Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2470_(glbO)_2773188_2773574
DateWed Aug 7 12:50:09 BST 2019
Unique Job ID0826088051f504b2
SequenceMPKSFYDAVG ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:38.921 Y:40.399 Z:40.416
Model (left) based on template d1ngka_
Top template information
Fold:Globin-like
Superfamily:Globin-like
Family:Truncated hemoglobin
Confidence and coverage
Confidence:100.0% Coverage: 98%
126 residues ( 98% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
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Sequence analysis 

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Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d1ngka_



100.0 100
Fold:Globin-like
Superfamily:Globin-like
Family:Truncated hemoglobin
2c2bmmA_



100.0 59
PDB header:oxygen storage/transport
Chain: A: PDB Molecule:thermostable hemoglobin from thermobifida fusca;
PDBTitle: x-ray structure of a novel thermostable hemoglobin from the2 actinobacterium thermobifida fusca
3c4uurB_



100.0 32
PDB header:oxidoreductase
Chain: B: PDB Molecule:putative hemoglobin-like oxygen-binding protein;
PDBTitle: cold-adapted truncated hemoglobin from the antarctic marine bacterium2 pseudoalteromonas haloplanktis tac125
4c2xykB_



100.0 33
PDB header:oxygen storage/transport
Chain: B: PDB Molecule:2-on-2 hemoglobin;
PDBTitle: group ii 2-on-2 hemoglobin from the plant pathogen2 agrobacterium tumefaciens
5c4c0nA_



100.0 28
PDB header:oxygen transport
Chain: A: PDB Molecule:2-on-2 hemoglobin;
PDBTitle: crystal structure of non symbiotic plant hemoglobin ahb3 (glb3) from2 arabidopsis thaliana
6c5d1vB_



100.0 48
PDB header:oxygen transport
Chain: B: PDB Molecule:globin;
PDBTitle: crystal structure and thermal stability of hemoglobin from2 thermophilic phototrophic bacterium chloroflexus aurantiacus
7c4nk1B_



100.0 21
PDB header:oxygen binding
Chain: B: PDB Molecule:hemoglobin-like protein;
PDBTitle: crystal structure of phosphate-bound hell's gate globin iv
8c1dlyA_



100.0 18
PDB header:oxygen storage/transport
Chain: A: PDB Molecule:hemoglobin;
PDBTitle: x-ray crystal structure of hemoglobin from the green2 unicellular alga chlamydomonas eugametos
9d1dlya_



100.0 18
Fold:Globin-like
Superfamily:Globin-like
Family:Truncated hemoglobin
10d1idra_



100.0 21
Fold:Globin-like
Superfamily:Globin-like
Family:Truncated hemoglobin
11c3aq8A_



100.0 20
PDB header:oxygen binding
Chain: A: PDB Molecule:group 1 truncated hemoglobin;
PDBTitle: crystal structure of truncated hemoglobin from tetrahymena pyriformis,2 q46e mutant, fe(iii) form
12d1ux8a_



100.0 40
Fold:Globin-like
Superfamily:Globin-like
Family:Truncated hemoglobin
13d1dlwa_



100.0 19
Fold:Globin-like
Superfamily:Globin-like
Family:Truncated hemoglobin
14c2kscA_



100.0 18
PDB header:unknown function
Chain: A: PDB Molecule:cyanoglobin;
PDBTitle: solution structure of synechococcus sp. pcc 7002 hemoglobin
15c4xdiB_



100.0 16
PDB header:heme binding protein
Chain: B: PDB Molecule:chlamydomonas reinhardtii thb1;
PDBTitle: structure of chlamydomonas reinhardtii thb1
16d1s69a_



100.0 20
Fold:Globin-like
Superfamily:Globin-like
Family:Truncated hemoglobin
17c6bmeB_



100.0 20
PDB header:heme binding protein
Chain: B: PDB Molecule:truncated hemoglobin 4;
PDBTitle: crystal structure of chlamydomonas reinhardtii thb4
18c2ig3A_



100.0 16
PDB header:oxygen storage/transport
Chain: A: PDB Molecule:group iii truncated haemoglobin;
PDBTitle: crystal structure of group iii truncated hemoglobin from campylobacter2 jejuni
19d1tu9a_



