDB header:transferase
Chain: A: PDB Molecule:fructokinase;
PDBTitle: crystal structure of putative fructose transport system kinase2 (yp_612366.1) from silicibacter sp. tm1040 at 1.95 a resolution
20c2ec3A_



6.4 40
PDB header:cell adhesion
Chain: A: PDB Molecule:fibronectin;
PDBTitle: solution structure of the 11th fn1 domain from human2 fibronectin 1
21d1v54d_



not modelled 6.4 28
Fold:Single transmembrane helix
Superfamily:Mitochondrial cytochrome c oxidase subunit IV
Family:Mitochondrial cytochrome c oxidase subunit IV
22c1gph1_



not modelled 6.4 23
PDB header:transferase
Chain: 1: PDB Molecule:glutamine phosphoribosyl-pyrophosphate amidotransferase;
PDBTitle: structure of the allosteric regulatory enzyme of purine biosynthesis
23c5b3fB_



not modelled 6.2 43
PDB header:transferase
Chain: B: PDB Molecule:phosphoribulokinase/uridine kinase;
PDBTitle: crystal structure of phosphoribulokinase from methanospirillum2 hungatei
24d2rkya1



not modelled 6.1 36
Fold:FnI-like domain
Superfamily:FnI-like domain
Family:Fibronectin type I module
25d1f2fa_



not modelled 6.1 30
Fold:SH2-like
Superfamily:SH2 domain
Family:SH2 domain
26d2cg7a1



not modelled 5.9 36
Fold:FnI-like domain
Superfamily:FnI-like domain
Family:Fibronectin type I module
27c3ejhB_



not modelled 5.7 20
PDB header:cell adhesion
Chain: B: PDB Molecule:fibronectin;
PDBTitle: crystal structure of the fibronectin 8-9fni domain pair in complex2 with a type-i collagen peptide
28d1gwma_



not modelled 5.6 31
Fold:Galactose-binding domain-like
Superfamily:Galactose-binding domain-like
Family:Family 29 carbohydrate binding module, CBM29
29c2y69Q_



not modelled 5.6 28
PDB header:electron transport
Chain: Q: PDB Molecule:cytochrome c oxidase subunit 4 isoform 1;
PDBTitle: bovine heart cytochrome c oxidase re-refined with molecular oxygen
30d1v54g_



not modelled 5.3 20
Fold:Single transmembrane helix
Superfamily:Mitochondrial cytochrome c oxidase subunit VIa
Family:Mitochondrial cytochrome c oxidase subunit VIa
31c3wg7T_



not modelled 5.3 20
PDB header:oxidoreductase
Chain: T: PDB Molecule:cytochrome c oxidase subunit 6a2, mitochondrial;
PDBTitle: a 1.9 angstrom radiation damage free x-ray structure of large (420kda)2 protein by femtosecond crystallography
32c1m57H_



not modelled 5.1 11
PDB header:oxidoreductase
Chain: H: PDB Molecule:cytochrome c oxidase;
PDBTitle: structure of cytochrome c oxidase from rhodobacter2 sphaeroides (eq(i-286) mutant))
33d2i1sa1



not modelled 5.1 30
Fold:MM3350-like
Superfamily:MM3350-like
Family:MM3350-like
34d1ecfa1



not modelled 5.0 15
Fold:PRTase-like
Superfamily:PRTase-like
Family:Phosphoribosyltransferases (PRTases)

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Transmembrane helix prediction 

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