Phyre Home Retrieve Phyre Job Id
Emailmdejesus@rockefeller.edu
DescriptionRVBD2474c_(-)_2776326_2776979
DateWed Aug 7 12:50:10 BST 2019
Unique Job IDaf88821577a8e22a
SequenceVVERGLWLPD ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:18.410 Y:35.762 Z:44.678
Model (left) based on template c1avyA_
Top template information
PDB header:coiled coil
Chain: A: PDB Molecule:fibritin;
PDBTitle: fibritin deletion mutant m (bacteriophage t4)
Confidence and coverage
Confidence: 45.9% Coverage: 16%
34 residues ( 16% of your sequence) have been modelled with 45.9% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c1avyA_



45.9 26
PDB header:coiled coil
Chain: A: PDB Molecule:fibritin;
PDBTitle: fibritin deletion mutant m (bacteriophage t4)
2c3g80B_



25.3 32
PDB header:viral protein
Chain: B: PDB Molecule:protein b2;
PDBTitle: nodamura virus protein b2, rna-binding domain
3c1rfoC_



22.9 24
PDB header:viral protein
Chain: C: PDB Molecule:whisker antigen control protein;
PDBTitle: trimeric foldon of the t4 phagehead fibritin
4c2lp7C_



17.6 28
PDB header:viral protein
Chain: C: PDB Molecule:envelope glycoprotein;
PDBTitle: structure of gp41-m-mat, a membrane associated mper trimer from hiv-12 gp41.
5c1aa0A_



17.4 26
PDB header:attachment protein
Chain: A: PDB Molecule:fibritin;
PDBTitle: fibritin deletion mutant e (bacteriophage t4)
6c1ox3A_



13.7 17
PDB header:chaperone
Chain: A: PDB Molecule:fibritin;
PDBTitle: crystal structure of mini-fibritin
7d1k4na_



11.6 25
Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Family:Hypothetical protein YecM (EC4020)
8c2knrA_



10.4 12
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein atc0905;
PDBTitle: solution structure of protein atu0922 from a. tumefaciens. northeast2 structural genomics consortium target att13. ontario center for3 structural proteomics target atc0905
9c5o31Z_



9.8 33
PDB header:oxidoreductase
Chain: Z: PDB Molecule:nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit
PDBTitle: mitochondrial complex i in the deactive state
10c6gcsW_



9.1 36
PDB header:oxidoreductase
Chain: W: PDB Molecule:nb6m subunit;
PDBTitle: cryo-em structure of respiratory complex i from yarrowia lipolytica
11c2mckA_



8.9 75
PDB header:hydrolase
Chain: A: PDB Molecule:polyprotein;
PDBTitle: backbone 1h, 13c, and 15n chemical shift assignments for murine2 norovirus cr6 ns1/2 protein
12c5lnkq_



7.7 36
PDB header:oxidoreductase
Chain: Q: PDB Molecule:
PDBTitle: entire ovine respiratory complex i
13d1gsma1



7.3 33
Fold:Immunoglobulin-like beta-sandwich
Superfamily:Immunoglobulin
Family:I set domains
14d1kbla2



6.7 20
Fold:The "swivelling" beta/beta/alpha domain
Superfamily:Phosphohistidine domain
Family:Pyruvate phosphate dikinase, central domain
15c2gqcA_



6.6 21
PDB header:hydrolase
Chain: A: PDB Molecule:rhomboid intramembrane protease;
PDBTitle: solution structure of the n-terminal domain of rhomboid intramembrane2 protease from p. aeruginosa
16c1v1cA_



6.6 25
PDB header:sh3-domain
Chain: A: PDB Molecule:obscurin;
PDBTitle: solution structure of the sh3 domain of obscurin
17c3mwzA_



6.3 15
PDB header:hydrolase inhibitor
Chain: A: PDB Molecule:sialostatin l2;
PDBTitle: crystal structure of the selenomethionine derivative of the l 22,47,2 100 m mutant of sialostatin l2
18c1r7cA_



5.6 67
PDB header:membrane protein
Chain: A: PDB Molecule:genome polyprotein;
PDBTitle: nmr structure of the membrane anchor domain (1-31) of the2 nonstructural protein 5a (ns5a) of hepatitis c virus3 (minimized average structure, sample in 50% tfe)
19c1r7gA_



5.6 67
PDB header:membrane protein
Chain: A: PDB Molecule:genome polyprotein;
PDBTitle: nmr structure of the membrane anchor domain (1-31) of the2 nonstructural protein 5a (ns5a) of hepatitis c virus3 (minimized average structure, sample in 100mm dpc)
20c4goqD_



5.5 20
PDB header:structural genomics, unknown function
Chain: D: PDB Molecule:hypothetical protein;
PDBTitle: crystal structure of a duf1491 family protein (cc_1065) from2 caulobacter crescentus cb15 at 1.87 a resolution
21d2pstx1



not modelled 5.5 17
Fold:MbtH/L9 domain-like
Superfamily:MbtH-like
Family:MbtH-like
22d3ci0k1



not modelled 5.4 30
Fold:SAM domain-like
Superfamily:GspK insert domain-like
Family:GspK insert domain-like
23c5xtbW_



not modelled 5.1 33
PDB header:oxidoreductase/electron transport
Chain: W: PDB Molecule:nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit
PDBTitle: cryo-em structure of human respiratory complex i matrix arm

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