99.1 20
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
20c2w31A_



98.3 13
PDB header:oxygen transport
Chain: A: PDB Molecule:globin;
PDBTitle: globin domain of geobacter sulfurreducens globin-coupled sensor
21c3s1jC_



not modelled 98.3 14
PDB header:oxygen transport, oxygen storage
Chain: C: PDB Molecule:hemoglobin-like flavoprotein;
PDBTitle: crystal structure of acetate-bound hell's gate globin i
22d1or4a_



not modelled 98.2 8
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
23c4zvbD_



not modelled 98.2 10
PDB header:signaling protein
Chain: D: PDB Molecule:diguanylate cyclase dosc;
PDBTitle: crystal structure of globin domain of the e. coli dosc - form ii2 (ferrous)
24c1cqxB_



not modelled 98.1 14
PDB header:lipid binding protein
Chain: B: PDB Molecule:flavohemoprotein;
PDBTitle: crystal structure of the flavohemoglobin from alcaligenes eutrophus at2 1.75 a resolution
25d1cqxa1



not modelled 98.1 13
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
26c2veeC_



not modelled 98.1 13
PDB header:transport protein
Chain: C: PDB Molecule:protoglobin;
PDBTitle: structure of protoglobin from methanosarcina acetivorans2 c2a
27d1fsla_



not modelled 98.1 15
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
28d1gvha1



not modelled 98.0 11
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
29d1wmua_



not modelled 98.0 11
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
30d1hlba_



not modelled 98.0 8
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
31c4g1bB_



not modelled 98.0 12
PDB header:oxidoreductase
Chain: B: PDB Molecule:flavohemoglobin;
PDBTitle: x-ray structure of yeast flavohemoglobin in complex with econazole
32c2wy4A_



not modelled 97.9 9
PDB header:oxygen transport
Chain: A: PDB Molecule:single domain haemoglobin;
PDBTitle: structure of bacterial globin from campylobacter jejuni at2 1.35 a resolution
33c1gvhA_



not modelled 97.9 12
PDB header:oxidoreductase
Chain: A: PDB Molecule:flavohemoprotein;
PDBTitle: the x-ray structure of ferric escherichia coli2 flavohemoglobin reveals an unespected geometry of the3 distal heme pocket
34d1vhba_



not modelled 97.9 10
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
35c4uiqA_



not modelled 97.9 13
PDB header:transferase
Chain: A: PDB Molecule:globin-coupled sensor with diguanylate cyclase activity;
PDBTitle: isolated globin domain of the bordetella pertussis globin-2 coupled sensor with a heme at the dimer interface
36d1gcvb_



not modelled 97.9 8
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
37c5oheA_



not modelled 97.8 15
PDB header:transferase
Chain: A: PDB Molecule:globin-coupled histidine kinase;
PDBTitle: globin sensor domain of afgchk (feiii form) in complex with cyanide
38d1hbga_



not modelled 97.8 9
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
39c6o0aA_



not modelled 97.8 18
PDB header:oxidoreductase
Chain: A: PDB Molecule:flavohemoglobin;
PDBTitle: crystal structure of flavohemoglobin from malassezia yamatoensis with2 bound fad and heme determined by iron sad phasing
40d2d5xa1



not modelled 97.8 12
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
41d1jl7a_



not modelled 97.8 8
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
42c3wfwA_



not modelled 97.8 10
PDB header:oxygen transport
Chain: A: PDB Molecule:hemoglobin-like flavoprotein fused to roadblock/lc7 domain;
PDBTitle: crystal structure of the closed form of the hgbrl's globin domain
43d1jeba_



not modelled 97.8 12
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
44c1o1nA_



not modelled 97.7 12
PDB header:oxygen storage/transport
Chain: A: PDB Molecule:hemoglobin alpha chain;
PDBTitle: deoxy hemoglobin (a-glyglygly-c:v1m,l29w; b,d:v1m)
45d2qssa1



not modelled 97.7 12
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
46d3d1ka1



not modelled 97.7 13
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
47d1xq5a_



not modelled 97.6 10
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
48d1qpwa_



not modelled 97.6 13
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
49d1spga_



not modelled 97.6 9
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
50c3bomC_



not modelled 97.6 10
PDB header:oxygen storage/transport
Chain: C: PDB Molecule:hemoglobin subunit alpha-4;
PDBTitle: crystal structure of trout hemoglobin at 1.35 angstrom resolution
51d1hbra_



not modelled 97.6 11
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
52d1jl6a_



not modelled 97.6 7
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
53d1v4wa_



not modelled 97.6 11
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
54d1a4fa_



not modelled 97.6 12
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
55d2gdma_



not modelled 97.6 9
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
56d1fhja_



not modelled 97.6 11
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
57d1q1fa_



not modelled 97.5 7
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
58c3qqrA_



not modelled 97.5 9
PDB header:oxygen transport
Chain: A: PDB Molecule:non-legume hemoglobin;
PDBTitle: crystal structure of parasponia hemoglobin; differential heme2 coordination is linked to quaternary structure
59c3mkbD_



not modelled 97.5 6
PDB header:oxygen storage, oxygen transport
Chain: D: PDB Molecule:hemoglobin subunit beta;
PDBTitle: crystal structure determination of shortfin mako (isurus oxyrinchus)2 hemoglobin at 1.9 angstrom resolution
60d1a6ma_



not modelled 97.5 11
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
61c5jggA_



not modelled 97.5 8
PDB header:oxygen binding/transport protein
Chain: A: PDB Molecule:alpha chain;
PDBTitle: x-ray sequence and high resolution crystal structure of persian2 sturgeon methemoglobin
62d1oj6a_



not modelled 97.5 7
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
63d1cg5a_



not modelled 97.5 10
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
64d1hlma_



not modelled 97.4 12
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
65c2c0kB_



not modelled 97.4 11
PDB header:oxygen transport
Chain: B: PDB Molecule:hemoglobin;
PDBTitle: the structure of hemoglobin from the botfly gasterophilus2 intestinalis
66d1kr7a_



not modelled 97.4 16
Fold:Globin-like
Superfamily:Globin-like
Family:Nerve tissue mini-hemoglobin (neural globin)
67d1hdsa_



not modelled 97.4 10
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
68d2dn3a1



not modelled 97.4 10
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
69d1scta_



not modelled 97.4 11
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
70c4b4yA_



not modelled 97.3 13
PDB header:transport protein
Chain: A: PDB Molecule:neuroglobin;
PDBTitle: crystal structure of the neuroglobin from the photosymbiotic2 marine acoel symsagittifera roscoffensis
71d1outa_



not modelled 97.3 12
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
72d1itha_



not modelled 97.3 7
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
73d1gcva_



not modelled 97.3 8
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
74d1a9we_



not modelled 97.3 6
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
75c3wctA_



not modelled 97.3 10
PDB header:oxygen transport
Chain: A: PDB Molecule:a1 globin chain of giant v2 hemoglobin;
PDBTitle: the structure of a deoxygenated 400 kda hemoglobin provides a more2 accurate description of the cooperative mechanism of giant3 hemoglobins: oxygenated form
76d1x9fb_



not modelled 97.3 15
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
77d1sctb_



not modelled 97.3 10
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
78c2d2mB_



not modelled 97.2 13
PDB header:oxygen storage/transport
Chain: B: PDB Molecule:giant hemoglobin, a2(a5) globin chain;
PDBTitle: structure of an extracellular giant hemoglobin of the2 gutless beard worm oligobrachia mashikoi
79d1lhta_



not modelled 97.2 8
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
80c1yhuA_



not modelled 97.2 13
PDB header:oxygen storage/transport
Chain: A: PDB Molecule:hemoglobin a1 chain;
PDBTitle: crystal structure of riftia pachyptila c1 hemoglobin reveals novel2 assembly of 24 subunits.
81d1mwca_



not modelled 97.2 11
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
82c3pt8B_



not modelled 97.2 6
PDB header:oxygen transport
Chain: B: PDB Molecule:hemoglobin iii;
PDBTitle: structure of hbii-iii-cn from lucina pectinata at ph 5.0
83d1mbsa_



not modelled 97.2 10
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
84d2mm1a_



not modelled 97.1 11
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
85d1mbaa_



not modelled 97.1 11
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
86c1x46A_



not modelled 97.1 5
PDB header:oxygen storage/transport
Chain: A: PDB Molecule:hemoglobin component vii;
PDBTitle: crystal structure of a hemoglobin component (ta-vii) from2 tokunagayusurika akamusi
87d1fhjb_



not modelled 97.1 6
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
88c2wtgA_



not modelled 97.1 14
PDB header:oxygen transport
Chain: A: PDB Molecule:globin-like protein;
PDBTitle: high resolution 3d structure of c.elegans globin-like2 protein glb-1
89d1x9fd_



not modelled 97.1 12
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
90d1hbrb_



not modelled 97.1 7
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
91d3bj1b1



not modelled 97.0 12
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
92d1jebb_



not modelled 97.0 7
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
93c1yhuJ_



not modelled 97.0 12
PDB header:oxygen storage/transport
Chain: J: PDB Molecule:giant hemoglobins b chain;
PDBTitle: crystal structure of riftia pachyptila c1 hemoglobin reveals novel2 assembly of 24 subunits.
94d2qssb1



not modelled 97.0 6
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
95c2zs0A_



not modelled 97.0 16
PDB header:oxygen storage, oxygen transport
Chain: A: PDB Molecule:extracellular giant hemoglobin major globin subunit a1;
PDBTitle: structural basis for the heterotropic and homotropic interactions of2 invertebrate giant hemoglobin
96d2h8fb1



not modelled 97.0 10
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
97c5jggB_



not modelled 97.0 5
PDB header:oxygen binding/transport protein
Chain: B: PDB Molecule:beta chain;
PDBTitle: x-ray sequence and high resolution crystal structure of persian2 sturgeon methemoglobin
98d1x9fc_



not modelled 97.0 13
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
99d1asha_



not modelled 97.0 16
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
100d1i3da_



not modelled 97.0 8
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
101d1cg5b_



not modelled 97.0 11
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
102d3d1kb1



not modelled 97.0 9
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
103d1outb_



not modelled 96.9 10
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
104d1hdsb_



not modelled 96.9 9
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
105c1yhuW_



not modelled 96.9 10
PDB header:oxygen storage/transport
Chain: W: PDB Molecule:hemoglobin b1a chain;
PDBTitle: crystal structure of riftia pachyptila c1 hemoglobin reveals novel2 assembly of 24 subunits.
106d1d8ua_



not modelled 96.9 11
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
107d1h97a_



not modelled 96.9 9
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
108c2d2mC_



not modelled 96.9 12
PDB header:oxygen storage/transport
Chain: C: PDB Molecule:giant hemoglobin, b2(c) globin chain;
PDBTitle: structure of an extracellular giant hemoglobin of the2 gutless beard worm oligobrachia mashikoi
109d1ch4a_



not modelled 96.8 7
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
110c2olpB_



not modelled 96.8 6
PDB header:oxygen storage/transport
Chain: B: PDB Molecule:hemoglobin ii;
PDBTitle: structure and ligand selection of hemoglobin ii from lucina pectinata
111c2bk9A_



not modelled 96.8 9
PDB header:oxygen transport
Chain: A: PDB Molecule:cg9734-pa;
PDBTitle: drosophila melanogaster globin
112d2d5xb1



not modelled 96.8 5
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
113c3wctD_



not modelled 96.8 12
PDB header:oxygen transport
Chain: D: PDB Molecule:b1 globin chain of giant v2 hemoglobin;
PDBTitle: the structure of a deoxygenated 400 kda hemoglobin provides a more2 accurate description of the cooperative mechanism of giant3 hemoglobins: oxygenated form
114c2vywA_



not modelled 96.8 8
PDB header:oxygen binding
Chain: A: PDB Molecule:hemoglobin;
PDBTitle: hemoglobin (hb2) from trematode fasciola hepatica
115d2aa1b1



not modelled 96.8 12
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
116d2v1fa1



not modelled 96.7 9
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
117d1a4fb_



not modelled 96.7 8
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
118d1x9fa_



not modelled 96.7 11
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
119d2dn3b1



not modelled 96.7 7
Fold:Globin-like
Superfamily:Globin-like
Family:Globins
120d1shrb_



not modelled 96.7 6
Fold:Globin-like
Superfamily:Globin-like
Family:Globins

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